RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 ERCC3P19447 782 aa7.48□□□□□ -1.21
ERCC6-209ENST00000623073 MYRIPQ8NFW9 859 aa7.48□□□□□ -1.21
ERCC6-209ENST00000623073 FGFR1OPO95684 399 aaKnown RBP7.48□□□□□ -1.21
ERCC6-209ENST00000623073 XRCC6P12956 609 aaKnown RBP eCLIP7.48□□□□□ -1.21
ERCC6-209ENST00000623073 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.21
ERCC6-209ENST00000623073 STX1AQ16623 288 aa7.48□□□□□ -1.21
ERCC6-209ENST00000623073 ALDH1L2Q3SY69 923 aa7.48□□□□□ -1.21
ERCC6-209ENST00000623073 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
ERCC6-209ENST00000623073 CEP83Q9Y592 693 aa7.48□□□□□ -1.21
ERCC6-209ENST00000623073 CFAP57Q96MR6 1250 aa7.48□□□□□ -1.21
ERCC6-209ENST00000623073 CLASRPQ8N2M8 674 aaKnown RBP7.48□□□□□ -1.21
ERCC6-209ENST00000623073 NCBP3Q53F19 620 aaKnown RBP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 KANK3Q6NY19 840 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 PABPN1Q86U42 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 TAF4BQ92750 862 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 CEP131Q9UPN4 1083 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 ERICH2A1L162 156 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 ZNF500O60304 480 aaPredicted RBP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 SMC5Q8IY18 1101 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 FAM184BQ9ULE4 1060 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 IFT74Q96LB3 600 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 ALS2CR12Q96Q35 445 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 USO1O60763 962 aaKnown RBP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 ZBTB17Q13105 803 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 INTS4Q96HW7 963 aaKnown RBP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 NBPF11Q86T75 865 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 PDZRN3Q9UPQ7 1066 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 NBPF7P0C2Y1 421 aaPredicted RBP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 CEP128Q6ZU80 1094 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 PAXIP1Q6ZW49 1069 aaPredicted RBP7.47□□□□□ -1.21
ERCC6-209ENST00000623073 CTNNA3Q9UI47 895 aa7.47□□□□□ -1.21
ERCC6-209ENST00000623073 BUB1BO60566 1050 aaPredicted RBP7.46□□□□□ -1.21
ERCC6-209ENST00000623073 KIF5BP33176 963 aa7.46□□□□□ -1.21
ERCC6-209ENST00000623073 RILPL2Q969X0 211 aa7.46□□□□□ -1.21
ERCC6-209ENST00000623073 CTAGE1Q96RT6 745 aa7.46□□□□□ -1.21
ERCC6-209ENST00000623073 SNW1Q13573 536 aaKnown RBP7.46□□□□□ -1.21
ERCC6-209ENST00000623073 SEPT7Q16181 437 aaKnown RBP7.46□□□□□ -1.21
ERCC6-209ENST00000623073 ODF2Q5BJF6 829 aa7.46□□□□□ -1.21
ERCC6-209ENST00000623073 G3BP1Q13283 466 aaKnown RBP eCLIP7.46□□□□□ -1.21
ERCC6-209ENST00000623073 RBBP5Q15291 538 aaKnown RBP7.46□□□□□ -1.21
ERCC6-209ENST00000623073 ATF7IPQ6VMQ6 1270 aa7.46□□□□□ -1.21
ERCC6-209ENST00000623073 EHBP1L1Q8N3D4 1523 aa7.46□□□□□ -1.21
ERCC6-209ENST00000623073 VGFO15240 615 aaPredicted RBP7.46□□□□□ -1.22
ERCC6-209ENST00000623073 LUC7L3O95232 432 aaKnown RBP7.46□□□□□ -1.22
ERCC6-209ENST00000623073 RAD50Q92878 1312 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 APAF1O14727 1248 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 BMP15O95972 392 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 NPHP3Q7Z494 1330 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 CBX1P83916 185 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 TRIM22Q8IYM9 498 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 IQCDQ96DY2 449 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 STAMBPO95630 424 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 GTF2F1P35269 517 aaKnown RBP eCLIP7.46□□□□□ -1.22
ERCC6-209ENST00000623073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.46□□□□□ -1.22
ERCC6-209ENST00000623073 LUC7L2Q9Y383 392 aaKnown RBP7.46□□□□□ -1.22
ERCC6-209ENST00000623073 NSD2O96028 1365 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 CLUL1Q15846 466 aa7.46□□□□□ -1.22
ERCC6-209ENST00000623073 IFI16Q16666 785 aaKnown RBP7.46□□□□□ -1.22
ERCC6-209ENST00000623073 FIBPO43427 364 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 CLIP2Q9UDT6 1046 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 CEP135Q66GS9 1140 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 ZSCAN16Q9H4T2 348 aaPredicted RBP7.45□□□□□ -1.22
ERCC6-209ENST00000623073 ANKRD30BQ9BXX2 1392 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 ZFYP08048 801 aaPredicted RBP7.45□□□□□ -1.22
ERCC6-209ENST00000623073 EPS15P42566 896 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 CEP120Q8N960 986 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 MRVI1Q9Y6F6 885 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 RPGRIP1LQ68CZ1 1315 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 ERICH4A6NGS2 130 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
ERCC6-209ENST00000623073 SLC8A1P32418 973 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 SPC24Q8NBT2 197 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 PIBF1Q8WXW3 757 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 TRIM34Q9BYJ4 488 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 MAP2K2P36507 400 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 PRPHP41219 470 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
ERCC6-209ENST00000623073 CASQ1P31415 396 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 HSP90AB2PQ58FF8 381 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 PLVAPQ9BX97 442 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 FOXD4L1Q9NU39 408 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 ARMC9Q7Z3E5 817 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 PDILTQ8N807 584 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 AQRO60306 1485 aaKnown RBP eCLIP7.45□□□□□ -1.22
ERCC6-209ENST00000623073 CHD1LQ86WJ1 897 aa7.45□□□□□ -1.22
ERCC6-209ENST00000623073 TNPO1Q92973 898 aaKnown RBP7.45□□□□□ -1.22
ERCC6-209ENST00000623073 HDXQ7Z353 690 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 CCDC196A0A1B0GTZ2 297 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 ZNF445P59923 1031 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 MAP2K1Q02750 393 aaPredicted RBP7.44□□□□□ -1.22
ERCC6-209ENST00000623073 SPA17Q15506 151 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 IL16Q14005 1332 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 SYCE3A1L190 88 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 LARP1BQ659C4 914 aaKnown RBP7.44□□□□□ -1.22
ERCC6-209ENST00000623073 LMNTD2Q8IXW0 634 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 GOLGA1Q92805 767 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 MARCH6O60337 910 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 LMAN1P49257 510 aa7.44□□□□□ -1.22
ERCC6-209ENST00000623073 VCXQ9H320 206 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms