RNA–Protein interactions for RNA: ENST00000636539.1

ARHGEF9-227, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-227	ENST00000636539	FKBP8	Q14318	412 aa		13.85	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	CHRNA2	Q15822	529 aa		13.85	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	TRMT2A	Q8IZ69	625 aa	Known RBP	13.85	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	CCDC9	Q9Y3X0	531 aa	Known RBP	13.85	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	CRYBG1	Q9Y4K1	1723 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	NBPF6	Q5VWK0	638 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	GAS2L2	Q8NHY3	880 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	NBPF4	Q96M43	638 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	PRDM11	Q9NQV5	511 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	AXIN2	Q9Y2T1	843 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	IL16	Q14005	1332 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	ABCC6	O95255	1503 aa		13.84	□□□□□ -0.19
ARHGEF9-227	ENST00000636539	ONECUT3	O60422	494 aa	Predicted RBP	13.83	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	SEPT12	Q8IYM1	358 aa		13.83	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	ERBB3	P21860	1342 aa		13.83	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	MTHFSD	Q2M296	383 aa	Known RBP	13.82	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	GLI3	P10071	1580 aa		13.81	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	FAM83G	A6ND36	823 aa		13.81	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	IRX6	P78412	446 aa	Predicted RBP	13.81	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	THUMPD2	Q9BTF0	503 aa	Known RBP	13.81	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	NLRP2	Q9NX02	1062 aa		13.81	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	LAS1L	Q9Y4W2	734 aa	Known RBP	13.81	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	KRT27	Q7Z3Y8	459 aa		13.8	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	RTF1	Q92541	710 aa	Known RBP	13.8	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	ABCA3	Q99758	1704 aa		13.8	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	NWD2	Q9ULI1	1742 aa		13.8	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	FANCI	Q9NVI1	1328 aa		13.8	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	RRP1	P56182	461 aa	Known RBP	13.79	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	COL18A1	P39060	1754 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539		A0A0G2JS52	829 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	GNAI1	P63096	354 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	MYT1	Q01538	1121 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	DCTN1	Q14203	1278 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	TSR2	Q969E8	191 aa	Known RBP	13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	IFT57	Q9NWB7	429 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	BTG4	Q9NY30	223 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	RNF123	Q5XPI4	1314 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	NCAPD2	Q15021	1401 aa		13.78	□□□□□ -0.2
ARHGEF9-227	ENST00000636539	GNAT3	A8MTJ3	354 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	HTATSF1	O43719	755 aa	Known RBP	13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	AMOT	Q4VCS5	1084 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	MCM10	Q7L590	875 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	RAPGEF4	Q8WZA2	1011 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	RGPD5	Q99666	1765 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	MAP3K5	Q99683	1374 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	CAMTA1	Q9Y6Y1	1673 aa		13.77	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	RGPD2	P0DJD1	1756 aa		13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	PLCH1	Q4KWH8	1693 aa		13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	EVA1C	P58658	441 aa		13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	EXOSC9	Q06265	439 aa	Known RBP	13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	DLG5	Q8TDM6	1919 aa		13.76	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	FAM208A	Q9UK61	1670 aa	Known RBP	13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	WDR17	Q8IZU2	1322 aa		13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	TAT	P17735	454 aa	Predicted RBP	13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	FAM98C	Q17RN3	349 aa	Known RBP	13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	TOM1L2	Q6ZVM7	507 aa		13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	DEFB132	Q7Z7B7	95 aa		13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	CFAP44	Q96MT7	982 aa		13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	BRWD3	Q6RI45	1802 aa		13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	LMO7	Q8WWI1	1683 aa		13.75	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	CT47B1	P0C2W7	299 aa	Predicted RBP	13.74	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	BAG6	P46379	1132 aa		13.74	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	C1orf141	Q5JVX7	400 aa		13.74	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	STRN4	Q9NRL3	753 aa		13.74	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	COL5A2	P05997	1499 aa	Predicted RBP	13.74	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	ZNF853	P0CG23	659 aa		13.73	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	AKAP4	Q5JQC9	854 aa		13.73	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	ERICH6B	Q5W0A0	696 aa		13.73	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	MBIP	Q9NS73	344 aa		13.73	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	COL14A1	Q05707	1796 aa	Known RBP	13.73	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	PLIN1	O60240	522 aa		13.72	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	CANX	P27824	592 aa	Known RBP	13.72	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	CRB1	P82279	1406 aa		13.72	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	SPATA31A5	Q5VU36	1347 aa		13.71	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	SPATA31A7	Q8IWB4	1347 aa		13.71	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	BCAR3	O75815	825 aa		13.71	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	RARS	P54136	660 aa	Known RBP	13.71	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	SPG7	Q9UQ90	795 aa		13.71	□□□□□ -0.21
ARHGEF9-227	ENST00000636539	MEGF6	O75095	1541 aa		13.7	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	LARP1	Q6PKG0	1096 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	CARD10	Q9BWT7	1032 aa		13.7	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	TSPYL4	Q9UJ04	414 aa		13.7	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	PLEKHG2	Q9H7P9	1386 aa		13.7	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	CHL1	O00533	1208 aa		13.69	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	IL17RE	Q8NFR9	667 aa		13.69	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	SMC4	Q9NTJ3	1288 aa		13.69	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	NRAP	Q86VF7	1730 aa		13.68	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	BCL2L13	Q9BXK5	485 aa		13.68	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	LRRC37A3	O60309	1634 aa		13.68	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	RNMT	O43148	476 aa	Known RBP	13.67	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	TEF	Q10587	303 aa		13.67	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	TWISTNB	Q3B726	338 aa	Predicted RBP	13.67	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	MPRIP	Q6WCQ1	1025 aa		13.67	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	FRAT1	Q92837	279 aa	Predicted RBP	13.67	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	ZNF428	Q96B54	188 aa		13.67	□□□□□ -0.22
ARHGEF9-227	ENST00000636539	PPP4R2	Q9NY27	417 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms