RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 STAC3Q96MF2 364 aa9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 CCDC192P0DO97 292 aa9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 TAF7Q15545 349 aaPredicted RBP9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 BMP2KLQ5H9B9 411 aa9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 DHX37Q8IY37 1157 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 PDRG1Q9NUG6 133 aa9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 ZNF530Q6P9A1 599 aaPredicted RBP9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 SPATA32Q96LK8 384 aa9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 DNMBPQ6XZF7 1577 aa9.7□□□□□ -0.86
CACNA1D-209ENST00000636448 KDM2BQ8NHM5 1336 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 RALYLQ86SE5 291 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 RPAP2Q8IXW5 612 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 MAGI1Q96QZ7 1491 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 IQGAP2Q13576 1575 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 KRT85P78386 507 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 NUCB1Q02818 461 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 ESCO1Q5FWF5 840 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 BLOC1S2Q6QNY1 142 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 CCDC82Q8N4S0 544 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 LRRC2Q9BYS8 371 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 V9GYY5 206 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 CLCN1P35523 988 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 FKBP4Q02790 459 aaKnown RBP eCLIP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 TRDNQ13061 729 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 GPATCH8Q9UKJ3 1502 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 NOS1P29475 1434 aa9.69□□□□□ -0.86
CACNA1D-209ENST00000636448 CCT4P50991 539 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 PIBF1Q8WXW3 757 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 RAPGEF4Q8WZA2 1011 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 RNF123Q5XPI4 1314 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 FOXO3O43524 673 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 ADCY5O95622 1261 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 MCM2P49736 904 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 ZC3H6P61129 1189 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 TRIM29Q14134 588 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 STK38Q15208 465 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 CCDC112Q8NEF3 446 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 NUP62CLQ9H1M0 184 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 RTEL1-TNFRSF6BF6WH68 1400 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 BIN1O00499 593 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 HSP90AB4PQ58FF6 505 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 GOLGA6L1Q8N7Z2 621 aa9.68□□□□□ -0.86
CACNA1D-209ENST00000636448 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 PIP4K2AP48426 406 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 HSP90AA4PQ58FG1 418 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 CPLX2Q6PUV4 134 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 UBE2Q2Q8WVN8 375 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 CNPY2Q9Y2B0 182 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 NINLQ9Y2I6 1382 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 CCDC141Q6ZP82 1450 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 RAB11FIP3O75154 756 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 PKP1Q13835 747 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 PDCL2Q8N4E4 241 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 ZFP91Q96JP5 570 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 CCT2P78371 535 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 KLHL40Q2TBA0 621 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 FAM173BQ6P4H8 233 aa9.67□□□□□ -0.86
CACNA1D-209ENST00000636448 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-209ENST00000636448 TTC22Q5TAA0 569 aa9.66□□□□□ -0.86
CACNA1D-209ENST00000636448 CHMP4AQ9BY43 222 aa9.66□□□□□ -0.86
CACNA1D-209ENST00000636448 KIAA0586Q9BVV6 1533 aa9.66□□□□□ -0.86
CACNA1D-209ENST00000636448 PSMA5P28066 241 aa9.66□□□□□ -0.86
CACNA1D-209ENST00000636448 SAMD1Q6SPF0 538 aaPredicted RBP9.66□□□□□ -0.86
CACNA1D-209ENST00000636448 GAS2L3Q86XJ1 694 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 MAP7D2Q96T17 732 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 PRAG1Q86YV5 1406 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 MARCH6O60337 910 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 CFAP65Q6ZU64 1925 aaKnown RBP9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 RBSNQ9H1K0 784 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 ZBTB40Q9NUA8 1239 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 SERPINC1P01008 464 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 PDCP20941 246 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 FLIIQ13045 1269 aa9.65□□□□□ -0.86
CACNA1D-209ENST00000636448 PTCD1O75127 700 aaKnown RBP9.65□□□□□ -0.87
CACNA1D-209ENST00000636448 EVA1CP58658 441 aa9.65□□□□□ -0.87
CACNA1D-209ENST00000636448 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.87
CACNA1D-209ENST00000636448 MAP3K11Q16584 847 aa9.65□□□□□ -0.87
CACNA1D-209ENST00000636448 PPP4R3BQ5MIZ7 849 aa9.65□□□□□ -0.87
CACNA1D-209ENST00000636448 IFT140Q96RY7 1462 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 ALDH1L2Q3SY69 923 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 PPP1R42Q7Z4L9 355 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 UGGT2Q9NYU1 1516 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 DHX16O60231 1041 aaKnown RBP9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 GJB2P29033 226 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 USP48Q86UV5 1035 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 SNRKQ9NRH2 765 aa9.64□□□□□ -0.87
CACNA1D-209ENST00000636448 RALGAPBQ86X10 1494 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms