RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 NEFHP12036 1026 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 MCM5P33992 734 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 PEX19P40855 299 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 PHLDB1Q86UU1 1377 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 FAM177BA6PVY3 158 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 USP5P45974 858 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 CCDC92Q53HC0 331 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-222ENST00000640072 DUSP27Q5VZP5 1158 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 FAM184AQ8NB25 1140 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 TAF4BQ92750 862 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 GBP4Q96PP9 640 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 PPP1R9BQ96SB3 815 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 MED4Q9NPJ6 270 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 CWC25Q9NXE8 425 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-222ENST00000640072 ZKSCAN5Q9Y2L8 839 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 SBNO2Q9Y2G9 1366 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 TCF3P15923 654 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 KCNA2P16389 499 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 RRP1P56182 461 aaKnown RBP7.32□□□□□ -1.24
NECAP1-222ENST00000640072 IGBP1P78318 339 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 IFT88Q13099 833 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 CDC37Q16543 378 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-222ENST00000640072 CCDC91Q7Z6B0 441 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 VPS37AQ8NEZ2 397 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 UHMK1Q8TAS1 419 aaKnown RBP7.32□□□□□ -1.24
NECAP1-222ENST00000640072 CCDC39Q9UFE4 941 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 ZNF232Q9UNY5 417 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 PPFIA3O75145 1194 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 C4orf46Q504U0 113 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 C10orf67Q8IYJ2 551 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 ARL10Q8N8L6 244 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 AGBL1Q96MI9 1066 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 RPS6KC1Q96S38 1066 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 SYNRGQ9UMZ2 1314 aa7.32□□□□□ -1.24
NECAP1-222ENST00000640072 SHTN1A0MZ66 631 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 TULP2O00295 520 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 SKILP12757 684 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 XBP1P17861 261 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 DPH6Q7L8W6 267 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 KIF2CQ99661 725 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 ARIH1Q9Y4X5 557 aaPredicted RBP7.31□□□□□ -1.24
NECAP1-222ENST00000640072 ATICP31939 592 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 NOM1Q5C9Z4 860 aaKnown RBP7.31□□□□□ -1.24
NECAP1-222ENST00000640072 UBXN4Q92575 508 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 INO80BQ9C086 356 aaPredicted RBP7.31□□□□□ -1.24
NECAP1-222ENST00000640072 JADE2Q9NQC1 790 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 PRR12Q9ULL5 1215 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 SMG6Q86US8 1419 aaKnown RBP7.31□□□□□ -1.24
NECAP1-222ENST00000640072 HOXA2O43364 376 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 OATP04181 439 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 RRM1P23921 792 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 CCDC15Q0P6D6 951 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 TRIML1Q8N9V2 468 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 CDC5LQ99459 802 aaKnown RBP7.31□□□□□ -1.24
NECAP1-222ENST00000640072 DIAPH3Q9NSV4 1193 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 SWAP70Q9UH65 585 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 PAXBP1Q9Y5B6 917 aa7.31□□□□□ -1.24
NECAP1-222ENST00000640072 MORC1Q86VD1 984 aa7.3□□□□□ -1.24
NECAP1-222ENST00000640072 DZIP3Q86Y13 1208 aaKnown RBP7.3□□□□□ -1.24
NECAP1-222ENST00000640072 RABL2AQ9UBK7 228 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-222ENST00000640072 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
NECAP1-222ENST00000640072 SNRNP27Q8WVK2 155 aaKnown RBP7.3□□□□□ -1.24
NECAP1-222ENST00000640072 TNPO1Q92973 898 aaKnown RBP7.3□□□□□ -1.24
NECAP1-222ENST00000640072 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
NECAP1-222ENST00000640072 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
NECAP1-222ENST00000640072 CDC37L1Q7L3B6 337 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 IQCF2Q8IXL9 164 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
NECAP1-222ENST00000640072 ZNF394Q53GI3 561 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 JARID2Q92833 1246 aaPredicted RBP7.29□□□□□ -1.24
NECAP1-222ENST00000640072 BCL2L12Q9HB09 334 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 RCAN3Q9UKA8 241 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 ITM2BQ9Y287 266 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 HMGXB3Q12766 1538 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 GTF2F1P35269 517 aaKnown RBP eCLIP7.29□□□□□ -1.24
NECAP1-222ENST00000640072 TERF2Q15554 542 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 GAS2L3Q86XJ1 694 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 SEZ6LQ9BYH1 1024 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 SUN2Q9UH99 717 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 SERPINA10Q9UK55 444 aa7.29□□□□□ -1.24
NECAP1-222ENST00000640072 SLFN14P0C7P3 912 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 ATP6V1AP38606 617 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 PPP4CP60510 307 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 FLIIQ13045 1269 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 HSP90B2PQ58FF3 399 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 CHCHD4Q8N4Q1 142 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 RWDD1Q9H446 243 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-222ENST00000640072 CPSF2Q9P2I0 782 aaKnown RBP7.28□□□□□ -1.24
NECAP1-222ENST00000640072 JRKLQ9Y4A0 524 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 EVA1CP58658 441 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 KRT222Q8N1A0 295 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 ZNF710Q8N1W2 664 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-222ENST00000640072 MPHOSPH6Q99547 160 aaKnown RBP7.28□□□□□ -1.24
NECAP1-222ENST00000640072 LARP6Q9BRS8 491 aaKnown RBP7.28□□□□□ -1.24
NECAP1-222ENST00000640072 CWC15Q9P013 229 aaKnown RBP7.28□□□□□ -1.24
NECAP1-222ENST00000640072 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
NECAP1-222ENST00000640072 KTN1Q86UP2 1357 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms