RNA–Protein interactions for RNA: ENST00000639321.1

KCNMA1-256, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 5

Gene KCNMA1, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-256	ENST00000639321	RGPD2	P0DJD1	1756 aa		12.87	□□□□□ -0.35
KCNMA1-256	ENST00000639321	ARHGEF25	Q86VW2	580 aa		12.87	□□□□□ -0.35
KCNMA1-256	ENST00000639321	TCP11L2	Q8N4U5	519 aa		12.87	□□□□□ -0.35
KCNMA1-256	ENST00000639321	COL18A1	P39060	1754 aa		12.86	□□□□□ -0.35
KCNMA1-256	ENST00000639321	TOM1	O60784	492 aa		12.86	□□□□□ -0.35
KCNMA1-256	ENST00000639321	HMOX1	P09601	288 aa		12.86	□□□□□ -0.35
KCNMA1-256	ENST00000639321	ABCC6	O95255	1503 aa		12.86	□□□□□ -0.35
KCNMA1-256	ENST00000639321	DLG5	Q8TDM6	1919 aa		12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	WWC1	Q8IX03	1113 aa		12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	COG6	Q9Y2V7	657 aa		12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	RRP9	O43818	475 aa	Known RBP	12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	PRKAR2B	P31323	418 aa		12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	AAMP	Q13685	434 aa		12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	PANK1	Q8TE04	598 aa		12.85	□□□□□ -0.35
KCNMA1-256	ENST00000639321	NCBP3	Q53F19	620 aa	Known RBP	12.84	□□□□□ -0.35
KCNMA1-256	ENST00000639321	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.84	□□□□□ -0.35
KCNMA1-256	ENST00000639321	CANX	P27824	592 aa	Known RBP	12.84	□□□□□ -0.35
KCNMA1-256	ENST00000639321	SULT6B1	Q6IMI4	303 aa		12.84	□□□□□ -0.35
KCNMA1-256	ENST00000639321	CERK	Q8TCT0	537 aa		12.84	□□□□□ -0.35
KCNMA1-256	ENST00000639321	CABLES1	Q8TDN4	633 aa		12.84	□□□□□ -0.35
KCNMA1-256	ENST00000639321	IGSF1	Q8N6C5	1336 aa		12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	ZC3H6	P61129	1189 aa	Known RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	ANTXR1	Q9H6X2	564 aa		12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	RRP7A	Q9Y3A4	280 aa	Known RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	FAM208A	Q9UK61	1670 aa	Known RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	CAMTA1	Q9Y6Y1	1673 aa		12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	COL16A1	Q07092	1604 aa	Predicted RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	HSP90AA1	P07900	732 aa	Known RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	NEUROD2	Q15784	382 aa		12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	LTV1	Q96GA3	475 aa	Predicted RBP	12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	EYA1	Q99502	592 aa		12.83	□□□□□ -0.36
KCNMA1-256	ENST00000639321	TMPO	P42166	694 aa	Known RBP	12.82	□□□□□ -0.36
KCNMA1-256	ENST00000639321	CCDC27	Q2M243	656 aa		12.82	□□□□□ -0.36
KCNMA1-256	ENST00000639321	CPD	O75976	1380 aa		12.82	□□□□□ -0.36
KCNMA1-256	ENST00000639321	AEBP1	Q8IUX7	1158 aa		12.82	□□□□□ -0.36
KCNMA1-256	ENST00000639321	LRRC59	Q96AG4	307 aa	Known RBP	12.82	□□□□□ -0.36
KCNMA1-256	ENST00000639321	KDR	P35968	1356 aa		12.81	□□□□□ -0.36
KCNMA1-256	ENST00000639321	UBAP1L	F5GYI3	381 aa		12.81	□□□□□ -0.36
KCNMA1-256	ENST00000639321	RARS	P54136	660 aa	Known RBP	12.81	□□□□□ -0.36
KCNMA1-256	ENST00000639321	SLK	Q9H2G2	1235 aa	Predicted RBP	12.81	□□□□□ -0.36
KCNMA1-256	ENST00000639321	PIP4K2B	P78356	416 aa		12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	TBC1D32	Q96NH3	1257 aa		12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	UPF2	Q9HAU5	1272 aa	Known RBP	12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	KIAA0232	Q92628	1395 aa		12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	HAP1	P54257	671 aa	Predicted RBP	12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	PHACTR3	Q96KR7	559 aa		12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	PHF23	Q9BUL5	403 aa	Predicted RBP	12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	LMO7	Q8WWI1	1683 aa		12.8	□□□□□ -0.36
KCNMA1-256	ENST00000639321	NFE2L2	Q16236	605 aa		12.79	□□□□□ -0.36
KCNMA1-256	ENST00000639321	L1TD1	Q5T7N2	865 aa	Known RBP	12.79	□□□□□ -0.36
KCNMA1-256	ENST00000639321	ANKRD24	Q8TF21	1146 aa		12.79	□□□□□ -0.36
KCNMA1-256	ENST00000639321	AXIN2	Q9Y2T1	843 aa		12.79	□□□□□ -0.36
KCNMA1-256	ENST00000639321	PCDHB15	Q9Y5E8	787 aa		12.79	□□□□□ -0.36
KCNMA1-256	ENST00000639321	RIPK4	P57078	832 aa		12.79	□□□□□ -0.36
KCNMA1-256	ENST00000639321	WDR63	Q8IWG1	891 aa		12.78	□□□□□ -0.36
KCNMA1-256	ENST00000639321	TBC1D2	Q9BYX2	928 aa		12.78	□□□□□ -0.36
KCNMA1-256	ENST00000639321	PDZRN3	Q9UPQ7	1066 aa		12.78	□□□□□ -0.36
KCNMA1-256	ENST00000639321	NCAPD2	Q15021	1401 aa		12.78	□□□□□ -0.36
KCNMA1-256	ENST00000639321	RLBP1	P12271	317 aa		12.77	□□□□□ -0.36
KCNMA1-256	ENST00000639321	CHRNA2	Q15822	529 aa		12.77	□□□□□ -0.36
KCNMA1-256	ENST00000639321	TRIM35	Q9UPQ4	493 aa		12.77	□□□□□ -0.36
KCNMA1-256	ENST00000639321	ERBB3	P21860	1342 aa		12.77	□□□□□ -0.37
KCNMA1-256	ENST00000639321	NBPF6	Q5VWK0	638 aa		12.77	□□□□□ -0.37
KCNMA1-256	ENST00000639321	NBPF4	Q96M43	638 aa		12.77	□□□□□ -0.37
KCNMA1-256	ENST00000639321	RWDD1	Q9H446	243 aa	Predicted RBP	12.77	□□□□□ -0.37
KCNMA1-256	ENST00000639321	USHBP1	Q8N6Y0	703 aa		12.76	□□□□□ -0.37
KCNMA1-256	ENST00000639321	PRDM11	Q9NQV5	511 aa		12.76	□□□□□ -0.37
KCNMA1-256	ENST00000639321	COL14A1	Q05707	1796 aa	Known RBP	12.76	□□□□□ -0.37
KCNMA1-256	ENST00000639321	LMOD3	Q0VAK6	560 aa		12.75	□□□□□ -0.37
KCNMA1-256	ENST00000639321	TNN	Q9UQP3	1299 aa		12.75	□□□□□ -0.37
KCNMA1-256	ENST00000639321	CLCN1	P35523	988 aa		12.74	□□□□□ -0.37
KCNMA1-256	ENST00000639321	GAS2L2	Q8NHY3	880 aa		12.73	□□□□□ -0.37
KCNMA1-256	ENST00000639321	IL16	Q14005	1332 aa		12.73	□□□□□ -0.37
KCNMA1-256	ENST00000639321	CSB-PGBD3	P0DP91	1061 aa		12.73	□□□□□ -0.37
KCNMA1-256	ENST00000639321	MTHFSD	Q2M296	383 aa	Known RBP	12.73	□□□□□ -0.37
KCNMA1-256	ENST00000639321	COL5A2	P05997	1499 aa	Predicted RBP	12.73	□□□□□ -0.37
KCNMA1-256	ENST00000639321	PLCH1	Q4KWH8	1693 aa		12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	BCL2L13	Q9BXK5	485 aa		12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	FSD2	A1L4K1	749 aa		12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	MCM4	P33991	863 aa		12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	CALD1	Q05682	793 aa	Known RBP	12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	MVP	Q14764	893 aa	Known RBP	12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	MYH16	Q9H6N6	1097 aa		12.72	□□□□□ -0.37
KCNMA1-256	ENST00000639321	NLRP2	Q9NX02	1062 aa		12.71	□□□□□ -0.37
KCNMA1-256	ENST00000639321	PARP4	Q9UKK3	1724 aa	Known RBP	12.71	□□□□□ -0.37
KCNMA1-256	ENST00000639321	FAM83G	A6ND36	823 aa		12.71	□□□□□ -0.38
KCNMA1-256	ENST00000639321	LRRC37A3	O60309	1634 aa		12.71	□□□□□ -0.38
KCNMA1-256	ENST00000639321	WDR17	Q8IZU2	1322 aa		12.7	□□□□□ -0.38
KCNMA1-256	ENST00000639321	GOLGA6L3	A6NEY3	463 aa		12.7	□□□□□ -0.38
KCNMA1-256	ENST00000639321	XRCC6	P12956	609 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
KCNMA1-256	ENST00000639321	CHMP5	Q9NZZ3	219 aa		12.7	□□□□□ -0.38
KCNMA1-256	ENST00000639321	PKD1L3	Q7Z443	1732 aa		12.69	□□□□□ -0.38
KCNMA1-256	ENST00000639321	CT47B1	P0C2W7	299 aa	Predicted RBP	12.69	□□□□□ -0.38
KCNMA1-256	ENST00000639321	ZKSCAN2	Q63HK3	967 aa		12.69	□□□□□ -0.38
KCNMA1-256	ENST00000639321	THUMPD2	Q9BTF0	503 aa	Known RBP	12.69	□□□□□ -0.38
KCNMA1-256	ENST00000639321	C22orf23	Q9BZE7	217 aa		12.69	□□□□□ -0.38
KCNMA1-256	ENST00000639321	MAP3K5	Q99683	1374 aa		12.69	□□□□□ -0.38
KCNMA1-256	ENST00000639321	AMOT	Q4VCS5	1084 aa		12.68	□□□□□ -0.38
KCNMA1-256	ENST00000639321	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms