RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L12C9JPN9 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L21D6R901 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 PSME1Q06323 249 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
NECAP1-220ENST00000639841 ASB16Q96NS5 453 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L3A6NCW0 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L4A6NCW7 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L2Q6R6M4 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L1Q7RTZ2 530 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 PLEKHH2Q8IVE3 1493 aa10.11□□□□□ -0.79
NECAP1-220ENST00000639841 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
NECAP1-220ENST00000639841 MLECQ14165 292 aa10.11□□□□□ -0.79
NECAP1-220ENST00000639841 PTPROQ16827 1216 aa10.11□□□□□ -0.79
NECAP1-220ENST00000639841 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
NECAP1-220ENST00000639841 METTL14Q9HCE5 456 aaKnown RBP10.11□□□□□ -0.79
NECAP1-220ENST00000639841 DISP3Q9P2K9 1392 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
NECAP1-220ENST00000639841 KCNB2Q92953 911 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-220ENST00000639841 FAM135AQ9P2D6 1515 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 PHF14O94880 888 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 NCOA1Q15788 1441 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 TTC13Q8NBP0 860 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 EPAS1Q99814 870 aa10.1□□□□□ -0.79
NECAP1-220ENST00000639841 IQSEC3Q9UPP2 1182 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-220ENST00000639841 CDC42BPBQ9Y5S2 1711 aa10.09□□□□□ -0.79
NECAP1-220ENST00000639841 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
NECAP1-220ENST00000639841 PLA2R1Q13018 1463 aa10.09□□□□□ -0.79
NECAP1-220ENST00000639841 ZNF142P52746 1687 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-220ENST00000639841 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-220ENST00000639841 MAPK1P28482 360 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 PTK7Q13308 1070 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 TCEAL1Q15170 157 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 ECM1Q16610 540 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 GORABQ5T7V8 394 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 NT5DC4Q86YG4 428 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 ARHGAP35Q9NRY4 1499 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-220ENST00000639841 GTF2F1P35269 517 aaKnown RBP eCLIP10.08□□□□□ -0.8
NECAP1-220ENST00000639841 IGBP1P78318 339 aa10.08□□□□□ -0.8
NECAP1-220ENST00000639841 ZNF211Q13398 564 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-220ENST00000639841 LTBP4Q8N2S1 1624 aa10.07□□□□□ -0.8
NECAP1-220ENST00000639841 CASKIN1Q8WXD9 1431 aa10.07□□□□□ -0.8
NECAP1-220ENST00000639841 hCG_2014768A0A024R1R8 64 aa10.07□□□□□ -0.8
NECAP1-220ENST00000639841 H3BRB1 525 aa10.07□□□□□ -0.8
NECAP1-220ENST00000639841 PAK3O75914 559 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-220ENST00000639841 SLC43A3Q8NBI5 491 aa10.07□□□□□ -0.8
NECAP1-220ENST00000639841 TUT1Q9H6E5 874 aaKnown RBP10.07□□□□□ -0.8
NECAP1-220ENST00000639841 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
NECAP1-220ENST00000639841 CCDC181Q5TID7 509 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-220ENST00000639841 KIDINS220Q9ULH0 1771 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 COL19A1Q14993 1142 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 C1orf216Q8TAB5 229 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 EGFL7Q9UHF1 273 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
NECAP1-220ENST00000639841 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
NECAP1-220ENST00000639841 ATP2B1P20020 1258 aa10.05□□□□□ -0.8
NECAP1-220ENST00000639841 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-220ENST00000639841 DEPDC4Q8N2C3 294 aa10.05□□□□□ -0.8
NECAP1-220ENST00000639841 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
NECAP1-220ENST00000639841 KIAA1107Q9UPP5 1409 aa10.05□□□□□ -0.8
NECAP1-220ENST00000639841 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
NECAP1-220ENST00000639841 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
NECAP1-220ENST00000639841 ICMTO60725 284 aa10.04□□□□□ -0.8
NECAP1-220ENST00000639841 ABL1P00519 1130 aa10.04□□□□□ -0.8
NECAP1-220ENST00000639841 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
NECAP1-220ENST00000639841 SAMD9LQ8IVG5 1584 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
NECAP1-220ENST00000639841 ARMC5Q96C12 935 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 DCTN4Q9UJW0 460 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 CAMSAP1Q5T5Y3 1602 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 PEX14O75381 377 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 JAZF1Q86VZ6 243 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 AFAP1Q8N556 730 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 FAM174AQ8TBP5 190 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 MKRN1Q9UHC7 482 aaKnown RBP10.03□□□□□ -0.8
NECAP1-220ENST00000639841 PCDHGC3Q9UN70 934 aa10.03□□□□□ -0.8
NECAP1-220ENST00000639841 SUPT6HQ7KZ85 1726 aaKnown RBP10.03□□□□□ -0.8
NECAP1-220ENST00000639841 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.8
NECAP1-220ENST00000639841 PLXNC1O60486 1568 aa10.02□□□□□ -0.8
NECAP1-220ENST00000639841 TMEM92Q6UXU6 159 aa10.02□□□□□ -0.81
NECAP1-220ENST00000639841 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
NECAP1-220ENST00000639841 CAPN10Q9HC96 672 aa10.02□□□□□ -0.81
NECAP1-220ENST00000639841 INO80Q9ULG1 1556 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-220ENST00000639841 ATP7AQ04656 1500 aa10.02□□□□□ -0.81
NECAP1-220ENST00000639841 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.81
NECAP1-220ENST00000639841 SKIP12755 728 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms