RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W ATG36P46983 293 aa6.3□□□□□ -1.4
DEG1YFL001W YGR125WP53273 1036 aa6.3□□□□□ -1.4
DEG1YFL001W TOP1P04786 769 aa6.29□□□□□ -1.4
DEG1YFL001W HVG1P0CE11 249 aa6.29□□□□□ -1.4
DEG1YFL001W HSP60P19882 572 aaKnown RBP6.29□□□□□ -1.4
DEG1YFL001W GRX4P32642 244 aa6.29□□□□□ -1.4
DEG1YFL001W VBA5P36172 582 aa6.29□□□□□ -1.4
DEG1YFL001W SEA4P38164 1038 aa6.29□□□□□ -1.4
DEG1YFL001W MSH4P40965 878 aaPredicted RBP6.29□□□□□ -1.4
DEG1YFL001W REC8Q12188 680 aa6.29□□□□□ -1.4
DEG1YFL001W CIT1P00890 479 aa6.28□□□□□ -1.4
DEG1YFL001W SSB1P11484 613 aaKnown RBP6.28□□□□□ -1.4
DEG1YFL001W THI4P32318 326 aa6.28□□□□□ -1.4
DEG1YFL001W ABD1P32783 436 aaPredicted RBP6.28□□□□□ -1.4
DEG1YFL001W EXO5P38289 585 aa6.28□□□□□ -1.4
DEG1YFL001W MCX1P38323 520 aaPredicted RBP6.28□□□□□ -1.4
DEG1YFL001W SSB2P40150 613 aaKnown RBP6.28□□□□□ -1.4
DEG1YFL001W ESC2Q06340 456 aa6.28□□□□□ -1.4
DEG1YFL001W CAN1P04817 590 aa6.27□□□□□ -1.41
DEG1YFL001W ERR1P0CX10 437 aa6.27□□□□□ -1.41
DEG1YFL001W ERR2P0CX11 437 aa6.27□□□□□ -1.41
DEG1YFL001W VMA4P22203 233 aaKnown RBP6.27□□□□□ -1.41
DEG1YFL001W PBY1P38254 753 aa6.27□□□□□ -1.41
DEG1YFL001W AMN1P38285 549 aaPredicted RBP6.27□□□□□ -1.41
DEG1YFL001W INP51P40559 946 aaKnown RBP6.27□□□□□ -1.41
DEG1YFL001W PFD1P46988 109 aa6.27□□□□□ -1.41
DEG1YFL001W ERP6P53198 216 aa6.27□□□□□ -1.41
DEG1YFL001W BIO5P53744 561 aaKnown RBP6.27□□□□□ -1.41
DEG1YFL001W HEH2Q03281 663 aa6.27□□□□□ -1.41
DEG1YFL001W YJR008WP47085 338 aa6.26□□□□□ -1.41
DEG1YFL001W UTP8P53276 713 aaKnown RBP6.26□□□□□ -1.41
DEG1YFL001W ROD1Q02805 837 aa6.26□□□□□ -1.41
DEG1YFL001W YLR225CQ05948 407 aaKnown RBP6.26□□□□□ -1.41
DEG1YFL001W YKL077WP36081 392 aa6.25□□□□□ -1.41
DEG1YFL001W TFA2P36145 328 aa6.25□□□□□ -1.41
DEG1YFL001W UBP12P39538 1254 aa6.25□□□□□ -1.41
DEG1YFL001W RTS3P53289 263 aa6.25□□□□□ -1.41
DEG1YFL001W YNR014WP53719 212 aa6.25□□□□□ -1.41
DEG1YFL001W EAF1Q06337 982 aa6.25□□□□□ -1.41
DEG1YFL001W SOG2Q08817 791 aa6.25□□□□□ -1.41
DEG1YFL001W NOP14Q99207 810 aaKnown RBP6.25□□□□□ -1.41
DEG1YFL001W HTS1P07263 546 aaKnown RBP6.25□□□□□ -1.41
DEG1YFL001W INO1P11986 533 aa6.25□□□□□ -1.41
DEG1YFL001W MKK2P32491 506 aa6.25□□□□□ -1.41
DEG1YFL001W YJL181WP46987 611 aa6.25□□□□□ -1.41
DEG1YFL001W YJR124CP47159 448 aa6.25□□□□□ -1.41
DEG1YFL001W TAF8Q03750 510 aa6.25□□□□□ -1.41
DEG1YFL001W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41 RIP-Chip
DEG1YFL001W ARE1P25628 610 aa6.24□□□□□ -1.41
DEG1YFL001W MSH2P25847 964 aa6.24□□□□□ -1.41
DEG1YFL001W MSC7P38694 644 aa6.24□□□□□ -1.41
DEG1YFL001W YNR065CP53751 1116 aa6.24□□□□□ -1.41
DEG1YFL001W DNM1P54861 757 aa6.24□□□□□ -1.41
DEG1YFL001W EST2Q06163 884 aa6.24□□□□□ -1.41
DEG1YFL001W TY1A-LR4P0C2I8 440 aaKnown RBP6.23□□□□□ -1.41
DEG1YFL001W TY1A-DR6P0CX70 440 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-ER1P0CX71 440 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-LR2P0CX72 440 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-PLP0CX73 440 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-JR1P0CX74 440 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-LR3P0CX75 440 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-ML2P0CX76 440 aa6.23□□□□□ -1.41
DEG1YFL001W PRP9P19736 530 aaKnown RBP6.23□□□□□ -1.41
DEG1YFL001W SRM1P21827 482 aa6.23□□□□□ -1.41
DEG1YFL001W PIN4P34217 668 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
DEG1YFL001W MOT2P34909 587 aaKnown RBP6.23□□□□□ -1.41
DEG1YFL001W HUL4P40985 892 aa6.23□□□□□ -1.41
DEG1YFL001W FET4P40988 552 aa6.23□□□□□ -1.41
DEG1YFL001W LSB6P42951 607 aa6.23□□□□□ -1.41
DEG1YFL001W RTA1P53047 317 aa6.23□□□□□ -1.41
DEG1YFL001W TIF35Q04067 274 aaKnown RBP6.23□□□□□ -1.41
DEG1YFL001W TY1A-GR1Q12085 440 aa6.23□□□□□ -1.41
DEG1YFL001W RKM4Q12504 494 aa6.23□□□□□ -1.41
DEG1YFL001W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.23□□□□□ -1.41
DEG1YFL001W TY1A-OLQ92392 440 aaKnown RBP6.23□□□□□ -1.41
DEG1YFL001W YCK2P23292 546 aaKnown RBP6.22□□□□□ -1.41
DEG1YFL001W SYP1P25623 870 aaKnown RBP6.22□□□□□ -1.41
DEG1YFL001W NEM1P38757 446 aa6.22□□□□□ -1.41
DEG1YFL001W DED1P06634 604 aaKnown RBP6.21□□□□□ -1.42
DEG1YFL001W DBP5P20449 482 aaKnown RBP6.21□□□□□ -1.42
DEG1YFL001W PUF4P25339 888 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42 RIP-Chip
DEG1YFL001W ADD66P36040 267 aa6.21□□□□□ -1.42
DEG1YFL001W CRP1P38845 465 aaKnown RBP6.21□□□□□ -1.42
DEG1YFL001W SNF7P39929 240 aaKnown RBP6.21□□□□□ -1.42
DEG1YFL001W CNN1P43618 361 aa6.21□□□□□ -1.42
DEG1YFL001W UTP5Q04177 643 aaKnown RBP6.21□□□□□ -1.42
DEG1YFL001W NTG2Q08214 380 aa6.21□□□□□ -1.42
DEG1YFL001W MRP10O75012 95 aa6.2□□□□□ -1.42
DEG1YFL001W GPM1P00950 247 aaKnown RBP6.2□□□□□ -1.42
DEG1YFL001W YKL107WP34251 309 aa6.2□□□□□ -1.42
DEG1YFL001W PRK1P40494 810 aa6.2□□□□□ -1.42
DEG1YFL001W ALR2P43553 858 aa6.2□□□□□ -1.42
DEG1YFL001W MTR4P47047 1073 aaKnown RBP6.2□□□□□ -1.42
DEG1YFL001W GUP1P53154 560 aa6.2□□□□□ -1.42
DEG1YFL001W UTP22P53254 1237 aaPredicted RBP6.2□□□□□ -1.42
DEG1YFL001W RAT1Q02792 1006 aaKnown RBP6.2□□□□□ -1.42
DEG1YFL001W YIG1Q08956 461 aa6.2□□□□□ -1.42
DEG1YFL001W YPL066WQ12194 479 aa6.2□□□□□ -1.42
DEG1YFL001W BET3P36149 193 aa6.19□□□□□ -1.42
DEG1YFL001W ARL1P38116 183 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms