RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	NDUFB5	O43674	189 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	PPFIA4	O75335	1185 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	LDHB	P07195	334 aa	Known RBP	3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	LIG1	P18858	919 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	APLP1	P51693	650 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	ARHGAP4	P98171	946 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	EML3	Q32P44	896 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	C4orf46	Q504U0	113 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	CHADL	Q6NUI6	762 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	OGFOD1	Q8N543	542 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	TTC13	Q8NBP0	860 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	GTF3C2	Q8WUA4	911 aa	Predicted RBP	3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	MKL1	Q969V6	931 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	SGSM3	Q96HU1	749 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	RPS6KC1	Q96S38	1066 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	PRKD2	Q9BZL6	878 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	ANO2	Q9NQ90	1003 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	CYLD	Q9NQC7	956 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	GABBR1	Q9UBS5	961 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	PARP2	Q9UGN5	583 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	TCEAL9	Q9UHQ7	104 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	DMGDH	Q9UI17	866 aa	Known RBP	3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	G3BP2	Q9UN86	482 aa	Known RBP	3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	COMMD10	Q9Y6G5	202 aa		3.43	□□□□□ -1.86
GABRB3-223	ENST00000637293	RCCD1	A6NED2	376 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	PLIN1	O60240	522 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	PRMT3	O60678	531 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	PTCD1	O75127	700 aa	Known RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	FAM13A	O94988	1023 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	MCC	P23508	829 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	SEC13	P55735	322 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	RHBDL3	P58872	404 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	DAB2	P98082	770 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	PLCB3	Q01970	1234 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	FMR1	Q06787	632 aa	Known RBP eCLIP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	HDAC1	Q13547	482 aa	Predicted RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	NCOA4	Q13772	614 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	MAP7D1	Q3KQU3	841 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	FOXD4L3	Q6VB84	417 aa	Predicted RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	FMNL3	Q8IVF7	1028 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	DEPDC4	Q8N2C3	294 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	RDH13	Q8NBN7	331 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	TMC1	Q8TDI8	760 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	PTCD2	Q8WV60	388 aa	Known RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	JDP2	Q8WYK2	163 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	SCYL1	Q96KG9	808 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	NAP1L4	Q99733	375 aa	Known RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	JADE2	Q9NQC1	790 aa		3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	DNAAF2	Q9NVR5	837 aa	Known RBP	3.42	□□□□□ -1.86
GABRB3-223	ENST00000637293	PITPNM1	O00562	1244 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	KIF3B	O15066	747 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	TREH	O43280	583 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	WDHD1	O75717	1129 aa	Predicted RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	PDGFRB	P09619	1106 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	PAX3	P23760	479 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	DNAJB2	P25686	324 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	ZEB1	P37275	1124 aa	Predicted RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	MAPK8	P45983	427 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	TNNI2	P48788	182 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	CNGB1	Q14028	1251 aa	Predicted RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	SAFB2	Q14151	953 aa	Known RBP eCLIP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	NR6A1	Q15406	480 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	PLEKHG4	Q58EX7	1191 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	KRBA2	Q6ZNG9	492 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	TMC7	Q7Z402	723 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	RPUSD2	Q8IZ73	545 aa	Known RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	EPS8L1	Q8TE68	723 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	ZNF594	Q96JF6	807 aa	Predicted RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	C8orf48	Q96LL4	319 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	DMRTB1	Q96MA1	342 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	DUSP9	Q99956	384 aa	Known RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	PRDM10	Q9NQV6	1147 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	NOD1	Q9Y239	953 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	PCDHGA10	Q9Y5H3	936 aa		3.41	□□□□□ -1.86
GABRB3-223	ENST00000637293	C6orf229	H3BNL8	230 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	FBXO45	P0C2W1	286 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	SCNN1A	P37088	669 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	PRSS12	P56730	875 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZRSR2	Q15696	482 aa	Known RBP	3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	ECM1	Q16610	540 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	OCLN	Q16625	522 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	GRIPAP1	Q4V328	841 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	ARSH	Q5FYA8	562 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	ODR4	Q5SWX8	454 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	ALG1L	Q6GMV1	187 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	CLEC4G	Q6UXB4	293 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	MCF2L2	Q86YR7	1114 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	SIX5	Q8N196	739 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	PLPP7	Q8NBV4	271 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	JPH4	Q96JJ6	628 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	SENP7	Q9BQF6	1050 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	GNL3L	Q9NVN8	582 aa	Known RBP	3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	SIRPG	Q9P1W8	387 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	SWAP70	Q9UH65	585 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	DDX41	Q9UJV9	622 aa	Known RBP	3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	PNMA2	Q9UL42	364 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	WWC3	Q9ULE0	1092 aa		3.4	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms