RNA–Protein interactions for RNA: ENST00000641005.1

SAMMSON-203, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 2,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-203ENST00000641005 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
SAMMSON-203ENST00000641005 PARP4Q9UKK3 1724 aaKnown RBP9.98□□□□□ -0.81
SAMMSON-203ENST00000641005 DDB1Q16531 1140 aa9.98□□□□□ -0.81
SAMMSON-203ENST00000641005 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
SAMMSON-203ENST00000641005 RAPGEF4Q8WZA2 1011 aa9.98□□□□□ -0.81
SAMMSON-203ENST00000641005 SHANK3Q9BYB0 1731 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 PHACTR3Q96KR7 559 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 OVOS2A0A0G2JMS6 1433 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 KDRP35968 1356 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 TATP17735 454 aaPredicted RBP9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 PTF1AQ7RTS3 328 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
SAMMSON-203ENST00000641005 EXOC5O00471 708 aa9.96□□□□□ -0.82
SAMMSON-203ENST00000641005 MRS2Q9HD23 443 aa9.96□□□□□ -0.82
SAMMSON-203ENST00000641005 TNS2Q63HR2 1409 aa9.96□□□□□ -0.82
SAMMSON-203ENST00000641005 CYP27B1O15528 508 aa9.95□□□□□ -0.82
SAMMSON-203ENST00000641005 PRKAR2BP31323 418 aa9.95□□□□□ -0.82
SAMMSON-203ENST00000641005 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
SAMMSON-203ENST00000641005 CCDC146Q8IYE0 955 aa9.95□□□□□ -0.82
SAMMSON-203ENST00000641005 ZCRB1Q8TBF4 217 aaKnown RBP9.95□□□□□ -0.82
SAMMSON-203ENST00000641005 ADAMTS8Q9UP79 889 aa9.95□□□□□ -0.82
SAMMSON-203ENST00000641005 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
SAMMSON-203ENST00000641005 NUDCQ9Y266 331 aa9.94□□□□□ -0.82
SAMMSON-203ENST00000641005 MTHFSDQ2M296 383 aaKnown RBP9.94□□□□□ -0.82
SAMMSON-203ENST00000641005 CDCA7Q9BWT1 371 aaPredicted RBP9.94□□□□□ -0.82
SAMMSON-203ENST00000641005 PKD1L3Q7Z443 1732 aa9.94□□□□□ -0.82
SAMMSON-203ENST00000641005 KCNQ2O43526 872 aa9.93□□□□□ -0.82
SAMMSON-203ENST00000641005 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
SAMMSON-203ENST00000641005 ZNF530Q6P9A1 599 aaPredicted RBP9.92□□□□□ -0.82
SAMMSON-203ENST00000641005 PLEKHF1Q96S99 279 aa9.92□□□□□ -0.82
SAMMSON-203ENST00000641005 ADRA2BP18089 450 aa9.92□□□□□ -0.82
SAMMSON-203ENST00000641005 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
SAMMSON-203ENST00000641005 TRIM37O94972 964 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 PHKG2P15735 406 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 FCHSD2O94868 740 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 PLEKHO1Q53GL0 409 aaPredicted RBP9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 MPRIPQ6WCQ1 1025 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 SPG7Q9UQ90 795 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 PCDH11XQ9BZA7 1347 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 PCDH11YQ9BZA8 1340 aa9.91□□□□□ -0.82
SAMMSON-203ENST00000641005 TOGARAM1Q9Y4F4 1720 aa9.9□□□□□ -0.82
SAMMSON-203ENST00000641005 SBF2Q86WG5 1849 aa9.9□□□□□ -0.82
SAMMSON-203ENST00000641005 LGR6Q9HBX8 967 aa9.9□□□□□ -0.82
SAMMSON-203ENST00000641005 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.83
SAMMSON-203ENST00000641005 DCTN1Q14203 1278 aa9.9□□□□□ -0.83
SAMMSON-203ENST00000641005 SYTL4Q96C24 671 aaPredicted RBP9.9□□□□□ -0.83
SAMMSON-203ENST00000641005 DOT1LQ8TEK3 1739 aa9.89□□□□□ -0.83
SAMMSON-203ENST00000641005 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
SAMMSON-203ENST00000641005 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
SAMMSON-203ENST00000641005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.83
SAMMSON-203ENST00000641005 AMOTQ4VCS5 1084 aa9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 FAM196AQ6ZSG2 479 aa9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 IFNL2Q8IZJ0 200 aa9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 THUMPD2Q9BTF0 503 aaKnown RBP9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 MCM10Q7L590 875 aa9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 DEFB132Q7Z7B7 95 aa9.88□□□□□ -0.83
SAMMSON-203ENST00000641005 VIRMAQ69YN4 1812 aaKnown RBP9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 C1orf141Q5JVX7 400 aa9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 IL17REQ8NFR9 667 aa9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 APAF1O14727 1248 aa9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 ITGB4P16144 1822 aa9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 NKX1-1Q15270 411 aaPredicted RBP9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 AKAP4Q5JQC9 854 aa9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
SAMMSON-203ENST00000641005 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
SAMMSON-203ENST00000641005 CCER2I3L3R5 266 aa9.86□□□□□ -0.83
SAMMSON-203ENST00000641005 RUNDC1Q96C34 613 aa9.86□□□□□ -0.83
SAMMSON-203ENST00000641005 TNS1Q9HBL0 1735 aaKnown RBP9.86□□□□□ -0.83
SAMMSON-203ENST00000641005 MAP3K5Q99683 1374 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 TMPOP42166 694 aaKnown RBP9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 KCNQ4P56696 695 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 NFE2L2Q16236 605 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 GAS2L2Q8NHY3 880 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 PIGBQ92521 554 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 BTAF1O14981 1849 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 SCN11AQ9UI33 1791 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 GNAT3A8MTJ3 354 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 RNMTO43148 476 aaKnown RBP9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 RIPK4P57078 832 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
SAMMSON-203ENST00000641005 BCL9O00512 1426 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 NHSQ6T4R5 1651 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 APBA3O96018 575 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 DCAF5Q96JK2 942 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 BCL11BQ9C0K0 894 aaPredicted RBP9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 MIS18AQ9NYP9 233 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
SAMMSON-203ENST00000641005 GOLGB1Q14789 3259 aaKnown RBP9.83□□□□□ -0.84
SAMMSON-203ENST00000641005 PLEKHG2Q9H7P9 1386 aa9.83□□□□□ -0.84
SAMMSON-203ENST00000641005 SOCS7O14512 581 aa9.82□□□□□ -0.84
SAMMSON-203ENST00000641005 EZH2Q15910 746 aaKnown RBP9.82□□□□□ -0.84
SAMMSON-203ENST00000641005 PROM2Q8N271 834 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms