RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 LHX8Q68G74 356 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 PEAK1Q9H792 1746 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 EP400Q96L91 3159 aa12.69□□□□□ -0.38
SPTAN1-218ENST00000629137 ABCC6O95255 1503 aa12.69□□□□□ -0.38
SPTAN1-218ENST00000629137 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
SPTAN1-218ENST00000629137 USP35Q9P2H5 1018 aa12.69□□□□□ -0.38
SPTAN1-218ENST00000629137 KNSTRNQ9Y448 316 aa12.69□□□□□ -0.38
SPTAN1-218ENST00000629137 SPATA31A1Q5TZJ5 1347 aa12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 HOXC9P31274 260 aa12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-218ENST00000629137 IP6K1Q92551 441 aa12.67□□□□□ -0.38
SPTAN1-218ENST00000629137 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
SPTAN1-218ENST00000629137 CRB1P82279 1406 aa12.67□□□□□ -0.38
SPTAN1-218ENST00000629137 NSD2O96028 1365 aa12.67□□□□□ -0.38
SPTAN1-218ENST00000629137 WDR17Q8IZU2 1322 aa12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 AMPHP49418 695 aa12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 CNGB1Q14028 1251 aaPredicted RBP12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 BRWD3Q6RI45 1802 aa12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 THSD7AQ9UPZ6 1657 aa12.66□□□□□ -0.38
SPTAN1-218ENST00000629137 ERBB3P21860 1342 aa12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 CSB-PGBD3P0DP91 1061 aa12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 GSE1Q14687 1217 aa12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
SPTAN1-218ENST00000629137 A0A0G2JS52 829 aa12.64□□□□□ -0.39
SPTAN1-218ENST00000629137 MYT1Q01538 1121 aa12.64□□□□□ -0.39
SPTAN1-218ENST00000629137 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
SPTAN1-218ENST00000629137 MORC1Q86VD1 984 aa12.64□□□□□ -0.39
SPTAN1-218ENST00000629137 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
SPTAN1-218ENST00000629137 MAP2P11137 1827 aaKnown RBP12.64□□□□□ -0.39
SPTAN1-218ENST00000629137 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
SPTAN1-218ENST00000629137 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
SPTAN1-218ENST00000629137 TIE1P35590 1138 aa12.63□□□□□ -0.39
SPTAN1-218ENST00000629137 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
SPTAN1-218ENST00000629137 FLT4P35916 1363 aa12.63□□□□□ -0.39
SPTAN1-218ENST00000629137 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
SPTAN1-218ENST00000629137 SOCS7O14512 581 aa12.62□□□□□ -0.39
SPTAN1-218ENST00000629137 BARGINQ6ZT62 677 aa12.62□□□□□ -0.39
SPTAN1-218ENST00000629137 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
SPTAN1-218ENST00000629137 FAM208AQ9UK61 1670 aaKnown RBP12.61□□□□□ -0.39
SPTAN1-218ENST00000629137 INSRP06213 1382 aa12.61□□□□□ -0.39
SPTAN1-218ENST00000629137 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
SPTAN1-218ENST00000629137 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
SPTAN1-218ENST00000629137 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
SPTAN1-218ENST00000629137 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
SPTAN1-218ENST00000629137 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 NPC1L1Q9UHC9 1359 aa12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 TTLL13PA6NNM8 815 aa12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 DISP2A7MBM2 1401 aa12.6□□□□□ -0.39
SPTAN1-218ENST00000629137 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
SPTAN1-218ENST00000629137 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
SPTAN1-218ENST00000629137 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
SPTAN1-218ENST00000629137 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-218ENST00000629137 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
SPTAN1-218ENST00000629137 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
SPTAN1-218ENST00000629137 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
SPTAN1-218ENST00000629137 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
SPTAN1-218ENST00000629137 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
SPTAN1-218ENST00000629137 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
SPTAN1-218ENST00000629137 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.4
SPTAN1-218ENST00000629137 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
SPTAN1-218ENST00000629137 C7P10643 843 aa12.55□□□□□ -0.4
SPTAN1-218ENST00000629137 IL2RBP14784 551 aa12.55□□□□□ -0.4
SPTAN1-218ENST00000629137 MTHFSP49914 203 aa12.55□□□□□ -0.4
SPTAN1-218ENST00000629137 DDB1Q16531 1140 aa12.55□□□□□ -0.4
SPTAN1-218ENST00000629137 MEGF6O75095 1541 aa12.55□□□□□ -0.4
SPTAN1-218ENST00000629137 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-218ENST00000629137 EYA1Q99502 592 aa12.54□□□□□ -0.4
SPTAN1-218ENST00000629137 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
SPTAN1-218ENST00000629137 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-218ENST00000629137 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
SPTAN1-218ENST00000629137 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
SPTAN1-218ENST00000629137 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
SPTAN1-218ENST00000629137 SHANK3Q9BYB0 1731 aa12.52□□□□□ -0.41
SPTAN1-218ENST00000629137 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
SPTAN1-218ENST00000629137 MARCH10Q8NA82 808 aaPredicted RBP12.52□□□□□ -0.41
SPTAN1-218ENST00000629137 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
SPTAN1-218ENST00000629137 COL3A1P02461 1466 aaPredicted RBP12.52□□□□□ -0.41
SPTAN1-218ENST00000629137 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
SPTAN1-218ENST00000629137 EXOC5O00471 708 aa12.51□□□□□ -0.41
SPTAN1-218ENST00000629137 IL13P35225 146 aa12.51□□□□□ -0.41
SPTAN1-218ENST00000629137 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
SPTAN1-218ENST00000629137 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
SPTAN1-218ENST00000629137 IGSF1Q8N6C5 1336 aa12.5□□□□□ -0.41
SPTAN1-218ENST00000629137 AEBP1Q8IUX7 1158 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms