RNA–Protein interactions for RNA: ENST00000629504.1

GABARAPL1-219, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 4 BASIC

Gene GABARAPL1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-219ENST00000629504 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
GABARAPL1-219ENST00000629504 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
GABARAPL1-219ENST00000629504 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
GABARAPL1-219ENST00000629504 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
GABARAPL1-219ENST00000629504 COG3Q96JB2 828 aa17.21■□□□□ 0.35
GABARAPL1-219ENST00000629504 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
GABARAPL1-219ENST00000629504 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
GABARAPL1-219ENST00000629504 USP47Q96K76 1375 aa17.2■□□□□ 0.34
GABARAPL1-219ENST00000629504 AMPHP49418 695 aa17.2■□□□□ 0.34
GABARAPL1-219ENST00000629504 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
GABARAPL1-219ENST00000629504 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
GABARAPL1-219ENST00000629504 MSH5O43196 834 aa17.19■□□□□ 0.34
GABARAPL1-219ENST00000629504 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
GABARAPL1-219ENST00000629504 HOXC9P31274 260 aa17.18■□□□□ 0.34
GABARAPL1-219ENST00000629504 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
GABARAPL1-219ENST00000629504 NSD2O96028 1365 aa17.17■□□□□ 0.34
GABARAPL1-219ENST00000629504 LY75O60449 1722 aa17.17■□□□□ 0.34
GABARAPL1-219ENST00000629504 YBX3P16989 372 aaKnown RBP eCLIP17.17■□□□□ 0.34
GABARAPL1-219ENST00000629504 KCNQ4P56696 695 aa17.17■□□□□ 0.34
GABARAPL1-219ENST00000629504 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
GABARAPL1-219ENST00000629504 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
GABARAPL1-219ENST00000629504 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
GABARAPL1-219ENST00000629504 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
GABARAPL1-219ENST00000629504 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
GABARAPL1-219ENST00000629504 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
GABARAPL1-219ENST00000629504 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
GABARAPL1-219ENST00000629504 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
GABARAPL1-219ENST00000629504 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
GABARAPL1-219ENST00000629504 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
GABARAPL1-219ENST00000629504 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
GABARAPL1-219ENST00000629504 HSPA6P17066 643 aa17.11■□□□□ 0.33
GABARAPL1-219ENST00000629504 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
GABARAPL1-219ENST00000629504 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
GABARAPL1-219ENST00000629504 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
GABARAPL1-219ENST00000629504 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
GABARAPL1-219ENST00000629504 NBPF6Q5VWK0 638 aa17.1■□□□□ 0.33
GABARAPL1-219ENST00000629504 NBPF4Q96M43 638 aa17.1■□□□□ 0.33
GABARAPL1-219ENST00000629504 MEGF6O75095 1541 aa17.1■□□□□ 0.33
GABARAPL1-219ENST00000629504 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
GABARAPL1-219ENST00000629504 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
GABARAPL1-219ENST00000629504 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
GABARAPL1-219ENST00000629504 ADCY9O60503 1353 aa17.07■□□□□ 0.32
GABARAPL1-219ENST00000629504 AK7Q96M32 723 aa17.07■□□□□ 0.32
GABARAPL1-219ENST00000629504 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
GABARAPL1-219ENST00000629504 TESK2Q96S53 571 aa17.06■□□□□ 0.32
GABARAPL1-219ENST00000629504 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
GABARAPL1-219ENST00000629504 INSRP06213 1382 aa17.05■□□□□ 0.32
GABARAPL1-219ENST00000629504 FYB1O15117 783 aa17.05■□□□□ 0.32
GABARAPL1-219ENST00000629504 SSFA2P28290 1259 aa17.05■□□□□ 0.32
GABARAPL1-219ENST00000629504 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
GABARAPL1-219ENST00000629504 FBLN1P23142 703 aa17.04■□□□□ 0.32
GABARAPL1-219ENST00000629504 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
GABARAPL1-219ENST00000629504 C5P01031 1676 aa17.04■□□□□ 0.32
GABARAPL1-219ENST00000629504 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
GABARAPL1-219ENST00000629504 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
GABARAPL1-219ENST00000629504 NKX1-1Q15270 411 aaPredicted RBP17.02■□□□□ 0.32
GABARAPL1-219ENST00000629504 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
GABARAPL1-219ENST00000629504 FLT4P35916 1363 aa17.02■□□□□ 0.31
GABARAPL1-219ENST00000629504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
GABARAPL1-219ENST00000629504 CYP27B1O15528 508 aa17.01■□□□□ 0.31
GABARAPL1-219ENST00000629504 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
GABARAPL1-219ENST00000629504 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
GABARAPL1-219ENST00000629504 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
GABARAPL1-219ENST00000629504 TMF1P82094 1093 aa17■□□□□ 0.31
GABARAPL1-219ENST00000629504 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
GABARAPL1-219ENST00000629504 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
GABARAPL1-219ENST00000629504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
GABARAPL1-219ENST00000629504 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
GABARAPL1-219ENST00000629504 C4BP0C0L5 1744 aa16.99■□□□□ 0.31
GABARAPL1-219ENST00000629504 APLP1P51693 650 aa16.99■□□□□ 0.31
GABARAPL1-219ENST00000629504 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
GABARAPL1-219ENST00000629504 SIK1P57059 783 aa16.98■□□□□ 0.31
GABARAPL1-219ENST00000629504 TGFB2P61812 414 aa16.98■□□□□ 0.31
GABARAPL1-219ENST00000629504 PIGBQ92521 554 aa16.98■□□□□ 0.31
GABARAPL1-219ENST00000629504 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
GABARAPL1-219ENST00000629504 KIF3CO14782 793 aa16.97■□□□□ 0.31
GABARAPL1-219ENST00000629504 PHF14O94880 888 aa16.97■□□□□ 0.31
GABARAPL1-219ENST00000629504 TOMM70O94826 608 aa16.96■□□□□ 0.31
GABARAPL1-219ENST00000629504 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
GABARAPL1-219ENST00000629504 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
GABARAPL1-219ENST00000629504 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
GABARAPL1-219ENST00000629504 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
GABARAPL1-219ENST00000629504 GNPATO15228 680 aa16.93■□□□□ 0.3
GABARAPL1-219ENST00000629504 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
GABARAPL1-219ENST00000629504 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
GABARAPL1-219ENST00000629504 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
GABARAPL1-219ENST00000629504 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
GABARAPL1-219ENST00000629504 MMP10P09238 476 aa16.92■□□□□ 0.3
GABARAPL1-219ENST00000629504 ADRA2BP18089 450 aa16.92■□□□□ 0.3
GABARAPL1-219ENST00000629504 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
GABARAPL1-219ENST00000629504 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
GABARAPL1-219ENST00000629504 WASHC2AQ641Q2 1341 aa16.92■□□□□ 0.3
GABARAPL1-219ENST00000629504 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
GABARAPL1-219ENST00000629504 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
GABARAPL1-219ENST00000629504 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
GABARAPL1-219ENST00000629504 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
GABARAPL1-219ENST00000629504 ITGB4P16144 1822 aa16.9■□□□□ 0.3
GABARAPL1-219ENST00000629504 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
GABARAPL1-219ENST00000629504 ITPK1Q13572 414 aa16.89■□□□□ 0.29
GABARAPL1-219ENST00000629504 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms