RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
CDKL5-206ENST00000623610 RSPH9Q9H1X1 276 aaPredicted RBP10.75□□□□□ -0.69
CDKL5-206ENST00000623610 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
CDKL5-206ENST00000623610 S100BP04271 92 aaPredicted RBP10.75□□□□□ -0.69
CDKL5-206ENST00000623610 NEUROD6Q96NK8 337 aa10.75□□□□□ -0.69
CDKL5-206ENST00000623610 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
CDKL5-206ENST00000623610 FAM200BP0CF97 657 aa10.74□□□□□ -0.69
CDKL5-206ENST00000623610 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDKL5-206ENST00000623610 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
CDKL5-206ENST00000623610 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
CDKL5-206ENST00000623610 MARSP56192 900 aaKnown RBP10.73□□□□□ -0.69
CDKL5-206ENST00000623610 SH3D19Q5HYK7 790 aa10.73□□□□□ -0.69
CDKL5-206ENST00000623610 CEP63Q96MT8 703 aa10.73□□□□□ -0.69
CDKL5-206ENST00000623610 SCINQ9Y6U3 715 aa10.73□□□□□ -0.69
CDKL5-206ENST00000623610 TTLL12Q14166 644 aaPredicted RBP10.73□□□□□ -0.69
CDKL5-206ENST00000623610 DHX8Q14562 1220 aaKnown RBP10.73□□□□□ -0.69
CDKL5-206ENST00000623610 PRC1O43663 620 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 CD53P19397 219 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 TDO2P48775 406 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 TERF1P54274 439 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 MAP9Q49MG5 647 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 PMFBP1Q8TBY8 1022 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 TCEAL9Q9UHQ7 104 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 ANKRD33BA6NCL7 494 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 LRRC27Q9C0I9 530 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 ZSWIM4Q9H7M6 989 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 PRKAG2Q9UGJ0 569 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 TBC1D2BQ9UPU7 963 aa10.72□□□□□ -0.69
CDKL5-206ENST00000623610 VDRP11473 427 aa10.71□□□□□ -0.69
CDKL5-206ENST00000623610 NBPF6Q5VWK0 638 aa10.71□□□□□ -0.69
CDKL5-206ENST00000623610 NBPF5PQ86XG9 351 aaPredicted RBP10.71□□□□□ -0.69
CDKL5-206ENST00000623610 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
CDKL5-206ENST00000623610 NBPF4Q96M43 638 aa10.71□□□□□ -0.69
CDKL5-206ENST00000623610 BRINP2Q9C0B6 783 aa10.71□□□□□ -0.69
CDKL5-206ENST00000623610 IFT57Q9NWB7 429 aa10.71□□□□□ -0.69
CDKL5-206ENST00000623610 DDX56Q9NY93 547 aaKnown RBP10.71□□□□□ -0.69
CDKL5-206ENST00000623610 FANCAO15360 1455 aa10.7□□□□□ -0.7
CDKL5-206ENST00000623610 ATG7O95352 703 aa10.7□□□□□ -0.7
CDKL5-206ENST00000623610 HDLBPQ00341 1268 aaKnown RBP10.7□□□□□ -0.7
CDKL5-206ENST00000623610 TTC39BQ5VTQ0 682 aaPredicted RBP10.7□□□□□ -0.7
CDKL5-206ENST00000623610 MYO5CQ9NQX4 1742 aa10.7□□□□□ -0.7
CDKL5-206ENST00000623610 MTUS2Q5JR59 1369 aa10.7□□□□□ -0.7
CDKL5-206ENST00000623610 CALD1Q05682 793 aaKnown RBP10.7□□□□□ -0.7
CDKL5-206ENST00000623610 ENOX2Q16206 610 aaKnown RBP10.7□□□□□ -0.7
CDKL5-206ENST00000623610 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
CDKL5-206ENST00000623610 FILIP1Q7Z7B0 1213 aa10.7□□□□□ -0.7
CDKL5-206ENST00000623610 MYCBPQ99417 103 aaPredicted RBP10.7□□□□□ -0.7
CDKL5-206ENST00000623610 TMEM51Q9NW97 253 aa10.7□□□□□ -0.7
CDKL5-206ENST00000623610 NEO1Q92859 1461 aa10.69□□□□□ -0.7
CDKL5-206ENST00000623610 PLCH2O75038 1416 aa10.69□□□□□ -0.7
CDKL5-206ENST00000623610 HSP90AA2PQ14568 343 aaPredicted RBP10.69□□□□□ -0.7
CDKL5-206ENST00000623610 ZRSR2Q15696 482 aaKnown RBP10.69□□□□□ -0.7
CDKL5-206ENST00000623610 SNRNP27Q8WVK2 155 aaKnown RBP10.69□□□□□ -0.7
CDKL5-206ENST00000623610 RAPGEF3O95398 923 aa10.69□□□□□ -0.7
CDKL5-206ENST00000623610 USP5P45974 858 aa10.69□□□□□ -0.7
CDKL5-206ENST00000623610 RASSF7Q02833 373 aa10.69□□□□□ -0.7
CDKL5-206ENST00000623610 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
CDKL5-206ENST00000623610 EPAS1Q99814 870 aa10.69□□□□□ -0.7
CDKL5-206ENST00000623610 MRPL42Q9Y6G3 142 aaKnown RBP10.69□□□□□ -0.7
CDKL5-206ENST00000623610 FAM163BP0C2L3 166 aa10.68□□□□□ -0.7
CDKL5-206ENST00000623610 RAD51AP2Q09MP3 1159 aa10.68□□□□□ -0.7
CDKL5-206ENST00000623610 EFCAB2Q5VUJ9 269 aa10.68□□□□□ -0.7
CDKL5-206ENST00000623610 CDC5LQ99459 802 aaKnown RBP10.68□□□□□ -0.7
CDKL5-206ENST00000623610 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
CDKL5-206ENST00000623610 AKNAQ7Z591 1439 aa10.68□□□□□ -0.7
CDKL5-206ENST00000623610 RNF187Q5TA31 235 aaPredicted RBP10.67□□□□□ -0.7
CDKL5-206ENST00000623610 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 ABL2P42684 1182 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
CDKL5-206ENST00000623610 RPAINQ86UA6 219 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 RSPH1Q8WYR4 309 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 MPHOSPH6Q99547 160 aaKnown RBP10.67□□□□□ -0.7
CDKL5-206ENST00000623610 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 CDC42BPBQ9Y5S2 1711 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 PHLDB1Q86UU1 1377 aa10.67□□□□□ -0.7
CDKL5-206ENST00000623610 ARHGAP5Q13017 1502 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 MINK1Q8N4C8 1332 aaPredicted RBP10.66□□□□□ -0.7
CDKL5-206ENST00000623610 HSP90AA1P07900 732 aaKnown RBP10.66□□□□□ -0.7
CDKL5-206ENST00000623610 PYGBP11216 843 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 NAP1L4Q99733 375 aaKnown RBP10.66□□□□□ -0.7
CDKL5-206ENST00000623610 CFAP74Q9C0B2 1584 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 CDC42BPAQ5VT25 1732 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 LDHAP00338 332 aaKnown RBP10.66□□□□□ -0.7
CDKL5-206ENST00000623610 LDHCP07864 332 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 SGIP1Q9BQI5 828 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 BACH2Q9BYV9 841 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 MUC3BQ9H195 1237 aa10.66□□□□□ -0.7
CDKL5-206ENST00000623610 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
CDKL5-206ENST00000623610 EHBP1L1Q8N3D4 1523 aa10.65□□□□□ -0.7
CDKL5-206ENST00000623610 TIMM44O43615 452 aa10.65□□□□□ -0.7
CDKL5-206ENST00000623610 PREX2Q70Z35 1606 aa10.65□□□□□ -0.7
CDKL5-206ENST00000623610 ADGRL1O94910 1474 aa10.65□□□□□ -0.7
CDKL5-206ENST00000623610 CBFA2T2O43439 604 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms