RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
CHRNA4-216ENST00000636652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHRNA4-216ENST00000636652 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
CHRNA4-216ENST00000636652 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
CHRNA4-216ENST00000636652 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
CHRNA4-216ENST00000636652 APAF1O14727 1248 aa17.65■□□□□ 0.42
CHRNA4-216ENST00000636652 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
CHRNA4-216ENST00000636652 GLI3P10071 1580 aa17.65■□□□□ 0.42
CHRNA4-216ENST00000636652 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
CHRNA4-216ENST00000636652 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
CHRNA4-216ENST00000636652 NGEFQ8N5V2 710 aa17.64■□□□□ 0.41
CHRNA4-216ENST00000636652 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
CHRNA4-216ENST00000636652 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
CHRNA4-216ENST00000636652 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
CHRNA4-216ENST00000636652 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
CHRNA4-216ENST00000636652 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
CHRNA4-216ENST00000636652 PKD1L3Q7Z443 1732 aa17.62■□□□□ 0.41
CHRNA4-216ENST00000636652 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
CHRNA4-216ENST00000636652 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
CHRNA4-216ENST00000636652 ONECUT3O60422 494 aaPredicted RBP17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
CHRNA4-216ENST00000636652 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
CHRNA4-216ENST00000636652 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
CHRNA4-216ENST00000636652 THSD7AQ9UPZ6 1657 aa17.6■□□□□ 0.41
CHRNA4-216ENST00000636652 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 EXOC5O00471 708 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 RIPK4P57078 832 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 DDB1Q16531 1140 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 AKAP4Q5JQC9 854 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
CHRNA4-216ENST00000636652 LRRC37A3O60309 1634 aa17.58■□□□□ 0.41
CHRNA4-216ENST00000636652 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
CHRNA4-216ENST00000636652 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
CHRNA4-216ENST00000636652 GNAT3A8MTJ3 354 aa17.57■□□□□ 0.4
CHRNA4-216ENST00000636652 CYP27B1O15528 508 aa17.57■□□□□ 0.4
CHRNA4-216ENST00000636652 PHKG2P15735 406 aa17.57■□□□□ 0.4
CHRNA4-216ENST00000636652 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
CHRNA4-216ENST00000636652 A0A0G2JS52 829 aa17.56■□□□□ 0.4
CHRNA4-216ENST00000636652 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
CHRNA4-216ENST00000636652 RXRBP28702 533 aa17.56■□□□□ 0.4
CHRNA4-216ENST00000636652 MYT1Q01538 1121 aa17.56■□□□□ 0.4
CHRNA4-216ENST00000636652 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
CHRNA4-216ENST00000636652 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
CHRNA4-216ENST00000636652 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
CHRNA4-216ENST00000636652 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
CHRNA4-216ENST00000636652 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
CHRNA4-216ENST00000636652 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
CHRNA4-216ENST00000636652 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
CHRNA4-216ENST00000636652 SEPT12Q8IYM1 358 aa17.54■□□□□ 0.4
CHRNA4-216ENST00000636652 DDX54Q8TDD1 881 aaKnown RBP17.54■□□□□ 0.4
CHRNA4-216ENST00000636652 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
CHRNA4-216ENST00000636652 SHANK3Q9BYB0 1731 aa17.54■□□□□ 0.4
CHRNA4-216ENST00000636652 ZNF521Q96K83 1311 aa17.53■□□□□ 0.4
CHRNA4-216ENST00000636652 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
CHRNA4-216ENST00000636652 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
CHRNA4-216ENST00000636652 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
CHRNA4-216ENST00000636652 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
CHRNA4-216ENST00000636652 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
CHRNA4-216ENST00000636652 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.39
CHRNA4-216ENST00000636652 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
CHRNA4-216ENST00000636652 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
CHRNA4-216ENST00000636652 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
CHRNA4-216ENST00000636652 DCTN1Q14203 1278 aa17.5■□□□□ 0.39
CHRNA4-216ENST00000636652 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
CHRNA4-216ENST00000636652 MCM10Q7L590 875 aa17.5■□□□□ 0.39
CHRNA4-216ENST00000636652 MARCH10Q8NA82 808 aaPredicted RBP17.5■□□□□ 0.39
CHRNA4-216ENST00000636652 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
CHRNA4-216ENST00000636652 RGS12O14924 1447 aa17.49■□□□□ 0.39
CHRNA4-216ENST00000636652 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
CHRNA4-216ENST00000636652 IL16Q14005 1332 aa17.48■□□□□ 0.39
CHRNA4-216ENST00000636652 BCL9O00512 1426 aa17.48■□□□□ 0.39
CHRNA4-216ENST00000636652 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
CHRNA4-216ENST00000636652 LGR6Q9HBX8 967 aa17.48■□□□□ 0.39
CHRNA4-216ENST00000636652 MRC1P22897 1456 aa17.48■□□□□ 0.39
CHRNA4-216ENST00000636652 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
CHRNA4-216ENST00000636652 GOLGA2Q08379 1002 aa17.46■□□□□ 0.39
CHRNA4-216ENST00000636652 TEFQ10587 303 aa17.46■□□□□ 0.39
CHRNA4-216ENST00000636652 KRT27Q7Z3Y8 459 aa17.46■□□□□ 0.39
CHRNA4-216ENST00000636652 IFT57Q9NWB7 429 aa17.45■□□□□ 0.38
CHRNA4-216ENST00000636652 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
CHRNA4-216ENST00000636652 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
CHRNA4-216ENST00000636652 SCN11AQ9UI33 1791 aa17.43■□□□□ 0.38
CHRNA4-216ENST00000636652 E9PSI1 815 aa17.43■□□□□ 0.38
CHRNA4-216ENST00000636652 CABP4P57796 275 aa17.43■□□□□ 0.38
CHRNA4-216ENST00000636652 GNAI1P63096 354 aa17.43■□□□□ 0.38
CHRNA4-216ENST00000636652 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
CHRNA4-216ENST00000636652 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
CHRNA4-216ENST00000636652 TOGARAM1Q9Y4F4 1720 aa17.42■□□□□ 0.38
CHRNA4-216ENST00000636652 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
CHRNA4-216ENST00000636652 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
CHRNA4-216ENST00000636652 CHL1O00533 1208 aa17.41■□□□□ 0.38
CHRNA4-216ENST00000636652 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
CHRNA4-216ENST00000636652 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
CHRNA4-216ENST00000636652 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms