RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 RBM6P78332 1123 aaKnown RBP11.43□□□□□ -0.58
CDKL5-209ENST00000635828 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
CDKL5-209ENST00000635828 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
CDKL5-209ENST00000635828 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
CDKL5-209ENST00000635828 DISP2A7MBM2 1401 aa11.42□□□□□ -0.58
CDKL5-209ENST00000635828 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
CDKL5-209ENST00000635828 THSD7AQ9UPZ6 1657 aa11.42□□□□□ -0.58
CDKL5-209ENST00000635828 IL2RBP14784 551 aa11.41□□□□□ -0.58
CDKL5-209ENST00000635828 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
CDKL5-209ENST00000635828 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-209ENST00000635828 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-209ENST00000635828 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
CDKL5-209ENST00000635828 CYP27B1O15528 508 aa11.4□□□□□ -0.58
CDKL5-209ENST00000635828 MTHFSDQ2M296 383 aaKnown RBP11.4□□□□□ -0.58
CDKL5-209ENST00000635828 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.58
CDKL5-209ENST00000635828 ONECUT3O60422 494 aaPredicted RBP11.4□□□□□ -0.58
CDKL5-209ENST00000635828 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
CDKL5-209ENST00000635828 KDRP35968 1356 aa11.4□□□□□ -0.58
CDKL5-209ENST00000635828 DCTN1Q14203 1278 aa11.39□□□□□ -0.59
CDKL5-209ENST00000635828 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
CDKL5-209ENST00000635828 DDB1Q16531 1140 aa11.39□□□□□ -0.59
CDKL5-209ENST00000635828 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
CDKL5-209ENST00000635828 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
CDKL5-209ENST00000635828 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
CDKL5-209ENST00000635828 KCNQ2O43526 872 aa11.38□□□□□ -0.59
CDKL5-209ENST00000635828 PARP4Q9UKK3 1724 aaKnown RBP11.38□□□□□ -0.59
CDKL5-209ENST00000635828 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
CDKL5-209ENST00000635828 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
CDKL5-209ENST00000635828 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDKL5-209ENST00000635828 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
CDKL5-209ENST00000635828 TATP17735 454 aaPredicted RBP11.37□□□□□ -0.59
CDKL5-209ENST00000635828 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
CDKL5-209ENST00000635828 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
CDKL5-209ENST00000635828 THRAP3Q9Y2W1 955 aaKnown RBP11.37□□□□□ -0.59
CDKL5-209ENST00000635828 EXOC5O00471 708 aa11.36□□□□□ -0.59
CDKL5-209ENST00000635828 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
CDKL5-209ENST00000635828 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
CDKL5-209ENST00000635828 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
CDKL5-209ENST00000635828 VIRMAQ69YN4 1812 aaKnown RBP11.36□□□□□ -0.59
CDKL5-209ENST00000635828 MCM10Q7L590 875 aa11.35□□□□□ -0.59
CDKL5-209ENST00000635828 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
CDKL5-209ENST00000635828 APAF1O14727 1248 aa11.35□□□□□ -0.59
CDKL5-209ENST00000635828 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
CDKL5-209ENST00000635828 ZNF530Q6P9A1 599 aaPredicted RBP11.35□□□□□ -0.59
CDKL5-209ENST00000635828 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
CDKL5-209ENST00000635828 FCHSD2O94868 740 aa11.34□□□□□ -0.59
CDKL5-209ENST00000635828 PHKG2P15735 406 aa11.34□□□□□ -0.59
CDKL5-209ENST00000635828 SYTL4Q96C24 671 aaPredicted RBP11.34□□□□□ -0.59
CDKL5-209ENST00000635828 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
CDKL5-209ENST00000635828 KCNQ4P56696 695 aa11.33□□□□□ -0.6
CDKL5-209ENST00000635828 DOT1LQ8TEK3 1739 aa11.33□□□□□ -0.6
CDKL5-209ENST00000635828 TRIM37O94972 964 aa11.33□□□□□ -0.6
CDKL5-209ENST00000635828 MIS18AQ9NYP9 233 aa11.33□□□□□ -0.6
CDKL5-209ENST00000635828 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
CDKL5-209ENST00000635828 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
CDKL5-209ENST00000635828 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
CDKL5-209ENST00000635828 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
CDKL5-209ENST00000635828 ITGB4P16144 1822 aa11.31□□□□□ -0.6
CDKL5-209ENST00000635828 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
CDKL5-209ENST00000635828 TRIM35Q9UPQ4 493 aa11.31□□□□□ -0.6
CDKL5-209ENST00000635828 PCDH11XQ9BZA7 1347 aa11.3□□□□□ -0.6
CDKL5-209ENST00000635828 PCDH11YQ9BZA8 1340 aa11.3□□□□□ -0.6
CDKL5-209ENST00000635828 RIPK4P57078 832 aa11.3□□□□□ -0.6
CDKL5-209ENST00000635828 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
CDKL5-209ENST00000635828 YTHDC1Q96MU7 727 aaKnown RBP11.3□□□□□ -0.6
CDKL5-209ENST00000635828 RUNDC1Q96C34 613 aa11.3□□□□□ -0.6
CDKL5-209ENST00000635828 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
CDKL5-209ENST00000635828 NFATC2IPQ8NCF5 419 aa11.3□□□□□ -0.6
CDKL5-209ENST00000635828 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
CDKL5-209ENST00000635828 KCNQ3O43525 872 aa11.29□□□□□ -0.6
CDKL5-209ENST00000635828 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
CDKL5-209ENST00000635828 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
CDKL5-209ENST00000635828 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
CDKL5-209ENST00000635828 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
CDKL5-209ENST00000635828 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
CDKL5-209ENST00000635828 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
CDKL5-209ENST00000635828 PIGBQ92521 554 aa11.28□□□□□ -0.6
CDKL5-209ENST00000635828 AKAP4Q5JQC9 854 aa11.28□□□□□ -0.6
CDKL5-209ENST00000635828 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
CDKL5-209ENST00000635828 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
CDKL5-209ENST00000635828 GNAT3A8MTJ3 354 aa11.27□□□□□ -0.6
CDKL5-209ENST00000635828 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.6
CDKL5-209ENST00000635828 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.6
CDKL5-209ENST00000635828 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
CDKL5-209ENST00000635828 MAP3K5Q99683 1374 aa11.27□□□□□ -0.61
CDKL5-209ENST00000635828 BTAF1O14981 1849 aa11.26□□□□□ -0.61
CDKL5-209ENST00000635828 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
CDKL5-209ENST00000635828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDKL5-209ENST00000635828 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
CDKL5-209ENST00000635828 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
CDKL5-209ENST00000635828 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
CDKL5-209ENST00000635828 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
CDKL5-209ENST00000635828 GAS2L2Q8NHY3 880 aa11.25□□□□□ -0.61
CDKL5-209ENST00000635828 TNS1Q9HBL0 1735 aaKnown RBP11.25□□□□□ -0.61
CDKL5-209ENST00000635828 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
CDKL5-209ENST00000635828 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
CDKL5-209ENST00000635828 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDKL5-209ENST00000635828 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
CDKL5-209ENST00000635828 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms