RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 LAMC1P11047 1609 aa15.38■□□□□ 0.05
CASC19-229ENST00000641418 PPP1R3GB7ZBB8 358 aa15.37■□□□□ 0.05
CASC19-229ENST00000641418 TRPC5Q9UL62 973 aaPredicted RBP15.37■□□□□ 0.05
CASC19-229ENST00000641418 NRXN1Q9ULB1 1477 aa15.37■□□□□ 0.05
CASC19-229ENST00000641418 HRCP23327 699 aa15.36■□□□□ 0.05
CASC19-229ENST00000641418 MARVELD3Q96A59 401 aa15.36■□□□□ 0.05
CASC19-229ENST00000641418 PRAM1Q96QH2 718 aa15.36■□□□□ 0.05
CASC19-229ENST00000641418 MYOM2P54296 1465 aa15.36■□□□□ 0.05
CASC19-229ENST00000641418 PXDNQ92626 1479 aa15.35■□□□□ 0.05
CASC19-229ENST00000641418 FECHP22830 423 aa15.35■□□□□ 0.05
CASC19-229ENST00000641418 PRSS12P56730 875 aa15.35■□□□□ 0.05
CASC19-229ENST00000641418 KRT28Q7Z3Y7 464 aa15.35■□□□□ 0.05
CASC19-229ENST00000641418 POGKQ9P215 609 aa15.35■□□□□ 0.05
CASC19-229ENST00000641418 SPATA31A3Q5VYP0 1347 aa15.34■□□□□ 0.05
CASC19-229ENST00000641418 SAFB2Q14151 953 aaKnown RBP eCLIP15.34■□□□□ 0.05
CASC19-229ENST00000641418 STAC3Q96MF2 364 aa15.34■□□□□ 0.05
CASC19-229ENST00000641418 RGS12O14924 1447 aa15.33■□□□□ 0.04
CASC19-229ENST00000641418 FAM205CA6NFA0 338 aa15.33■□□□□ 0.04
CASC19-229ENST00000641418 PBX2P40425 430 aa15.33■□□□□ 0.04
CASC19-229ENST00000641418 PSME1Q06323 249 aa15.33■□□□□ 0.04
CASC19-229ENST00000641418 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
CASC19-229ENST00000641418 CCDC102AQ96A19 550 aa15.33■□□□□ 0.04
CASC19-229ENST00000641418 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
CASC19-229ENST00000641418 KCNK17Q96T54 332 aa15.32■□□□□ 0.04
CASC19-229ENST00000641418 IFT172Q9UG01 1749 aa15.32■□□□□ 0.04
CASC19-229ENST00000641418 ARHGAP33O14559 1287 aa15.31■□□□□ 0.04
CASC19-229ENST00000641418 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
CASC19-229ENST00000641418 TRIM66O15016 1216 aa15.3■□□□□ 0.04
CASC19-229ENST00000641418 COL9A1P20849 921 aa15.3■□□□□ 0.04
CASC19-229ENST00000641418 PADI6Q6TGC4 694 aa15.3■□□□□ 0.04
CASC19-229ENST00000641418 ZNF687Q8N1G0 1237 aa15.3■□□□□ 0.04
CASC19-229ENST00000641418 ATRNO75882 1429 aa15.3■□□□□ 0.04
CASC19-229ENST00000641418 OATP04181 439 aa15.29■□□□□ 0.04
CASC19-229ENST00000641418 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
CASC19-229ENST00000641418 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
CASC19-229ENST00000641418 KNDC1Q76NI1 1749 aa15.28■□□□□ 0.04
CASC19-229ENST00000641418 TTC13Q8NBP0 860 aa15.28■□□□□ 0.04
CASC19-229ENST00000641418 ONECUT3O60422 494 aaPredicted RBP15.27■□□□□ 0.04
CASC19-229ENST00000641418 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.04
CASC19-229ENST00000641418 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
CASC19-229ENST00000641418 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
CASC19-229ENST00000641418 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
CASC19-229ENST00000641418 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
CASC19-229ENST00000641418 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
CASC19-229ENST00000641418 SBNO1A3KN83 1393 aa15.26■□□□□ 0.03
CASC19-229ENST00000641418 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
CASC19-229ENST00000641418 HS3ST6Q96QI5 342 aa15.25■□□□□ 0.03
CASC19-229ENST00000641418 ANKARQ7Z5J8 1434 aa15.25■□□□□ 0.03
CASC19-229ENST00000641418 ADGRB1O14514 1584 aa15.25■□□□□ 0.03
CASC19-229ENST00000641418 PACS2Q86VP3 889 aa15.24■□□□□ 0.03
CASC19-229ENST00000641418 CABLES1Q8TDN4 633 aa15.24■□□□□ 0.03
CASC19-229ENST00000641418 FMN2Q9NZ56 1722 aa15.24■□□□□ 0.03
CASC19-229ENST00000641418 TNS3Q68CZ2 1445 aa15.24■□□□□ 0.03
CASC19-229ENST00000641418 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
CASC19-229ENST00000641418 PDE4DQ08499 809 aa15.24■□□□□ 0.03
CASC19-229ENST00000641418 ARHGEF10O15013 1369 aa15.23■□□□□ 0.03
CASC19-229ENST00000641418 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
CASC19-229ENST00000641418 TRIM6-TRIM34B2RNG4 842 aa15.23■□□□□ 0.03
CASC19-229ENST00000641418 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
CASC19-229ENST00000641418 AMHR2Q16671 573 aa15.23■□□□□ 0.03
CASC19-229ENST00000641418 RBM46Q8TBY0 533 aaKnown RBP15.23■□□□□ 0.03
CASC19-229ENST00000641418 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
CASC19-229ENST00000641418 SLIT2O94813 1529 aa15.22■□□□□ 0.03
CASC19-229ENST00000641418 SLC4A5Q9BY07 1137 aa15.22■□□□□ 0.03
CASC19-229ENST00000641418 ADGRG1Q9Y653 693 aa15.22■□□□□ 0.03
CASC19-229ENST00000641418 PRR36Q9H6K5 1346 aa15.21■□□□□ 0.03
CASC19-229ENST00000641418 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.03
CASC19-229ENST00000641418 PSEN2P49810 448 aa15.21■□□□□ 0.02
CASC19-229ENST00000641418 LCE2DQ5TA82 110 aaPredicted RBP15.21■□□□□ 0.02
CASC19-229ENST00000641418 CCDC125Q86Z20 511 aa15.2■□□□□ 0.02
CASC19-229ENST00000641418 ZBED2Q9BTP6 218 aa15.2■□□□□ 0.02
CASC19-229ENST00000641418 FAM83GA6ND36 823 aa15.19■□□□□ 0.02
CASC19-229ENST00000641418 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
CASC19-229ENST00000641418 VPS72Q15906 364 aa15.19■□□□□ 0.02
CASC19-229ENST00000641418 NGDNQ8NEJ9 315 aaKnown RBP15.19■□□□□ 0.02
CASC19-229ENST00000641418 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
CASC19-229ENST00000641418 METTL3Q86U44 580 aaKnown RBP15.18■□□□□ 0.02
CASC19-229ENST00000641418 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
CASC19-229ENST00000641418 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
CASC19-229ENST00000641418 ADGRB2O60241 1585 aa15.17■□□□□ 0.02
CASC19-229ENST00000641418 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
CASC19-229ENST00000641418 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
CASC19-229ENST00000641418 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
CASC19-229ENST00000641418 PXYLP1Q8TE99 480 aa15.16■□□□□ 0.02
CASC19-229ENST00000641418 AXIN2Q9Y2T1 843 aa15.16■□□□□ 0.02
CASC19-229ENST00000641418 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
CASC19-229ENST00000641418 PROX2Q3B8N5 592 aa15.15■□□□□ 0.02
CASC19-229ENST00000641418 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
CASC19-229ENST00000641418 CDK19Q9BWU1 502 aa15.15■□□□□ 0.02
CASC19-229ENST00000641418 CLCN1P35523 988 aa15.14■□□□□ 0.01
CASC19-229ENST00000641418 TTLL12Q14166 644 aaPredicted RBP15.14■□□□□ 0.01
CASC19-229ENST00000641418 FAM198AQ9UFP1 575 aa15.14■□□□□ 0.01
CASC19-229ENST00000641418 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
CASC19-229ENST00000641418 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
CASC19-229ENST00000641418 NBPF1Q3BBV0 1214 aa15.13■□□□□ 0.01
CASC19-229ENST00000641418 TATDN2Q93075 761 aa15.13■□□□□ 0.01
CASC19-229ENST00000641418 BTG4Q9NY30 223 aa15.13■□□□□ 0.01
CASC19-229ENST00000641418 RABGEF1Q9UJ41 708 aa15.13■□□□□ 0.01
CASC19-229ENST00000641418 POTEB3A0JP26 581 aa15.12■□□□□ 0.01
CASC19-229ENST00000641418 POTEBQ6S5H4 581 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms