RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 KRT32Q14532 448 aa23.19■■□□□ 1.3
KCNMA1-293ENST00000640969 BMP2KQ9NSY1 1161 aaPredicted RBP23.19■■□□□ 1.3
KCNMA1-293ENST00000640969 SPG7Q9UQ90 795 aa23.18■■□□□ 1.3
KCNMA1-293ENST00000640969 ESPNB1AK53 854 aa23.18■■□□□ 1.3
KCNMA1-293ENST00000640969 EPB41L2O43491 1005 aaKnown RBP23.18■■□□□ 1.3
KCNMA1-293ENST00000640969 KIAA1328Q86T90 577 aa23.18■■□□□ 1.3
KCNMA1-293ENST00000640969 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
KCNMA1-293ENST00000640969 PKNOX2Q96KN3 472 aa23.18■■□□□ 1.3
KCNMA1-293ENST00000640969 CASTP20810 708 aaKnown RBP23.17■■□□□ 1.3
KCNMA1-293ENST00000640969 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
KCNMA1-293ENST00000640969 ZNF692Q9BU19 519 aaPredicted RBP23.17■■□□□ 1.3
KCNMA1-293ENST00000640969 MAP3K11Q16584 847 aa23.17■■□□□ 1.3
KCNMA1-293ENST00000640969 SYCE3A1L190 88 aa23.17■■□□□ 1.3
KCNMA1-293ENST00000640969 HFM1A2PYH4 1435 aa23.17■■□□□ 1.3
KCNMA1-293ENST00000640969 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
KCNMA1-293ENST00000640969 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
KCNMA1-293ENST00000640969 WASF1Q92558 559 aa23.16■■□□□ 1.3
KCNMA1-293ENST00000640969 CAMK4Q16566 473 aa23.16■■□□□ 1.3
KCNMA1-293ENST00000640969 PROSER2Q86WR7 435 aaPredicted RBP23.16■■□□□ 1.3
KCNMA1-293ENST00000640969 DDX11Q96FC9 970 aa23.16■■□□□ 1.3
KCNMA1-293ENST00000640969 NUTM1Q86Y26 1132 aa23.15■■□□□ 1.3
KCNMA1-293ENST00000640969 TAF4BQ92750 862 aa23.15■■□□□ 1.3
KCNMA1-293ENST00000640969 RBM5P52756 815 aaKnown RBP eCLIP23.15■■□□□ 1.3
KCNMA1-293ENST00000640969 TOM1L2Q6ZVM7 507 aa23.15■■□□□ 1.3
KCNMA1-293ENST00000640969 PIBF1Q8WXW3 757 aa23.15■■□□□ 1.3
KCNMA1-293ENST00000640969 BTBD11A6QL63 1104 aa23.14■■□□□ 1.3
KCNMA1-293ENST00000640969 RAI14Q9P0K7 980 aa23.14■■□□□ 1.3
KCNMA1-293ENST00000640969 ERICH4A6NGS2 130 aa23.14■■□□□ 1.3
KCNMA1-293ENST00000640969 ARHGAP29Q52LW3 1261 aa23.14■■□□□ 1.3
KCNMA1-293ENST00000640969 SPINK5Q9NQ38 1064 aaPredicted RBP23.14■■□□□ 1.3
KCNMA1-293ENST00000640969 CFAP100Q494V2 611 aa23.14■■□□□ 1.29
KCNMA1-293ENST00000640969 CEP126Q9P2H0 1117 aa23.14■■□□□ 1.29
KCNMA1-293ENST00000640969 RPAP2Q8IXW5 612 aaPredicted RBP23.13■■□□□ 1.29
KCNMA1-293ENST00000640969 CCDC148Q8NFR7 591 aa23.13■■□□□ 1.29
KCNMA1-293ENST00000640969 GBP2P32456 591 aaPredicted RBP23.13■■□□□ 1.29
KCNMA1-293ENST00000640969 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
KCNMA1-293ENST00000640969 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
KCNMA1-293ENST00000640969 EZRP15311 586 aaKnown RBP23.13■■□□□ 1.29
KCNMA1-293ENST00000640969 JAKMIP3Q5VZ66 844 aa23.12■■□□□ 1.29
KCNMA1-293ENST00000640969 IMMTQ16891 758 aaKnown RBP23.12■■□□□ 1.29
KCNMA1-293ENST00000640969 PDCL2Q8N4E4 241 aa23.12■■□□□ 1.29
KCNMA1-293ENST00000640969 CEP131Q9UPN4 1083 aa23.12■■□□□ 1.29
KCNMA1-293ENST00000640969 UBXN4Q92575 508 aa23.12■■□□□ 1.29
KCNMA1-293ENST00000640969 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
KCNMA1-293ENST00000640969 ZNF76P36508 570 aa23.11■■□□□ 1.29
KCNMA1-293ENST00000640969 ANKRD30BQ9BXX2 1392 aa23.11■■□□□ 1.29
KCNMA1-293ENST00000640969 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
KCNMA1-293ENST00000640969 RTEL1-TNFRSF6BF6WH68 1400 aa23.11■■□□□ 1.29
KCNMA1-293ENST00000640969 CFTRP13569 1480 aa23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 PDIA4P13667 645 aaKnown RBP23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 MATR3P43243 847 aaKnown RBP eCLIP23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 CCDC83Q8IWF9 413 aa23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 ZNF397Q8NF99 534 aaPredicted RBP23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 ZSCAN30Q86W11 494 aa23.1■■□□□ 1.29
KCNMA1-293ENST00000640969 LRP2BPQ9P2M1 347 aa23.09■■□□□ 1.29
KCNMA1-293ENST00000640969 IDH1O75874 414 aaKnown RBP23.09■■□□□ 1.29
KCNMA1-293ENST00000640969 USP8P40818 1118 aa23.09■■□□□ 1.29
KCNMA1-293ENST00000640969 AIDAQ96BJ3 306 aa23.09■■□□□ 1.29
KCNMA1-293ENST00000640969 TAF3Q5VWG9 929 aa23.08■■□□□ 1.29
KCNMA1-293ENST00000640969 FERMT3Q86UX7 667 aa23.08■■□□□ 1.29
KCNMA1-293ENST00000640969 ZSCAN29Q8IWY8 852 aaPredicted RBP23.08■■□□□ 1.28
KCNMA1-293ENST00000640969 SSR1P43307 286 aaKnown RBP23.08■■□□□ 1.28
KCNMA1-293ENST00000640969 EXOC6BQ9Y2D4 811 aa23.08■■□□□ 1.28
KCNMA1-293ENST00000640969 RRP9O43818 475 aaKnown RBP23.07■■□□□ 1.28
KCNMA1-293ENST00000640969 USP5P45974 858 aa23.07■■□□□ 1.28
KCNMA1-293ENST00000640969 TMCO3Q6UWJ1 677 aa23.07■■□□□ 1.28
KCNMA1-293ENST00000640969 FCHSD2O94868 740 aa23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 SLFN5Q08AF3 891 aa23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 PRPF40BQ6NWY9 871 aaKnown RBP23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 PPP1R1BQ9UD71 204 aaPredicted RBP23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 MPHOSPH10O00566 681 aaKnown RBP23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 DESP17661 470 aa23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 PTPN14Q15678 1187 aa23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 NFE2L2Q16236 605 aa23.06■■□□□ 1.28
KCNMA1-293ENST00000640969 SFPQP23246 707 aaKnown RBP eCLIP23.05■■□□□ 1.28
KCNMA1-293ENST00000640969 MX1P20591 662 aa23.05■■□□□ 1.28
KCNMA1-293ENST00000640969 CRACR2AQ9BSW2 395 aa23.05■■□□□ 1.28
KCNMA1-293ENST00000640969 GBP3Q9H0R5 595 aa23.05■■□□□ 1.28
KCNMA1-293ENST00000640969 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.28
KCNMA1-293ENST00000640969 KIF2AO00139 706 aaPredicted RBP23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 ZSCAN12O43309 604 aa23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 CCDC183Q5T5S1 534 aa23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 CASQ1P31415 396 aa23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 SPA17Q15506 151 aa23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 CCDC184Q52MB2 194 aa23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 IGHMBP2P38935 993 aaKnown RBP23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 INCENPQ9NQS7 918 aa23.04■■□□□ 1.28
KCNMA1-293ENST00000640969 NEBLO76041 1014 aa23.03■■□□□ 1.28
KCNMA1-293ENST00000640969 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
KCNMA1-293ENST00000640969 ANO10Q9NW15 660 aa23.03■■□□□ 1.28
KCNMA1-293ENST00000640969 TMPOP42166 694 aaKnown RBP23.03■■□□□ 1.28
KCNMA1-293ENST00000640969 KIF1BPQ96EK5 621 aa23.03■■□□□ 1.28
KCNMA1-293ENST00000640969 GNAT3A8MTJ3 354 aa23.02■■□□□ 1.28
KCNMA1-293ENST00000640969 U3KPZ7 1027 aaPredicted RBP23.02■■□□□ 1.28
KCNMA1-293ENST00000640969 RAB11FIP3O75154 756 aa23.01■■□□□ 1.27
KCNMA1-293ENST00000640969 KIF5CO60282 957 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms