RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TIAM2Q8IVF5 1701 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 ARFGEF2Q9Y6D5 1785 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 FER1L6Q2WGJ9 1857 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 C11orf95C9JLR9 678 aaPredicted RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 FYB1O15117 783 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 PLSCR1O15162 318 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 CSB-PGBD3P0DP91 1061 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 HOXC9P31274 260 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 RRS1Q15050 365 aaKnown RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 NBPF6Q5VWK0 638 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 ANKRD24Q8TF21 1146 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 NBPF4Q96M43 638 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 ZNF692Q9BU19 519 aaPredicted RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 CARD10Q9BWT7 1032 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 BCL11BQ9C0K0 894 aaPredicted RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 NLRP2Q9NX02 1062 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 THRAP3Q9Y2W1 955 aaKnown RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 ERBB3P21860 1342 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 MAP3K19Q56UN5 1328 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 TTC21AQ8NDW8 1320 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 BRD4O60885 1362 aaPredicted RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 CICQ96RK0 1608 aaPredicted RBP2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 NRXN2Q9P2S2 1712 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 BCORQ6W2J9 1755 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 SLX4Q8IY92 1834 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 SPEF2Q9C093 1822 aa2.3□□□□□ -2.04
SYNGAP1-216ENST00000636640 KDM3BQ7LBC6 1761 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 WDR90Q96KV7 1748 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 BCL9O00512 1426 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 PARD3Q8TEW0 1356 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 TONSLQ96HA7 1378 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 USP47Q96K76 1375 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 CCDC7Q96M83 1385 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 PNPLA7Q6ZV29 1317 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 EXOC5O00471 708 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 IL2RBP14784 551 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 PRIM1P49642 420 aaKnown RBP2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 SLC15A2Q16348 729 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 HSP90AB2PQ58FF8 381 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 KCNH5Q8NCM2 988 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 NLGN2Q8NFZ4 835 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 DDX54Q8TDD1 881 aaKnown RBP2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 IP6K1Q92551 441 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 AKT1S1Q96B36 256 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 FHDC1Q9C0D6 1143 aaPredicted RBP2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 WWC3Q9ULE0 1092 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 EMILIN1Q9Y6C2 1016 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 UTRNP46939 3433 aa2.29□□□□□ -2.04
SYNGAP1-216ENST00000636640 CEP350Q5VT06 3117 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 LAMB4A4D0S4 1761 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 ANKRD36CQ5JPF3 1778 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 NCAPD2Q15021 1401 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 NSD3Q9BZ95 1437 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 ANKRD36BQ8N2N9 1353 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 CYP27B1O15528 508 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 YY1P25490 414 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 NBPF14Q5TI25 921 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 MSL1Q68DK7 614 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 HDGFL2Q7Z4V5 671 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 COL23A1Q86Y22 540 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 SLC4A9Q96Q91 983 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 SYT17Q9BSW7 474 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 PCGF6Q9BYE7 350 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 SPON1Q9HCB6 807 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 TRPM7Q96QT4 1865 aa2.28□□□□□ -2.04
SYNGAP1-216ENST00000636640 SCN7AQ01118 1682 aa2.28□□□□□ -2.05
SYNGAP1-216ENST00000636640 KDM6AO15550 1401 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 NINLQ9Y2I6 1382 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 ZNF646O15015 1829 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 HSPA5P11021 654 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 YBX3P16989 372 aaKnown RBP eCLIP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 TNNT2P45379 298 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 AMPHP49418 695 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 TRIM26Q12899 539 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 ITPK1Q13572 414 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 AEBP1Q8IUX7 1158 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 KLHL34Q8N239 644 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 ZCRB1Q8TBF4 217 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 SYTL4Q96C24 671 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 COG3Q96JB2 828 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 ARXQ96QS3 562 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 EYA1Q99502 592 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 POLR3GLQ9BT43 218 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 STK32BQ9NY57 414 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 TERF2IPQ9NYB0 399 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 POLKQ9UBT6 870 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 PPP1R1BQ9UD71 204 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 ASAP1Q9ULH1 1129 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 TNRC6CQ9HCJ0 1690 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 MYH3P11055 1940 aa2.27□□□□□ -2.05
SYNGAP1-216ENST00000636640 COL3A1P02461 1466 aaPredicted RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 A0A1B0GUL6 1792 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 INSRP06213 1382 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 DDX60Q8IY21 1712 aaKnown RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 PPM1GO15355 546 aaPredicted RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 CNGB1Q14028 1251 aaPredicted RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 EIF4A2Q14240 407 aaKnown RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 MPRIPQ6WCQ1 1025 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 PELP1Q8IZL8 1130 aaKnown RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 ZNF784Q8NCA9 323 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms