RNA–Protein interactions for RNA: ENST00000626400.1

AP003500.1-201, humanhuman

TSL 4 BASIC

Gene AP003500.1, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003500.1-201ENST00000626400 SEPT12Q8IYM1 358 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 MEGF6O75095 1541 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
AP003500.1-201ENST00000626400 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
AP003500.1-201ENST00000626400 DIEXFQ68CQ4 756 aaKnown RBP12.8□□□□□ -0.36
AP003500.1-201ENST00000626400 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
AP003500.1-201ENST00000626400 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
AP003500.1-201ENST00000626400 NEFMP07197 916 aa12.79□□□□□ -0.36
AP003500.1-201ENST00000626400 KRT27Q7Z3Y8 459 aa12.79□□□□□ -0.36
AP003500.1-201ENST00000626400 EP400Q96L91 3159 aa12.79□□□□□ -0.36
AP003500.1-201ENST00000626400 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 HSP90AB1P08238 724 aaKnown RBP12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
AP003500.1-201ENST00000626400 A0A0G2JS52 829 aa12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 MYT1Q01538 1121 aa12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 NHSQ6T4R5 1651 aa12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
AP003500.1-201ENST00000626400 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
AP003500.1-201ENST00000626400 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
AP003500.1-201ENST00000626400 U2AF1L5P0DN76 240 aaPredicted RBP12.76□□□□□ -0.37
AP003500.1-201ENST00000626400 U2AF1Q01081 240 aaKnown RBP eCLIP12.76□□□□□ -0.37
AP003500.1-201ENST00000626400 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
AP003500.1-201ENST00000626400 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
AP003500.1-201ENST00000626400 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
AP003500.1-201ENST00000626400 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
AP003500.1-201ENST00000626400 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
AP003500.1-201ENST00000626400 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
AP003500.1-201ENST00000626400 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
AP003500.1-201ENST00000626400 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
AP003500.1-201ENST00000626400 ITGB4P16144 1822 aa12.74□□□□□ -0.37
AP003500.1-201ENST00000626400 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
AP003500.1-201ENST00000626400 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
AP003500.1-201ENST00000626400 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
AP003500.1-201ENST00000626400 MRS2Q9HD23 443 aa12.73□□□□□ -0.37
AP003500.1-201ENST00000626400 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
AP003500.1-201ENST00000626400 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
AP003500.1-201ENST00000626400 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
AP003500.1-201ENST00000626400 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
AP003500.1-201ENST00000626400 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
AP003500.1-201ENST00000626400 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
AP003500.1-201ENST00000626400 HMOX1P09601 288 aa12.71□□□□□ -0.37
AP003500.1-201ENST00000626400 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
AP003500.1-201ENST00000626400 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
AP003500.1-201ENST00000626400 MRC1P22897 1456 aa12.71□□□□□ -0.38
AP003500.1-201ENST00000626400 PHKG2P15735 406 aa12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 MARCH10Q8NA82 808 aaPredicted RBP12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
AP003500.1-201ENST00000626400 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
AP003500.1-201ENST00000626400 BTAF1O14981 1849 aa12.69□□□□□ -0.38
AP003500.1-201ENST00000626400 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
AP003500.1-201ENST00000626400 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
AP003500.1-201ENST00000626400 CYP27B1O15528 508 aa12.69□□□□□ -0.38
AP003500.1-201ENST00000626400 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
AP003500.1-201ENST00000626400 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
AP003500.1-201ENST00000626400 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
AP003500.1-201ENST00000626400 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
AP003500.1-201ENST00000626400 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
AP003500.1-201ENST00000626400 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
AP003500.1-201ENST00000626400 LY75O60449 1722 aa12.66□□□□□ -0.38
AP003500.1-201ENST00000626400 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
AP003500.1-201ENST00000626400 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
AP003500.1-201ENST00000626400 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
AP003500.1-201ENST00000626400 CICQ96RK0 1608 aaPredicted RBP12.66□□□□□ -0.38
AP003500.1-201ENST00000626400 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
AP003500.1-201ENST00000626400 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
AP003500.1-201ENST00000626400 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 PLSCR1O15162 318 aa12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
AP003500.1-201ENST00000626400 TMPOP42166 694 aaKnown RBP12.63□□□□□ -0.39
AP003500.1-201ENST00000626400 BAG6P46379 1132 aa12.63□□□□□ -0.39
AP003500.1-201ENST00000626400 RREB1Q92766 1687 aa12.63□□□□□ -0.39
AP003500.1-201ENST00000626400 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
AP003500.1-201ENST00000626400 SOCS7O14512 581 aa12.62□□□□□ -0.39
AP003500.1-201ENST00000626400 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
AP003500.1-201ENST00000626400 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
AP003500.1-201ENST00000626400 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
AP003500.1-201ENST00000626400 TEFQ10587 303 aa12.61□□□□□ -0.39
AP003500.1-201ENST00000626400 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
AP003500.1-201ENST00000626400 SLC52A2Q9HAB3 445 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms