RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 CGNQ9P2M7 1197 aaKnown RBP12.76□□□□□ -0.37
CDHR1-206ENST00000623527 CBFA2T2O43439 604 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 USP5P45974 858 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
CDHR1-206ENST00000623527 GDPD2Q9HCC8 539 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 WWC2Q6AWC2 1192 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDHR1-206ENST00000623527 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 PPFIA3O75145 1194 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 TDO2P48775 406 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 DYDC1Q8WWB3 177 aa12.76□□□□□ -0.37
CDHR1-206ENST00000623527 RBM5P52756 815 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDHR1-206ENST00000623527 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
CDHR1-206ENST00000623527 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
CDHR1-206ENST00000623527 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
CDHR1-206ENST00000623527 C16orf45Q96MC5 204 aaPredicted RBP12.75□□□□□ -0.37
CDHR1-206ENST00000623527 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
CDHR1-206ENST00000623527 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
CDHR1-206ENST00000623527 NACAP1Q9BZK3 213 aa12.74□□□□□ -0.37
CDHR1-206ENST00000623527 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDHR1-206ENST00000623527 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDHR1-206ENST00000623527 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
CDHR1-206ENST00000623527 USP25Q9UHP3 1055 aa12.74□□□□□ -0.37
CDHR1-206ENST00000623527 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
CDHR1-206ENST00000623527 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
CDHR1-206ENST00000623527 PRAM1Q96QH2 718 aa12.74□□□□□ -0.37
CDHR1-206ENST00000623527 RAI14Q9P0K7 980 aa12.74□□□□□ -0.37
CDHR1-206ENST00000623527 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
CDHR1-206ENST00000623527 EZRP15311 586 aaKnown RBP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 TAF4BQ92750 862 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 UBAC1Q9BSL1 405 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 MIA2Q96PC5 1412 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 PLEKHO1Q53GL0 409 aaPredicted RBP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 TNNT1P13805 278 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDHR1-206ENST00000623527 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
CDHR1-206ENST00000623527 SSFA2P28290 1259 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 CCT4P50991 539 aaKnown RBP12.72□□□□□ -0.37
CDHR1-206ENST00000623527 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
CDHR1-206ENST00000623527 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
CDHR1-206ENST00000623527 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 GOPCQ9HD26 462 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 RNF187Q5TA31 235 aaPredicted RBP12.72□□□□□ -0.37
CDHR1-206ENST00000623527 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
CDHR1-206ENST00000623527 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
CDHR1-206ENST00000623527 MACROD2A1Z1Q3 448 aa12.71□□□□□ -0.37
CDHR1-206ENST00000623527 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.37
CDHR1-206ENST00000623527 ISM2Q6H9L7 571 aa12.71□□□□□ -0.37
CDHR1-206ENST00000623527 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.37
CDHR1-206ENST00000623527 USP8P40818 1118 aa12.71□□□□□ -0.37
CDHR1-206ENST00000623527 BICDL1Q6ZP65 573 aa12.71□□□□□ -0.37
CDHR1-206ENST00000623527 TRMT1LQ7Z2T5 733 aaKnown RBP12.71□□□□□ -0.37
CDHR1-206ENST00000623527 CCDC97Q96F63 343 aaPredicted RBP12.71□□□□□ -0.37
CDHR1-206ENST00000623527 ZSWIM4Q9H7M6 989 aa12.71□□□□□ -0.37
CDHR1-206ENST00000623527 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
CDHR1-206ENST00000623527 BIN1O00499 593 aa12.71□□□□□ -0.38
CDHR1-206ENST00000623527 CABP4P57796 275 aa12.71□□□□□ -0.38
CDHR1-206ENST00000623527 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.38
CDHR1-206ENST00000623527 CHMP4BP1P59074 171 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 UBE4AQ14139 1066 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 BMP2KQ9NSY1 1161 aaPredicted RBP12.7□□□□□ -0.38
CDHR1-206ENST00000623527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDHR1-206ENST00000623527 SMTNL1A8MU46 457 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 PTPRGP23470 1445 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 ZNF76P36508 570 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 LRP2BPQ9P2M1 347 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 IQCEQ6IPM2 695 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
CDHR1-206ENST00000623527 BOLA2Q9H3K6 86 aa12.69□□□□□ -0.38
CDHR1-206ENST00000623527 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
CDHR1-206ENST00000623527 CASQ1P31415 396 aa12.69□□□□□ -0.38
CDHR1-206ENST00000623527 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
CDHR1-206ENST00000623527 KIF18AQ8NI77 898 aa12.69□□□□□ -0.38
CDHR1-206ENST00000623527 INCENPQ9NQS7 918 aa12.69□□□□□ -0.38
CDHR1-206ENST00000623527 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms