RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 TSG101Q99816 390 aa21.05■□□□□ 0.96
CACNA1A-247ENST00000637769 GSTTP1A0A1W2PQM5 241 aa21.05■□□□□ 0.96
CACNA1A-247ENST00000637769 FERP16591 822 aa21.05■□□□□ 0.96
CACNA1A-247ENST00000637769 AIMP1Q12904 312 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-247ENST00000637769 DNAJC2Q99543 621 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-247ENST00000637769 GOLGA6L9A6NEM1 432 aa21.05■□□□□ 0.96
CACNA1A-247ENST00000637769 PLEKHO1Q53GL0 409 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 CETN1Q12798 172 aa21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 CCDC196A0A1B0GTZ2 297 aa21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 GRPEL1Q9HAV7 217 aa21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 IL27Q8NEV9 243 aa21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 MAP3K11Q16584 847 aa21.04■□□□□ 0.96
CACNA1A-247ENST00000637769 ATP2B2Q01814 1243 aa21.03■□□□□ 0.96
CACNA1A-247ENST00000637769 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
CACNA1A-247ENST00000637769 SSR1P43307 286 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-247ENST00000637769 NEMFO60524 1076 aa21.03■□□□□ 0.96
CACNA1A-247ENST00000637769 CASQ1P31415 396 aa21.03■□□□□ 0.96
CACNA1A-247ENST00000637769 FILIP1Q7Z7B0 1213 aa21.03■□□□□ 0.96
CACNA1A-247ENST00000637769 ZNF76P36508 570 aa21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 MTMR7Q9Y216 660 aa21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 USO1O60763 962 aaKnown RBP21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 CEBPZQ03701 1054 aaKnown RBP21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 BLOC1S2Q6QNY1 142 aa21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 HMGB1P1B2RPK0 211 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 CTAGE5O15320 804 aa21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
CACNA1A-247ENST00000637769 FAM177A1Q8N128 213 aaPredicted RBP21.02■□□□□ 0.95
CACNA1A-247ENST00000637769 PTPN14Q15678 1187 aa21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 MPHOSPH8Q99549 860 aa21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 CGNQ9P2M7 1197 aaKnown RBP21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 PYM1Q9BRP8 204 aaKnown RBP21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 CAVIN2O95810 425 aa21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 PAFAH1B1P43034 410 aa21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 CFAP100Q494V2 611 aa21.01■□□□□ 0.95
CACNA1A-247ENST00000637769 LRRC45Q96CN5 670 aa21■□□□□ 0.95
CACNA1A-247ENST00000637769 BCL11BQ9C0K0 894 aaPredicted RBP21■□□□□ 0.95
CACNA1A-247ENST00000637769 ALS2CR12Q96Q35 445 aa21■□□□□ 0.95
CACNA1A-247ENST00000637769 PLVAPQ9BX97 442 aa20.99■□□□□ 0.95
CACNA1A-247ENST00000637769 EHBP1Q8NDI1 1231 aa20.99■□□□□ 0.95
CACNA1A-247ENST00000637769 PABPN1LA6NDY0 278 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-247ENST00000637769 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-247ENST00000637769 FSD2A1L4K1 749 aa20.99■□□□□ 0.95
CACNA1A-247ENST00000637769 TSNARE1Q96NA8 513 aa20.98■□□□□ 0.95
CACNA1A-247ENST00000637769 CACNA2D4Q7Z3S7 1137 aa20.97■□□□□ 0.95
CACNA1A-247ENST00000637769 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
CACNA1A-247ENST00000637769 NLRP2Q9NX02 1062 aa20.97■□□□□ 0.95
CACNA1A-247ENST00000637769 HOMER2Q9NSB8 354 aa20.97■□□□□ 0.95
CACNA1A-247ENST00000637769 GSDMDP57764 484 aa20.97■□□□□ 0.95
CACNA1A-247ENST00000637769 PLEKHH2Q8IVE3 1493 aa20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 CCDC113Q9H0I3 377 aa20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 TDO2P48775 406 aa20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 EHMT1Q9H9B1 1298 aa20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 TTC21AQ8NDW8 1320 aa20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 LARP1Q6PKG0 1096 aaKnown RBP20.96■□□□□ 0.95
CACNA1A-247ENST00000637769 ESPNB1AK53 854 aa20.95■□□□□ 0.94
CACNA1A-247ENST00000637769 ANO10Q9NW15 660 aa20.95■□□□□ 0.94
CACNA1A-247ENST00000637769 IFI16Q16666 785 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-247ENST00000637769 ZSCAN30Q86W11 494 aa20.95■□□□□ 0.94
CACNA1A-247ENST00000637769 IKBKGQ9Y6K9 419 aa20.95■□□□□ 0.94
CACNA1A-247ENST00000637769 HMGB1P09429 215 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-247ENST00000637769 HMOX1P09601 288 aa20.94■□□□□ 0.94
CACNA1A-247ENST00000637769 KLHL34Q8N239 644 aa20.94■□□□□ 0.94
CACNA1A-247ENST00000637769 TUBB4BP68371 445 aa20.94■□□□□ 0.94
CACNA1A-247ENST00000637769 CCDC172P0C7W6 258 aa20.94■□□□□ 0.94
CACNA1A-247ENST00000637769 CTNNA2P26232 953 aa20.94■□□□□ 0.94
CACNA1A-247ENST00000637769 SSX2IPQ9Y2D8 614 aa20.94■□□□□ 0.94
CACNA1A-247ENST00000637769 TMEM266Q2M3C6 531 aa20.93■□□□□ 0.94
CACNA1A-247ENST00000637769 SSBP05455 408 aaKnown RBP eCLIP20.93■□□□□ 0.94
CACNA1A-247ENST00000637769 ERICH4A6NGS2 130 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 ZWINTO95229 277 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 DAAM2Q86T65 1068 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 NUP133Q8WUM0 1156 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 SPECC1Q5M775 1068 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 FAM114A1Q8IWE2 563 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 ANKS4BQ8N8V4 417 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 GOPCQ9HD26 462 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 STXBP4Q6ZWJ1 553 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
CACNA1A-247ENST00000637769 TMOD2Q9NZR1 351 aa20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 RBM10P98175 930 aaKnown RBP20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 CCDC183Q5T5S1 534 aa20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 PIBF1Q8WXW3 757 aa20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 DDX46Q7L014 1031 aaKnown RBP20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 CCDC178Q5BJE1 867 aa20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 PDRG1Q9NUG6 133 aa20.91■□□□□ 0.94
CACNA1A-247ENST00000637769 COMMD10Q9Y6G5 202 aa20.9■□□□□ 0.94
CACNA1A-247ENST00000637769 STMN4Q9H169 189 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-247ENST00000637769 MCM5P33992 734 aa20.9■□□□□ 0.94
CACNA1A-247ENST00000637769 SF3B2Q13435 895 aaKnown RBP20.9■□□□□ 0.94
CACNA1A-247ENST00000637769 TTC12Q9H892 705 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-247ENST00000637769 SH2B1Q9NRF2 756 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-247ENST00000637769 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.94
CACNA1A-247ENST00000637769 CEP112Q8N8E3 955 aa20.89■□□□□ 0.94
CACNA1A-247ENST00000637769 YEATS4O95619 227 aa20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 BMS1Q14692 1282 aaKnown RBP20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 NSRP1Q9H0G5 558 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms