RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 CTHP32929 405 aa10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 RNF135Q8IUD6 432 aa10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 SCUBE3Q8IX30 993 aa10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 PHTF2Q8N3S3 785 aa10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 PLPP7Q8NBV4 271 aa10.91□□□□□ -0.66
SMARCA2-244ENST00000635659 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
SMARCA2-244ENST00000635659 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
SMARCA2-244ENST00000635659 CCNYL3P0C7X3 344 aa10.9□□□□□ -0.66
SMARCA2-244ENST00000635659 ERCC3P19447 782 aa10.9□□□□□ -0.66
SMARCA2-244ENST00000635659 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
SMARCA2-244ENST00000635659 CHIC2Q9UKJ5 165 aa10.9□□□□□ -0.66
SMARCA2-244ENST00000635659 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
SMARCA2-244ENST00000635659 APLP1P51693 650 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 MAP7D1Q3KQU3 841 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 NBPF14Q5TI25 921 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 EVA1BQ9NVM1 165 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 PCDHB9Q9Y5E1 797 aa10.89□□□□□ -0.67
SMARCA2-244ENST00000635659 NUP153P49790 1475 aaKnown RBP10.88□□□□□ -0.67
SMARCA2-244ENST00000635659 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
SMARCA2-244ENST00000635659 PPP4CP60510 307 aa10.88□□□□□ -0.67
SMARCA2-244ENST00000635659 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
SMARCA2-244ENST00000635659 FHOD3Q2V2M9 1422 aa10.88□□□□□ -0.67
SMARCA2-244ENST00000635659 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
SMARCA2-244ENST00000635659 ABCA9Q8IUA7 1624 aa10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 ST18O60284 1047 aa10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 DXOO77932 396 aaKnown RBP10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 KCNH2Q12809 1159 aa10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 EML3Q32P44 896 aa10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 ATP10BO94823 1461 aa10.87□□□□□ -0.67
SMARCA2-244ENST00000635659 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
SMARCA2-244ENST00000635659 SOWAHDA6NJG2 315 aa10.86□□□□□ -0.67
SMARCA2-244ENST00000635659 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
SMARCA2-244ENST00000635659 EMP3P54852 163 aa10.86□□□□□ -0.67
SMARCA2-244ENST00000635659 DNAJC14Q6Y2X3 702 aaPredicted RBP10.86□□□□□ -0.67
SMARCA2-244ENST00000635659 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
SMARCA2-244ENST00000635659 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 TRIM50Q86XT4 487 aa10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 OGFOD1Q8N543 542 aa10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 TSR3Q9UJK0 312 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-244ENST00000635659 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 ATP1A2P50993 1020 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 MMP16P51512 607 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 DPYDQ12882 1025 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 C1orf216Q8TAB5 229 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 TEX14Q8IWB6 1497 aa10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 COL17A1Q9UMD9 1497 aaPredicted RBP10.84□□□□□ -0.67
SMARCA2-244ENST00000635659 ARHGAP35Q9NRY4 1499 aa10.83□□□□□ -0.68
SMARCA2-244ENST00000635659 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
SMARCA2-244ENST00000635659 HRO43593 1189 aa10.83□□□□□ -0.68
SMARCA2-244ENST00000635659 IGSF3O75054 1194 aa10.83□□□□□ -0.68
SMARCA2-244ENST00000635659 ARHGAP9Q9BRR9 750 aa10.83□□□□□ -0.68
SMARCA2-244ENST00000635659 CLDN10P78369 228 aa10.82□□□□□ -0.68
SMARCA2-244ENST00000635659 DNAAF2Q9NVR5 837 aaKnown RBP10.82□□□□□ -0.68
SMARCA2-244ENST00000635659 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
SMARCA2-244ENST00000635659 SERPINB4P48594 390 aa10.81□□□□□ -0.68
SMARCA2-244ENST00000635659 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
SMARCA2-244ENST00000635659 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
SMARCA2-244ENST00000635659 HECW1Q76N89 1606 aa10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 BCAMP50895 628 aa10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 SIX5Q8N196 739 aa10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 ZNF594Q96JF6 807 aaPredicted RBP10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 SPSB2Q99619 263 aa10.8□□□□□ -0.68
SMARCA2-244ENST00000635659 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
SMARCA2-244ENST00000635659 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
SMARCA2-244ENST00000635659 FAM205CA6NFA0 338 aa10.79□□□□□ -0.68
SMARCA2-244ENST00000635659 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
SMARCA2-244ENST00000635659 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
SMARCA2-244ENST00000635659 CD109Q6YHK3 1445 aa10.78□□□□□ -0.68
SMARCA2-244ENST00000635659 DKK1O94907 266 aa10.78□□□□□ -0.68
SMARCA2-244ENST00000635659 PRDM9Q9NQV7 894 aa10.78□□□□□ -0.68
SMARCA2-244ENST00000635659 DOLKQ9UPQ8 538 aa10.78□□□□□ -0.68
SMARCA2-244ENST00000635659 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.68
SMARCA2-244ENST00000635659 FRMPD1Q5SYB0 1578 aa10.77□□□□□ -0.68
SMARCA2-244ENST00000635659 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.69
SMARCA2-244ENST00000635659 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.69
SMARCA2-244ENST00000635659 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
SMARCA2-244ENST00000635659 MARSP56192 900 aaKnown RBP10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 NOM1Q5C9Z4 860 aaKnown RBP10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 SIRT1Q96EB6 747 aa10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 CCDC85AQ96PX6 553 aaPredicted RBP10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 UNC93B1Q9H1C4 597 aa10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 IGSF5Q9NSI5 407 aa10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 EGFL7Q9UHF1 273 aa10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 KIAA1024Q9UPX6 916 aa10.76□□□□□ -0.69
SMARCA2-244ENST00000635659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCA2-244ENST00000635659 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
SMARCA2-244ENST00000635659 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms