RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 NSD2O96028 1365 aa12.35□□□□□ -0.43
CLN8-214ENST00000637594 TMF1P82094 1093 aa12.35□□□□□ -0.43
CLN8-214ENST00000637594 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
CLN8-214ENST00000637594 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
CLN8-214ENST00000637594 UTRNP46939 3433 aa12.34□□□□□ -0.43
CLN8-214ENST00000637594 KIF24Q5T7B8 1368 aa12.34□□□□□ -0.43
CLN8-214ENST00000637594 POLD1P28340 1107 aa12.34□□□□□ -0.43
CLN8-214ENST00000637594 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
CLN8-214ENST00000637594 RRS1Q15050 365 aaKnown RBP12.33□□□□□ -0.44
CLN8-214ENST00000637594 SYTL4Q96C24 671 aaPredicted RBP12.33□□□□□ -0.44
CLN8-214ENST00000637594 INSRP06213 1382 aa12.32□□□□□ -0.44
CLN8-214ENST00000637594 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
CLN8-214ENST00000637594 KCNQ4P56696 695 aa12.32□□□□□ -0.44
CLN8-214ENST00000637594 RAPGEF4Q8WZA2 1011 aa12.32□□□□□ -0.44
CLN8-214ENST00000637594 GGNBP2Q9H3C7 697 aa12.32□□□□□ -0.44
CLN8-214ENST00000637594 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
CLN8-214ENST00000637594 MEGF6O75095 1541 aa12.32□□□□□ -0.44
CLN8-214ENST00000637594 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
CLN8-214ENST00000637594 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
CLN8-214ENST00000637594 GPR162Q16538 588 aa12.31□□□□□ -0.44
CLN8-214ENST00000637594 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
CLN8-214ENST00000637594 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
CLN8-214ENST00000637594 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
CLN8-214ENST00000637594 TIMELESSQ9UNS1 1208 aa12.3□□□□□ -0.44
CLN8-214ENST00000637594 USP47Q96K76 1375 aa12.3□□□□□ -0.44
CLN8-214ENST00000637594 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
CLN8-214ENST00000637594 FLAD1Q8NFF5 587 aa12.29□□□□□ -0.44
CLN8-214ENST00000637594 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
CLN8-214ENST00000637594 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
CLN8-214ENST00000637594 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
CLN8-214ENST00000637594 FLT4P35916 1363 aa12.29□□□□□ -0.44
CLN8-214ENST00000637594 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
CLN8-214ENST00000637594 LY75O60449 1722 aa12.28□□□□□ -0.44
CLN8-214ENST00000637594 CYP27B1O15528 508 aa12.28□□□□□ -0.44
CLN8-214ENST00000637594 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
CLN8-214ENST00000637594 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
CLN8-214ENST00000637594 C1QTNF8P60827 252 aa12.27□□□□□ -0.45
CLN8-214ENST00000637594 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
CLN8-214ENST00000637594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLN8-214ENST00000637594 SHANK3Q9BYB0 1731 aa12.27□□□□□ -0.45
CLN8-214ENST00000637594 TRIM26Q12899 539 aaPredicted RBP12.26□□□□□ -0.45
CLN8-214ENST00000637594 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
CLN8-214ENST00000637594 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
CLN8-214ENST00000637594 CHD4Q14839 1912 aa12.26□□□□□ -0.45
CLN8-214ENST00000637594 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
CLN8-214ENST00000637594 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
CLN8-214ENST00000637594 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
CLN8-214ENST00000637594 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
CLN8-214ENST00000637594 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
CLN8-214ENST00000637594 PALLDQ8WX93 1383 aa12.24□□□□□ -0.45
CLN8-214ENST00000637594 PIGBQ92521 554 aa12.24□□□□□ -0.45
CLN8-214ENST00000637594 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
CLN8-214ENST00000637594 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
CLN8-214ENST00000637594 MSH5O43196 834 aa12.23□□□□□ -0.45
CLN8-214ENST00000637594 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLN8-214ENST00000637594 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
CLN8-214ENST00000637594 EYA1Q99502 592 aa12.22□□□□□ -0.45
CLN8-214ENST00000637594 POLKQ9UBT6 870 aa12.22□□□□□ -0.45
CLN8-214ENST00000637594 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
CLN8-214ENST00000637594 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
CLN8-214ENST00000637594 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
CLN8-214ENST00000637594 CLSPNQ9HAW4 1339 aa12.2□□□□□ -0.46
CLN8-214ENST00000637594 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
CLN8-214ENST00000637594 SSFA2P28290 1259 aa12.2□□□□□ -0.46
CLN8-214ENST00000637594 SIK1P57059 783 aa12.2□□□□□ -0.46
CLN8-214ENST00000637594 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
CLN8-214ENST00000637594 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
CLN8-214ENST00000637594 MSL1Q68DK7 614 aa12.19□□□□□ -0.46
CLN8-214ENST00000637594 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
CLN8-214ENST00000637594 IFNL2Q8IZJ0 200 aa12.19□□□□□ -0.46
CLN8-214ENST00000637594 AK7Q96M32 723 aa12.19□□□□□ -0.46
CLN8-214ENST00000637594 GOLGB1Q14789 3259 aaKnown RBP12.18□□□□□ -0.46
CLN8-214ENST00000637594 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
CLN8-214ENST00000637594 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
CLN8-214ENST00000637594 PHKG2P15735 406 aa12.18□□□□□ -0.46
CLN8-214ENST00000637594 ASAP1Q9ULH1 1129 aa12.18□□□□□ -0.46
CLN8-214ENST00000637594 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 C5P01031 1676 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 KIF20BQ96Q89 1820 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 ATG3Q9NT62 314 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
CLN8-214ENST00000637594 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
CLN8-214ENST00000637594 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
CLN8-214ENST00000637594 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
CLN8-214ENST00000637594 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
CLN8-214ENST00000637594 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
CLN8-214ENST00000637594 ITPK1Q13572 414 aa12.15□□□□□ -0.46
CLN8-214ENST00000637594 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
CLN8-214ENST00000637594 ITGB4P16144 1822 aa12.15□□□□□ -0.46
CLN8-214ENST00000637594 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
CLN8-214ENST00000637594 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
CLN8-214ENST00000637594 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
CLN8-214ENST00000637594 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
CLN8-214ENST00000637594 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
CLN8-214ENST00000637594 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
CLN8-214ENST00000637594 PHF14O94880 888 aa12.13□□□□□ -0.47
CLN8-214ENST00000637594 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
CLN8-214ENST00000637594 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms