RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
LINC00598-216ENST00000638163 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
LINC00598-216ENST00000638163 CDCA7Q9BWT1 371 aaPredicted RBP13.4□□□□□ -0.26
LINC00598-216ENST00000638163 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
LINC00598-216ENST00000638163 EVA1CP58658 441 aa13.39□□□□□ -0.27
LINC00598-216ENST00000638163 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
LINC00598-216ENST00000638163 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
LINC00598-216ENST00000638163 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
LINC00598-216ENST00000638163 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
LINC00598-216ENST00000638163 NUTM2BA6NNL0 878 aaPredicted RBP13.38□□□□□ -0.27
LINC00598-216ENST00000638163 NUTM2EB1AL46 878 aaPredicted RBP13.38□□□□□ -0.27
LINC00598-216ENST00000638163 CHRNA2Q15822 529 aa13.38□□□□□ -0.27
LINC00598-216ENST00000638163 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
LINC00598-216ENST00000638163 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
LINC00598-216ENST00000638163 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
LINC00598-216ENST00000638163 THRAP3Q9Y2W1 955 aaKnown RBP13.38□□□□□ -0.27
LINC00598-216ENST00000638163 PARP4Q9UKK3 1724 aaKnown RBP13.38□□□□□ -0.27
LINC00598-216ENST00000638163 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
LINC00598-216ENST00000638163 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
LINC00598-216ENST00000638163 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
LINC00598-216ENST00000638163 ZNF853P0CG23 659 aa13.36□□□□□ -0.27
LINC00598-216ENST00000638163 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
LINC00598-216ENST00000638163 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
LINC00598-216ENST00000638163 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
LINC00598-216ENST00000638163 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 LRP6O75581 1613 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 IL2RBP14784 551 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 ZNF530Q6P9A1 599 aaPredicted RBP13.35□□□□□ -0.27
LINC00598-216ENST00000638163 BTG4Q9NY30 223 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
LINC00598-216ENST00000638163 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
LINC00598-216ENST00000638163 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
LINC00598-216ENST00000638163 PKD1L3Q7Z443 1732 aa13.34□□□□□ -0.27
LINC00598-216ENST00000638163 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
LINC00598-216ENST00000638163 SLIT2O94813 1529 aa13.34□□□□□ -0.27
LINC00598-216ENST00000638163 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
LINC00598-216ENST00000638163 MS4A1P11836 297 aa13.33□□□□□ -0.28
LINC00598-216ENST00000638163 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
LINC00598-216ENST00000638163 DLG5Q8TDM6 1919 aa13.33□□□□□ -0.28
LINC00598-216ENST00000638163 CHL1O00533 1208 aa13.32□□□□□ -0.28
LINC00598-216ENST00000638163 ADAMTS2O95450 1211 aa13.32□□□□□ -0.28
LINC00598-216ENST00000638163 ALDH1L2Q3SY69 923 aa13.32□□□□□ -0.28
LINC00598-216ENST00000638163 DCAF5Q96JK2 942 aa13.32□□□□□ -0.28
LINC00598-216ENST00000638163 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
LINC00598-216ENST00000638163 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
LINC00598-216ENST00000638163 MEGF6O75095 1541 aa13.31□□□□□ -0.28
LINC00598-216ENST00000638163 TEFQ10587 303 aa13.31□□□□□ -0.28
LINC00598-216ENST00000638163 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
LINC00598-216ENST00000638163 ILDR2Q71H61 639 aa13.31□□□□□ -0.28
LINC00598-216ENST00000638163 HOXB7P09629 217 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
LINC00598-216ENST00000638163 RRP1P56182 461 aaKnown RBP13.3□□□□□ -0.28
LINC00598-216ENST00000638163 ZNF772Q68DY9 489 aaPredicted RBP13.3□□□□□ -0.28
LINC00598-216ENST00000638163 LARP1Q6PKG0 1096 aaKnown RBP13.3□□□□□ -0.28
LINC00598-216ENST00000638163 ZCRB1Q8TBF4 217 aaKnown RBP13.3□□□□□ -0.28
LINC00598-216ENST00000638163 NGLY1Q96IV0 654 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
LINC00598-216ENST00000638163 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 KIF16BQ96L93 1317 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
LINC00598-216ENST00000638163 PHKG2P15735 406 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 AAMPQ13685 434 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 POTEAQ6S8J7 498 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 FNBP4Q8N3X1 1017 aaPredicted RBP13.29□□□□□ -0.28
LINC00598-216ENST00000638163 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
LINC00598-216ENST00000638163 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 MRC1P22897 1456 aa13.29□□□□□ -0.28
LINC00598-216ENST00000638163 RNMTO43148 476 aaKnown RBP13.28□□□□□ -0.28
LINC00598-216ENST00000638163 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
LINC00598-216ENST00000638163 MCM10Q7L590 875 aa13.28□□□□□ -0.28
LINC00598-216ENST00000638163 AFF2P51816 1311 aa13.28□□□□□ -0.28
LINC00598-216ENST00000638163 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.29
LINC00598-216ENST00000638163 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
LINC00598-216ENST00000638163 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
LINC00598-216ENST00000638163 EXOSC9Q06265 439 aaKnown RBP13.27□□□□□ -0.29
LINC00598-216ENST00000638163 VPS72Q15906 364 aa13.27□□□□□ -0.29
LINC00598-216ENST00000638163 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.29
LINC00598-216ENST00000638163 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
LINC00598-216ENST00000638163 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
LINC00598-216ENST00000638163 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
LINC00598-216ENST00000638163 PDE3AQ14432 1141 aa13.26□□□□□ -0.29
LINC00598-216ENST00000638163 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
LINC00598-216ENST00000638163 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
LINC00598-216ENST00000638163 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
LINC00598-216ENST00000638163 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
LINC00598-216ENST00000638163 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
LINC00598-216ENST00000638163 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
LINC00598-216ENST00000638163 THUMPD2Q9BTF0 503 aaKnown RBP13.25□□□□□ -0.29
LINC00598-216ENST00000638163 CHMP4BQ9H444 224 aaKnown RBP13.25□□□□□ -0.29
LINC00598-216ENST00000638163 EXOC5O00471 708 aa13.24□□□□□ -0.29
LINC00598-216ENST00000638163 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms