RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 U2AF1L5P0DN76 240 aaPredicted RBP13.33□□□□□ -0.28
LINC01943-202ENST00000628090 U2AF1Q01081 240 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01943-202ENST00000628090 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
LINC01943-202ENST00000628090 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
LINC01943-202ENST00000628090 DISP2A7MBM2 1401 aa13.32□□□□□ -0.28
LINC01943-202ENST00000628090 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
LINC01943-202ENST00000628090 SMG6Q86US8 1419 aaKnown RBP13.31□□□□□ -0.28
LINC01943-202ENST00000628090 U2SURPO15042 1029 aaKnown RBP13.31□□□□□ -0.28
LINC01943-202ENST00000628090 KCNH5Q8NCM2 988 aa13.31□□□□□ -0.28
LINC01943-202ENST00000628090 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
LINC01943-202ENST00000628090 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
LINC01943-202ENST00000628090 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
LINC01943-202ENST00000628090 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
LINC01943-202ENST00000628090 NFAT5O94916 1531 aa13.29□□□□□ -0.28
LINC01943-202ENST00000628090 DDB1Q16531 1140 aa13.29□□□□□ -0.28
LINC01943-202ENST00000628090 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
LINC01943-202ENST00000628090 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
LINC01943-202ENST00000628090 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
LINC01943-202ENST00000628090 PARP4Q9UKK3 1724 aaKnown RBP13.28□□□□□ -0.28
LINC01943-202ENST00000628090 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
LINC01943-202ENST00000628090 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
LINC01943-202ENST00000628090 OVOS2A0A0J9YW53 1432 aa13.28□□□□□ -0.28
LINC01943-202ENST00000628090 OVOS2Q6IE36 1432 aa13.28□□□□□ -0.28
LINC01943-202ENST00000628090 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
LINC01943-202ENST00000628090 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
LINC01943-202ENST00000628090 APAF1O14727 1248 aa13.26□□□□□ -0.29
LINC01943-202ENST00000628090 FCHSD2O94868 740 aa13.26□□□□□ -0.29
LINC01943-202ENST00000628090 FBLN1P23142 703 aa13.26□□□□□ -0.29
LINC01943-202ENST00000628090 AMPHP49418 695 aa13.26□□□□□ -0.29
LINC01943-202ENST00000628090 KIF24Q5T7B8 1368 aa13.26□□□□□ -0.29
LINC01943-202ENST00000628090 PEAK1Q9H792 1746 aa13.26□□□□□ -0.29
LINC01943-202ENST00000628090 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
LINC01943-202ENST00000628090 PROM2Q8N271 834 aa13.25□□□□□ -0.29
LINC01943-202ENST00000628090 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
LINC01943-202ENST00000628090 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
LINC01943-202ENST00000628090 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
LINC01943-202ENST00000628090 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
LINC01943-202ENST00000628090 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
LINC01943-202ENST00000628090 LRP5O75197 1615 aa13.24□□□□□ -0.29
LINC01943-202ENST00000628090 FLT4P35916 1363 aa13.23□□□□□ -0.29
LINC01943-202ENST00000628090 EXOC5O00471 708 aa13.23□□□□□ -0.29
LINC01943-202ENST00000628090 RRS1Q15050 365 aaKnown RBP13.23□□□□□ -0.29
LINC01943-202ENST00000628090 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
LINC01943-202ENST00000628090 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
LINC01943-202ENST00000628090 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
LINC01943-202ENST00000628090 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
LINC01943-202ENST00000628090 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
LINC01943-202ENST00000628090 E9PSI1 815 aa13.22□□□□□ -0.29
LINC01943-202ENST00000628090 KCNQ2O43526 872 aa13.22□□□□□ -0.29
LINC01943-202ENST00000628090 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
LINC01943-202ENST00000628090 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
LINC01943-202ENST00000628090 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
LINC01943-202ENST00000628090 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
LINC01943-202ENST00000628090 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
LINC01943-202ENST00000628090 NUP188Q5SRE5 1749 aa13.22□□□□□ -0.29
LINC01943-202ENST00000628090 RREB1Q92766 1687 aa13.21□□□□□ -0.29
LINC01943-202ENST00000628090 ERBB3P21860 1342 aa13.21□□□□□ -0.29
LINC01943-202ENST00000628090 PLSCR1O15162 318 aa13.21□□□□□ -0.29
LINC01943-202ENST00000628090 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
LINC01943-202ENST00000628090 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
LINC01943-202ENST00000628090 WDR63Q8IWG1 891 aa13.21□□□□□ -0.29
LINC01943-202ENST00000628090 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
LINC01943-202ENST00000628090 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
LINC01943-202ENST00000628090 IL13P35225 146 aa13.2□□□□□ -0.3
LINC01943-202ENST00000628090 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
LINC01943-202ENST00000628090 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
LINC01943-202ENST00000628090 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
LINC01943-202ENST00000628090 PDGFDQ9GZP0 370 aaPredicted RBP13.2□□□□□ -0.3
LINC01943-202ENST00000628090 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
LINC01943-202ENST00000628090 FKBP8Q14318 412 aa13.19□□□□□ -0.3
LINC01943-202ENST00000628090 IP6K1Q92551 441 aa13.19□□□□□ -0.3
LINC01943-202ENST00000628090 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
LINC01943-202ENST00000628090 LTN1O94822 1766 aa13.19□□□□□ -0.3
LINC01943-202ENST00000628090 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
LINC01943-202ENST00000628090 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
LINC01943-202ENST00000628090 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
LINC01943-202ENST00000628090 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
LINC01943-202ENST00000628090 RCAN3Q9UKA8 241 aa13.18□□□□□ -0.3
LINC01943-202ENST00000628090 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
LINC01943-202ENST00000628090 BCL9O00512 1426 aa13.17□□□□□ -0.3
LINC01943-202ENST00000628090 IL2RBP14784 551 aa13.17□□□□□ -0.3
LINC01943-202ENST00000628090 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
LINC01943-202ENST00000628090 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
LINC01943-202ENST00000628090 RIPK4P57078 832 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
LINC01943-202ENST00000628090 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 RSPH6AQ9H0K4 717 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 ABCC6O95255 1503 aa13.16□□□□□ -0.3
LINC01943-202ENST00000628090 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
LINC01943-202ENST00000628090 UTRNP46939 3433 aa13.15□□□□□ -0.3
LINC01943-202ENST00000628090 CAPN15O75808 1086 aa13.15□□□□□ -0.3
LINC01943-202ENST00000628090 HMOX1P09601 288 aa13.15□□□□□ -0.3
LINC01943-202ENST00000628090 HOXC9P31274 260 aa13.15□□□□□ -0.3
LINC01943-202ENST00000628090 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
LINC01943-202ENST00000628090 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
LINC01943-202ENST00000628090 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms