RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 NEDD1Q8NHV4 660 aa10.19□□□□□ -0.78
TCF4-250ENST00000625849 ITGB2P05107 769 aa10.18□□□□□ -0.78
TCF4-250ENST00000625849 BCRP11274 1271 aa10.18□□□□□ -0.78
TCF4-250ENST00000625849 PRICKLE2Q7Z3G6 844 aa10.18□□□□□ -0.78
TCF4-250ENST00000625849 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
TCF4-250ENST00000625849 GPR25O00155 361 aa10.17□□□□□ -0.78
TCF4-250ENST00000625849 RHOQP17081 205 aa10.17□□□□□ -0.78
TCF4-250ENST00000625849 GALNT6Q8NCL4 622 aa10.17□□□□□ -0.78
TCF4-250ENST00000625849 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
TCF4-250ENST00000625849 PROCP04070 461 aa10.15□□□□□ -0.78
TCF4-250ENST00000625849 DZIP3Q86Y13 1208 aaKnown RBP10.15□□□□□ -0.78
TCF4-250ENST00000625849 RIPOR1Q6ZS17 1223 aa10.14□□□□□ -0.79
TCF4-250ENST00000625849 TRIM52Q96A61 297 aa10.14□□□□□ -0.79
TCF4-250ENST00000625849 ESPNB1AK53 854 aa10.13□□□□□ -0.79
TCF4-250ENST00000625849 DBN1Q16643 649 aa10.13□□□□□ -0.79
TCF4-250ENST00000625849 PPP2R2DQ66LE6 453 aa10.13□□□□□ -0.79
TCF4-250ENST00000625849 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
TCF4-250ENST00000625849 ACDQ96AP0 544 aa10.13□□□□□ -0.79
TCF4-250ENST00000625849 H7C1W4 665 aa10.12□□□□□ -0.79
TCF4-250ENST00000625849 TRERF1Q96PN7 1200 aa10.12□□□□□ -0.79
TCF4-250ENST00000625849 CYLDQ9NQC7 956 aa10.12□□□□□ -0.79
TCF4-250ENST00000625849 GTPBP3Q969Y2 492 aaKnown RBP10.11□□□□□ -0.79
TCF4-250ENST00000625849 LRRC4BQ9NT99 713 aa10.11□□□□□ -0.79
TCF4-250ENST00000625849 GPC1P35052 558 aa10.1□□□□□ -0.79
TCF4-250ENST00000625849 SEPT12Q8IYM1 358 aa10.1□□□□□ -0.79
TCF4-250ENST00000625849 DYRK1BQ9Y463 629 aa10.1□□□□□ -0.79
TCF4-250ENST00000625849 ATP5J2-PTCD1G3V325 749 aa10.09□□□□□ -0.79
TCF4-250ENST00000625849 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
TCF4-250ENST00000625849 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
TCF4-250ENST00000625849 MX2P20592 715 aa10.08□□□□□ -0.8
TCF4-250ENST00000625849 FBXO31Q5XUX0 539 aaPredicted RBP10.08□□□□□ -0.8
TCF4-250ENST00000625849 EPS8L1Q8TE68 723 aa10.08□□□□□ -0.8
TCF4-250ENST00000625849 MEN1O00255 615 aa10.07□□□□□ -0.8
TCF4-250ENST00000625849 AP1G2O75843 785 aa10.07□□□□□ -0.8
TCF4-250ENST00000625849 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
TCF4-250ENST00000625849 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
TCF4-250ENST00000625849 OIP5O43482 229 aa10.06□□□□□ -0.8
TCF4-250ENST00000625849 SLC24A3Q9HC58 644 aa10.06□□□□□ -0.8
TCF4-250ENST00000625849 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.05□□□□□ -0.8
TCF4-250ENST00000625849 BAG6P46379 1132 aa10.04□□□□□ -0.8
TCF4-250ENST00000625849 POU4F2Q12837 409 aa10.04□□□□□ -0.8
TCF4-250ENST00000625849 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
TCF4-250ENST00000625849 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
TCF4-250ENST00000625849 A0A1W2PRU2 124 aa10.03□□□□□ -0.8
TCF4-250ENST00000625849 MAP2K3P46734 347 aa10.03□□□□□ -0.8
TCF4-250ENST00000625849 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
TCF4-250ENST00000625849 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
TCF4-250ENST00000625849 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
TCF4-250ENST00000625849 KRBA1A5PL33 1030 aa10.02□□□□□ -0.81
TCF4-250ENST00000625849 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
TCF4-250ENST00000625849 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
TCF4-250ENST00000625849 OXCT2Q9BYC2 517 aaPredicted RBP10.02□□□□□ -0.81
TCF4-250ENST00000625849 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
TCF4-250ENST00000625849 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
TCF4-250ENST00000625849 NBPF10Q6P3W6 841 aaKnown RBP10.01□□□□□ -0.81
TCF4-250ENST00000625849 ALYREFQ86V81 257 aaKnown RBP10.01□□□□□ -0.81
TCF4-250ENST00000625849 NBPF15Q8N660 670 aa10.01□□□□□ -0.81
TCF4-250ENST00000625849 MKL2Q9ULH7 1088 aa10.01□□□□□ -0.81
TCF4-250ENST00000625849 Q8N3U1 123 aa10□□□□□ -0.81
TCF4-250ENST00000625849 GIGYF1O75420 1035 aaPredicted RBP9.99□□□□□ -0.81
TCF4-250ENST00000625849 WDR44Q5JSH3 913 aa9.99□□□□□ -0.81
TCF4-250ENST00000625849 CCDC125Q86Z20 511 aa9.99□□□□□ -0.81
TCF4-250ENST00000625849 KRTAP4-8Q9BYQ9 185 aa9.99□□□□□ -0.81
TCF4-250ENST00000625849 GRIP2Q9C0E4 1043 aa9.99□□□□□ -0.81
TCF4-250ENST00000625849 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
TCF4-250ENST00000625849 F11P03951 625 aa9.98□□□□□ -0.81
TCF4-250ENST00000625849 ERVK-9P63128 1117 aa9.98□□□□□ -0.81
TCF4-250ENST00000625849 CC2D2BQ6DHV5 1058 aa9.98□□□□□ -0.81
TCF4-250ENST00000625849 TIMMDC1Q9NPL8 285 aa9.98□□□□□ -0.81
TCF4-250ENST00000625849 SHISA8B8ZZ34 492 aa9.97□□□□□ -0.81
TCF4-250ENST00000625849 CLN3Q13286 438 aa9.97□□□□□ -0.81
TCF4-250ENST00000625849 CFHR5Q9BXR6 569 aa9.97□□□□□ -0.81
TCF4-250ENST00000625849 WASLO00401 505 aaPredicted RBP9.96□□□□□ -0.82
TCF4-250ENST00000625849 FURINP09958 794 aa9.96□□□□□ -0.82
TCF4-250ENST00000625849 TAS1R3Q7RTX0 852 aa9.96□□□□□ -0.82
TCF4-250ENST00000625849 CYP2U1Q7Z449 544 aa9.96□□□□□ -0.82
TCF4-250ENST00000625849 RRAGCQ9HB90 399 aa9.96□□□□□ -0.82
TCF4-250ENST00000625849 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
TCF4-250ENST00000625849 COL8A1P27658 744 aa9.95□□□□□ -0.82
TCF4-250ENST00000625849 GDF2Q9UK05 429 aaPredicted RBP9.95□□□□□ -0.82
TCF4-250ENST00000625849 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
TCF4-250ENST00000625849 PHF24Q9UPV7 400 aa9.94□□□□□ -0.82
TCF4-250ENST00000625849 ZBBXA8MT70 800 aa9.93□□□□□ -0.82
TCF4-250ENST00000625849 RNF20Q5VTR2 975 aa9.93□□□□□ -0.82
TCF4-250ENST00000625849 C1orf229Q6ZS94 237 aaPredicted RBP9.93□□□□□ -0.82
TCF4-250ENST00000625849 GRIN2CQ14957 1233 aa9.92□□□□□ -0.82
TCF4-250ENST00000625849 EDARADDQ8WWZ3 215 aa9.92□□□□□ -0.82
TCF4-250ENST00000625849 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
TCF4-250ENST00000625849 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
TCF4-250ENST00000625849 THBS1P07996 1170 aa9.91□□□□□ -0.82
TCF4-250ENST00000625849 TRIM34Q9BYJ4 488 aa9.91□□□□□ -0.82
TCF4-250ENST00000625849 GPAMQ9HCL2 828 aa9.91□□□□□ -0.82
TCF4-250ENST00000625849 SCTRP47872 440 aa9.9□□□□□ -0.82
TCF4-250ENST00000625849 GOLGA6L1Q8N7Z2 621 aa9.9□□□□□ -0.82
TCF4-250ENST00000625849 RFC5P40937 340 aa9.89□□□□□ -0.83
TCF4-250ENST00000625849 PSMG3-AS1Q96PY0 264 aa9.89□□□□□ -0.83
TCF4-250ENST00000625849 PIK3R2O00459 728 aa9.88□□□□□ -0.83
TCF4-250ENST00000625849 FBXO45P0C2W1 286 aa9.88□□□□□ -0.83
TCF4-250ENST00000625849 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
TCF4-250ENST00000625849 OSBPL3Q9H4L5 887 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms