RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W TSA1P34760 196 aaKnown RBP2.21□□□□□ -2.06
APL1YJR005W ARL1P38116 183 aaKnown RBP2.21□□□□□ -2.06
APL1YJR005W PEX28P38848 579 aa2.21□□□□□ -2.06
APL1YJR005W YLR257WQ06146 321 aaKnown RBP2.21□□□□□ -2.06
APL1YJR005W NSI1Q12457 570 aa2.21□□□□□ -2.06
APL1YJR005W GCD6P32501 712 aaKnown RBP2.21□□□□□ -2.06
APL1YJR005W VPS35P34110 944 aa2.21□□□□□ -2.06
APL1YJR005W RSA3Q05942 220 aaKnown RBP2.21□□□□□ -2.06
APL1YJR005W CDA2Q06703 312 aa2.21□□□□□ -2.06
APL1YJR005W YDL177CQ12257 170 aa2.21□□□□□ -2.06
APL1YJR005W SAM35P14693 329 aa2.2□□□□□ -2.06
APL1YJR005W SQT1P35184 431 aa2.2□□□□□ -2.06
APL1YJR005W RDH54P38086 958 aa2.2□□□□□ -2.06
APL1YJR005W SHU2P38957 223 aa2.2□□□□□ -2.06
APL1YJR005W UBP5P39944 805 aa2.2□□□□□ -2.06
APL1YJR005W PIC2P40035 300 aa2.2□□□□□ -2.06
APL1YJR005W MTR4P47047 1073 aaKnown RBP2.2□□□□□ -2.06
APL1YJR005W YJL045WP47052 634 aa2.2□□□□□ -2.06
APL1YJR005W ECL1P48235 211 aa2.2□□□□□ -2.06
APL1YJR005W YGL140CP53120 1219 aa2.2□□□□□ -2.06
APL1YJR005W SEN54Q02825 467 aaPredicted RBP2.2□□□□□ -2.06
APL1YJR005W YPL109CQ02981 657 aa2.2□□□□□ -2.06
APL1YJR005W ETP1P38748 585 aaKnown RBP2.2□□□□□ -2.06
APL1YJR005W STM1P39015 273 aaKnown RBP2.2□□□□□ -2.06
APL1YJR005W HXK1P04806 485 aaKnown RBP2.19□□□□□ -2.06
APL1YJR005W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06 RIP-Chip
APL1YJR005W DED1P06634 604 aaKnown RBP2.19□□□□□ -2.06
APL1YJR005W VMA4P22203 233 aaKnown RBP2.19□□□□□ -2.06
APL1YJR005W AFG2P32794 780 aa2.19□□□□□ -2.06
APL1YJR005W ORC3P54790 616 aa2.19□□□□□ -2.06
APL1YJR005W ADI1Q03677 179 aa2.19□□□□□ -2.06
APL1YJR005W RCL1Q08096 367 aaPredicted RBP2.19□□□□□ -2.06
APL1YJR005W THI80P35202 319 aa2.18□□□□□ -2.06
APL1YJR005W YHL012WP38709 493 aa2.18□□□□□ -2.06
APL1YJR005W GPB2P39717 880 aa2.18□□□□□ -2.06
APL1YJR005W TAF1P46677 1066 aa2.18□□□□□ -2.06
APL1YJR005W PRP43P53131 767 aaKnown RBP2.18□□□□□ -2.06
APL1YJR005W OXR1Q08952 273 aa2.18□□□□□ -2.06
APL1YJR005W KAR2P16474 682 aaKnown RBP2.18□□□□□ -2.06
APL1YJR005W QNS1P38795 714 aaKnown RBP2.18□□□□□ -2.06
APL1YJR005W NIT1P40447 199 aa2.18□□□□□ -2.06
APL1YJR005W SEC23P15303 768 aaKnown RBP2.17□□□□□ -2.06
APL1YJR005W ATE1P16639 503 aa2.17□□□□□ -2.06
APL1YJR005W MCM2P29469 868 aa2.17□□□□□ -2.06
APL1YJR005W AIM26P32858 118 aa2.17□□□□□ -2.06
APL1YJR005W ADD66P36040 267 aa2.17□□□□□ -2.06
APL1YJR005W AIM3P38266 947 aaKnown RBP2.17□□□□□ -2.06
APL1YJR005W YFL054CP43549 646 aa2.17□□□□□ -2.06
APL1YJR005W MRPL22P53881 309 aa2.17□□□□□ -2.06
APL1YJR005W HDA2Q06629 674 aa2.17□□□□□ -2.06
APL1YJR005W LAP2Q10740 671 aa2.17□□□□□ -2.06
APL1YJR005W KIP1P28742 1111 aa2.17□□□□□ -2.06
APL1YJR005W RPS26AP39938 119 aaKnown RBP2.17□□□□□ -2.06
APL1YJR005W RPS26BP39939 119 aaKnown RBP2.17□□□□□ -2.06
APL1YJR005W RAT1Q02792 1006 aaKnown RBP2.17□□□□□ -2.06
APL1YJR005W ROD1Q02805 837 aa2.17□□□□□ -2.06
APL1YJR005W SPR28Q04921 423 aa2.17□□□□□ -2.06
APL1YJR005W EST2Q06163 884 aa2.17□□□□□ -2.06
APL1YJR005W YSC84P32793 468 aa2.16□□□□□ -2.06
APL1YJR005W ALG3P38179 458 aa2.16□□□□□ -2.06
APL1YJR005W ATG14P38270 344 aa2.16□□□□□ -2.06
APL1YJR005W HSE1P38753 452 aa2.16□□□□□ -2.06
APL1YJR005W HRK1Q08732 759 aaKnown RBP2.16□□□□□ -2.06
APL1YJR005W SPO21Q12411 609 aa2.16□□□□□ -2.06
APL1YJR005W PRP6P19735 899 aaPredicted RBP2.15□□□□□ -2.06
APL1YJR005W PRE9P23638 258 aaKnown RBP2.15□□□□□ -2.06
APL1YJR005W SEC20P28791 383 aa2.15□□□□□ -2.06
APL1YJR005W MDL2P33311 773 aa2.15□□□□□ -2.06
APL1YJR005W YGR122WP53272 402 aa2.15□□□□□ -2.06
APL1YJR005W RKM2Q03942 479 aa2.15□□□□□ -2.06
APL1YJR005W ESC8Q08119 714 aa2.15□□□□□ -2.06
APL1YJR005W PTC5Q12511 572 aa2.15□□□□□ -2.06
APL1YJR005W RAD2P07276 1031 aa2.15□□□□□ -2.07
APL1YJR005W CYC8P14922 966 aa2.15□□□□□ -2.07
APL1YJR005W YCR015CP25616 317 aa2.15□□□□□ -2.07
APL1YJR005W HXT13P39924 564 aa2.15□□□□□ -2.07
APL1YJR005W FYV10P40492 516 aa2.15□□□□□ -2.07
APL1YJR005W HXT17P53631 564 aa2.15□□□□□ -2.07
APL1YJR005W HXT15P54854 567 aa2.15□□□□□ -2.07
APL1YJR005W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
APL1YJR005W RSC58Q07979 502 aa2.15□□□□□ -2.07
APL1YJR005W MKK2P32491 506 aa2.14□□□□□ -2.07
APL1YJR005W YKL222CP35995 705 aa2.14□□□□□ -2.07
APL1YJR005W ABZ1P37254 787 aaPredicted RBP2.14□□□□□ -2.07
APL1YJR005W FLR1P38124 548 aa2.14□□□□□ -2.07
APL1YJR005W VPS53P47061 822 aa2.14□□□□□ -2.07
APL1YJR005W POL32P47110 350 aa2.14□□□□□ -2.07
APL1YJR005W GNP1P48813 663 aa2.14□□□□□ -2.07
APL1YJR005W YPL277CQ08989 487 aa2.14□□□□□ -2.07
APL1YJR005W GCR1P07261 785 aa2.14□□□□□ -2.07
APL1YJR005W TOD6P34219 525 aa2.14□□□□□ -2.07
APL1YJR005W GIP4P39732 760 aa2.14□□□□□ -2.07
APL1YJR005W MRPS18P42847 217 aa2.14□□□□□ -2.07
APL1YJR005W RRP15Q06511 250 aaPredicted RBP2.14□□□□□ -2.07
APL1YJR005W MRL1Q06815 381 aa2.14□□□□□ -2.07
APL1YJR005W RPS13P05756 151 aaKnown RBP2.13□□□□□ -2.07
APL1YJR005W SPS1P08458 490 aa2.13□□□□□ -2.07
APL1YJR005W SNF5P18480 905 aa2.13□□□□□ -2.07
APL1YJR005W SRO9P25567 434 aaKnown RBP2.13□□□□□ -2.07
APL1YJR005W YML020WQ03722 664 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms