RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
CACNA1A-244ENST00000637625 ABCC3O15438 1527 aa17.69■□□□□ 0.42
CACNA1A-244ENST00000637625 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
CACNA1A-244ENST00000637625 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-244ENST00000637625 PTPRTO14522 1441 aa17.68■□□□□ 0.42
CACNA1A-244ENST00000637625 UHRF1BP1Q6BDS2 1440 aa17.68■□□□□ 0.42
CACNA1A-244ENST00000637625 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
CACNA1A-244ENST00000637625 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-244ENST00000637625 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
CACNA1A-244ENST00000637625 PACS2Q86VP3 889 aa17.67■□□□□ 0.42
CACNA1A-244ENST00000637625 PPP1R12CQ9BZL4 782 aa17.67■□□□□ 0.42
CACNA1A-244ENST00000637625 SIGLEC1Q9BZZ2 1709 aa17.66■□□□□ 0.42
CACNA1A-244ENST00000637625 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
CACNA1A-244ENST00000637625 UCN2Q96RP3 112 aa17.66■□□□□ 0.42
CACNA1A-244ENST00000637625 CFAP99D6REC4 459 aa17.65■□□□□ 0.42
CACNA1A-244ENST00000637625 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
CACNA1A-244ENST00000637625 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
CACNA1A-244ENST00000637625 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-244ENST00000637625 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-244ENST00000637625 ALG2Q9H553 416 aa17.65■□□□□ 0.42
CACNA1A-244ENST00000637625 NPATQ14207 1427 aa17.64■□□□□ 0.42
CACNA1A-244ENST00000637625 MROH2AA6NES4 1674 aa17.64■□□□□ 0.41
CACNA1A-244ENST00000637625 USP46P62068 366 aa17.64■□□□□ 0.41
CACNA1A-244ENST00000637625 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.41
CACNA1A-244ENST00000637625 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
CACNA1A-244ENST00000637625 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
CACNA1A-244ENST00000637625 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
CACNA1A-244ENST00000637625 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-244ENST00000637625 WASHC4Q2M389 1173 aa17.63■□□□□ 0.41
CACNA1A-244ENST00000637625 KIF1BO60333 1816 aa17.63■□□□□ 0.41
CACNA1A-244ENST00000637625 PALM3A6NDB9 673 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-244ENST00000637625 USP47Q96K76 1375 aa17.61■□□□□ 0.41
CACNA1A-244ENST00000637625 MTMR2Q13614 643 aa17.6■□□□□ 0.41
CACNA1A-244ENST00000637625 ROCK2O75116 1388 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-244ENST00000637625 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
CACNA1A-244ENST00000637625 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
CACNA1A-244ENST00000637625 REREQ9P2R6 1566 aa17.59■□□□□ 0.41
CACNA1A-244ENST00000637625 MADDQ8WXG6 1647 aa17.59■□□□□ 0.41
CACNA1A-244ENST00000637625 TSC1Q92574 1164 aa17.58■□□□□ 0.41
CACNA1A-244ENST00000637625 WASHC2AQ641Q2 1341 aa17.58■□□□□ 0.41
CACNA1A-244ENST00000637625 SWT1Q5T5J6 900 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-244ENST00000637625 PRR7Q8TB68 274 aa17.58■□□□□ 0.4
CACNA1A-244ENST00000637625 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-244ENST00000637625 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
CACNA1A-244ENST00000637625 USTQ9Y2C2 406 aa17.57■□□□□ 0.4
CACNA1A-244ENST00000637625 PSDA5PKW4 1024 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 BRD1O95696 1058 aa17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 SYNMO15061 1565 aa17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 MLECQ14165 292 aa17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 KCNK17Q96T54 332 aa17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 CLTCQ00610 1675 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-244ENST00000637625 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 SYMPKQ92797 1274 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 ADGRB3O60242 1522 aa17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 AGLP35573 1532 aa17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 TFIP11Q9UBB9 837 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 PREX1Q8TCU6 1659 aa17.54■□□□□ 0.4
CACNA1A-244ENST00000637625 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
CACNA1A-244ENST00000637625 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-244ENST00000637625 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-244ENST00000637625 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-244ENST00000637625 FUT2Q10981 343 aa17.52■□□□□ 0.4
CACNA1A-244ENST00000637625 CCDC7Q96M83 1385 aa17.52■□□□□ 0.4
CACNA1A-244ENST00000637625 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.39
CACNA1A-244ENST00000637625 NOS1P29475 1434 aa17.51■□□□□ 0.39
CACNA1A-244ENST00000637625 PDE4CQ08493 712 aa17.51■□□□□ 0.39
CACNA1A-244ENST00000637625 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
CACNA1A-244ENST00000637625 NEURL4Q96JN8 1562 aa17.51■□□□□ 0.39
CACNA1A-244ENST00000637625 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 CSB-PGBD3P0DP91 1061 aa17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 KCNA1Q09470 495 aa17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 TMEM88BA6NKF7 163 aa17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
CACNA1A-244ENST00000637625 LAMC1P11047 1609 aa17.49■□□□□ 0.39
CACNA1A-244ENST00000637625 ARHGAP31Q2M1Z3 1444 aa17.49■□□□□ 0.39
CACNA1A-244ENST00000637625 NR6A1Q15406 480 aa17.49■□□□□ 0.39
CACNA1A-244ENST00000637625 SEPT9Q9UHD8 586 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-244ENST00000637625 PPLO60437 1756 aa17.48■□□□□ 0.39
CACNA1A-244ENST00000637625 C6orf229H3BNL8 230 aa17.48■□□□□ 0.39
CACNA1A-244ENST00000637625 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
CACNA1A-244ENST00000637625 ST20-MTHFSA0A0A6YYL1 179 aa17.47■□□□□ 0.39
CACNA1A-244ENST00000637625 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
CACNA1A-244ENST00000637625 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-244ENST00000637625 MYOM2P54296 1465 aa17.46■□□□□ 0.39
CACNA1A-244ENST00000637625 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.38
CACNA1A-244ENST00000637625 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
CACNA1A-244ENST00000637625 IQGAP1P46940 1657 aa17.44■□□□□ 0.38
CACNA1A-244ENST00000637625 PSEN2P49810 448 aa17.44■□□□□ 0.38
CACNA1A-244ENST00000637625 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
CACNA1A-244ENST00000637625 TBC1D9Q6ZT07 1266 aa17.44■□□□□ 0.38
CACNA1A-244ENST00000637625 ANP32CO43423 234 aa17.42■□□□□ 0.38
CACNA1A-244ENST00000637625 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-244ENST00000637625 IVNS1ABPQ9Y6Y0 642 aa17.42■□□□□ 0.38
CACNA1A-244ENST00000637625 KIAA1210Q9ULL0 1709 aa17.42■□□□□ 0.38
CACNA1A-244ENST00000637625 HOXB1P14653 301 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-244ENST00000637625 ATG7O95352 703 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms