RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 KDRP35968 1356 aa25.12■■□□□ 1.61
MECP2-216ENST00000627864 EXOC5O00471 708 aa25.11■■□□□ 1.61
MECP2-216ENST00000627864 DDB1Q16531 1140 aa25.11■■□□□ 1.61
MECP2-216ENST00000627864 KAT6BQ8WYB5 2073 aa25.1■■□□□ 1.61
MECP2-216ENST00000627864 OVOS2A0A0G2JMS6 1433 aa25.1■■□□□ 1.61
MECP2-216ENST00000627864 PKD1L3Q7Z443 1732 aa25.09■■□□□ 1.61
MECP2-216ENST00000627864 SHANK3Q9BYB0 1731 aa25.09■■□□□ 1.61
MECP2-216ENST00000627864 CCER2I3L3R5 266 aa25.08■■□□□ 1.61
MECP2-216ENST00000627864 FCHSD2O94868 740 aa25.08■■□□□ 1.61
MECP2-216ENST00000627864 ZCRB1Q8TBF4 217 aaKnown RBP25.08■■□□□ 1.61
MECP2-216ENST00000627864 RSPH6AQ9H0K4 717 aa25.08■■□□□ 1.61
MECP2-216ENST00000627864 PRKAR2BP31323 418 aa25.07■■□□□ 1.6
MECP2-216ENST00000627864 PDE3BQ13370 1112 aa25.07■■□□□ 1.6
MECP2-216ENST00000627864 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
MECP2-216ENST00000627864 ADAMTS8Q9UP79 889 aa25.06■■□□□ 1.6
MECP2-216ENST00000627864 TNS2Q63HR2 1409 aa25.05■■□□□ 1.6
MECP2-216ENST00000627864 PLEKHO1Q53GL0 409 aaPredicted RBP25.05■■□□□ 1.6
MECP2-216ENST00000627864 SPG7Q9UQ90 795 aa25.05■■□□□ 1.6
MECP2-216ENST00000627864 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
MECP2-216ENST00000627864 DDX54Q8TDD1 881 aaKnown RBP25.04■■□□□ 1.6
MECP2-216ENST00000627864 PNNQ9H307 717 aaKnown RBP25.03■■□□□ 1.6
MECP2-216ENST00000627864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.03■■□□□ 1.6
MECP2-216ENST00000627864 AMOTQ4VCS5 1084 aa25.02■■□□□ 1.6
MECP2-216ENST00000627864 VIRMAQ69YN4 1812 aaKnown RBP25.01■■□□□ 1.59
MECP2-216ENST00000627864 NEFMP07197 916 aa25.01■■□□□ 1.59
MECP2-216ENST00000627864 PHACTR3Q96KR7 559 aa25.01■■□□□ 1.59
MECP2-216ENST00000627864 PLEKHG2Q9H7P9 1386 aa25.01■■□□□ 1.59
MECP2-216ENST00000627864 FAM182BQ5T319 152 aa25■■□□□ 1.59
MECP2-216ENST00000627864 FAM9BQ8IZU0 186 aa25■■□□□ 1.59
MECP2-216ENST00000627864 MARCH10Q8NA82 808 aaPredicted RBP25■■□□□ 1.59
MECP2-216ENST00000627864 PCDH11XQ9BZA7 1347 aa25■■□□□ 1.59
MECP2-216ENST00000627864 PCDH11YQ9BZA8 1340 aa25■■□□□ 1.59
MECP2-216ENST00000627864 DLG5Q8TDM6 1919 aa25■■□□□ 1.59
MECP2-216ENST00000627864 ZNF530Q6P9A1 599 aaPredicted RBP24.99■■□□□ 1.59
MECP2-216ENST00000627864 CCDC146Q8IYE0 955 aa24.99■■□□□ 1.59
MECP2-216ENST00000627864 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
MECP2-216ENST00000627864 PLEKHF1Q96S99 279 aa24.98■■□□□ 1.59
MECP2-216ENST00000627864 MAPK8IP3Q9UPT6 1336 aa24.97■■□□□ 1.59
MECP2-216ENST00000627864 CYP27B1O15528 508 aa24.97■■□□□ 1.59
MECP2-216ENST00000627864 ILDR2Q71H61 639 aa24.97■■□□□ 1.59
MECP2-216ENST00000627864 SBF2Q86WG5 1849 aa24.97■■□□□ 1.59
MECP2-216ENST00000627864 IFNL2Q8IZJ0 200 aa24.96■■□□□ 1.59
MECP2-216ENST00000627864 C1orf141Q5JVX7 400 aa24.95■■□□□ 1.58
MECP2-216ENST00000627864 RUNDC1Q96C34 613 aa24.95■■□□□ 1.58
MECP2-216ENST00000627864 PHKG2P15735 406 aa24.94■■□□□ 1.58
MECP2-216ENST00000627864 GAS2L2Q8NHY3 880 aa24.94■■□□□ 1.58
MECP2-216ENST00000627864 SCN11AQ9UI33 1791 aa24.92■■□□□ 1.58
MECP2-216ENST00000627864 ITGB4P16144 1822 aa24.91■■□□□ 1.58
MECP2-216ENST00000627864 AKAP4Q5JQC9 854 aa24.91■■□□□ 1.58
MECP2-216ENST00000627864 FAM196AQ6ZSG2 479 aa24.91■■□□□ 1.58
MECP2-216ENST00000627864 DOT1LQ8TEK3 1739 aa24.91■■□□□ 1.58
MECP2-216ENST00000627864 NFE2L2Q16236 605 aa24.89■■□□□ 1.58
MECP2-216ENST00000627864 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
MECP2-216ENST00000627864 NKX1-1Q15270 411 aaPredicted RBP24.88■■□□□ 1.57
MECP2-216ENST00000627864 MPRIPQ6WCQ1 1025 aa24.88■■□□□ 1.57
MECP2-216ENST00000627864 TOGARAM1Q9Y4F4 1720 aa24.88■■□□□ 1.57
MECP2-216ENST00000627864 GNAT3A8MTJ3 354 aa24.87■■□□□ 1.57
MECP2-216ENST00000627864 ACSBG1Q96GR2 724 aa24.87■■□□□ 1.57
MECP2-216ENST00000627864 MAP3K5Q99683 1374 aa24.87■■□□□ 1.57
MECP2-216ENST00000627864 APAF1O14727 1248 aa24.86■■□□□ 1.57
MECP2-216ENST00000627864 TMPOP42166 694 aaKnown RBP24.86■■□□□ 1.57
MECP2-216ENST00000627864 RRP7AQ9Y3A4 280 aaKnown RBP24.86■■□□□ 1.57
MECP2-216ENST00000627864 NEUROD2Q15784 382 aa24.85■■□□□ 1.57
MECP2-216ENST00000627864 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
MECP2-216ENST00000627864 BCL9O00512 1426 aa24.85■■□□□ 1.57
MECP2-216ENST00000627864 RIPK4P57078 832 aa24.84■■□□□ 1.57
MECP2-216ENST00000627864 NHSQ6T4R5 1651 aa24.84■■□□□ 1.57
MECP2-216ENST00000627864 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
MECP2-216ENST00000627864 RTF1Q92541 710 aaKnown RBP24.83■■□□□ 1.57
MECP2-216ENST00000627864 LGR6Q9HBX8 967 aa24.83■■□□□ 1.57
MECP2-216ENST00000627864 KDM6AO15550 1401 aaPredicted RBP24.83■■□□□ 1.57
MECP2-216ENST00000627864 ADAMTS7Q9UKP4 1686 aa24.82■■□□□ 1.56
MECP2-216ENST00000627864 RNMTO43148 476 aaKnown RBP24.82■■□□□ 1.56
MECP2-216ENST00000627864 TRIM37O94972 964 aa24.82■■□□□ 1.56
MECP2-216ENST00000627864 PRIM1P49642 420 aaKnown RBP24.82■■□□□ 1.56
MECP2-216ENST00000627864 SYTL4Q96C24 671 aaPredicted RBP24.82■■□□□ 1.56
MECP2-216ENST00000627864 KCNQ2O43526 872 aa24.81■■□□□ 1.56
MECP2-216ENST00000627864 BTAF1O14981 1849 aa24.81■■□□□ 1.56
MECP2-216ENST00000627864 HTATSF1O43719 755 aaKnown RBP24.8■■□□□ 1.56
MECP2-216ENST00000627864 IL17REQ8NFR9 667 aa24.8■■□□□ 1.56
MECP2-216ENST00000627864 ERVV-2B6SEH9 535 aa24.79■■□□□ 1.56
MECP2-216ENST00000627864 DCTN1Q14203 1278 aa24.79■■□□□ 1.56
MECP2-216ENST00000627864 MCM10Q7L590 875 aa24.79■■□□□ 1.56
MECP2-216ENST00000627864 CABP4P57796 275 aa24.78■■□□□ 1.56
MECP2-216ENST00000627864 PTF1AQ7RTS3 328 aa24.78■■□□□ 1.56
MECP2-216ENST00000627864 TNS1Q9HBL0 1735 aaKnown RBP24.78■■□□□ 1.56
MECP2-216ENST00000627864 BCL11BQ9C0K0 894 aaPredicted RBP24.77■■□□□ 1.56
MECP2-216ENST00000627864 SIPA1L3O60292 1781 aaPredicted RBP24.77■■□□□ 1.56
MECP2-216ENST00000627864 LMOD3Q0VAK6 560 aa24.76■■□□□ 1.55
MECP2-216ENST00000627864 TMOD3Q9NYL9 352 aa24.76■■□□□ 1.55
MECP2-216ENST00000627864 NFATC2IPQ8NCF5 419 aa24.75■■□□□ 1.55
MECP2-216ENST00000627864 TRIM35Q9UPQ4 493 aa24.75■■□□□ 1.55
MECP2-216ENST00000627864 SALL2Q9Y467 1007 aaPredicted RBP24.75■■□□□ 1.55
MECP2-216ENST00000627864 TEFQ10587 303 aa24.74■■□□□ 1.55
MECP2-216ENST00000627864 THUMPD2Q9BTF0 503 aaKnown RBP24.74■■□□□ 1.55
MECP2-216ENST00000627864 SLC52A2Q9HAB3 445 aa24.74■■□□□ 1.55
MECP2-216ENST00000627864 CEMIPQ8WUJ3 1361 aa24.73■■□□□ 1.55
MECP2-216ENST00000627864 PIGBQ92521 554 aa24.73■■□□□ 1.55
MECP2-216ENST00000627864 SF3B2Q13435 895 aaKnown RBP24.72■■□□□ 1.55
MECP2-216ENST00000627864 MRC1P22897 1456 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms