RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MTHFSDQ2M296 383 aaKnown RBP20.84■□□□□ 0.93
LDB3-208ENST00000623007 RWDD1Q9H446 243 aaPredicted RBP20.83■□□□□ 0.93
LDB3-208ENST00000623007 NOB1Q9ULX3 412 aaKnown RBP20.83■□□□□ 0.93
LDB3-208ENST00000623007 CRB1P82279 1406 aa20.83■□□□□ 0.92
LDB3-208ENST00000623007 NCAPD2Q15021 1401 aa20.83■□□□□ 0.92
LDB3-208ENST00000623007 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.92
LDB3-208ENST00000623007 API5Q9BZZ5 524 aaKnown RBP20.83■□□□□ 0.92
LDB3-208ENST00000623007 LRRC37A3O60309 1634 aa20.83■□□□□ 0.92
LDB3-208ENST00000623007 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
LDB3-208ENST00000623007 HSPA2P54652 639 aa20.82■□□□□ 0.92
LDB3-208ENST00000623007 FAM83GA6ND36 823 aa20.81■□□□□ 0.92
LDB3-208ENST00000623007 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
LDB3-208ENST00000623007 MRPL50Q8N5N7 158 aaKnown RBP20.8■□□□□ 0.92
LDB3-208ENST00000623007 TNS3Q68CZ2 1445 aa20.8■□□□□ 0.92
LDB3-208ENST00000623007 CAMTA1Q9Y6Y1 1673 aa20.8■□□□□ 0.92
LDB3-208ENST00000623007 RLBP1P12271 317 aa20.79■□□□□ 0.92
LDB3-208ENST00000623007 LMOD2Q6P5Q4 547 aa20.78■□□□□ 0.92
LDB3-208ENST00000623007 MCM10Q7L590 875 aa20.78■□□□□ 0.92
LDB3-208ENST00000623007 MED1Q15648 1581 aaPredicted RBP20.78■□□□□ 0.92
LDB3-208ENST00000623007 DCTN1Q14203 1278 aa20.77■□□□□ 0.92
LDB3-208ENST00000623007 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.92
LDB3-208ENST00000623007 ITPRIPQ8IWB1 547 aa20.77■□□□□ 0.92
LDB3-208ENST00000623007 OVOS2A0A0G2JMS6 1433 aa20.77■□□□□ 0.92
LDB3-208ENST00000623007 FAM208AQ9UK61 1670 aaKnown RBP20.77■□□□□ 0.92
LDB3-208ENST00000623007 XIRP1Q702N8 1843 aaKnown RBP20.77■□□□□ 0.91
LDB3-208ENST00000623007 PTPRCP08575 1304 aa20.77■□□□□ 0.91
LDB3-208ENST00000623007 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
LDB3-208ENST00000623007 TSPYL4Q9UJ04 414 aa20.76■□□□□ 0.91
LDB3-208ENST00000623007 C8orf58Q8NAV2 365 aa20.75■□□□□ 0.91
LDB3-208ENST00000623007 PXDNQ92626 1479 aa20.75■□□□□ 0.91
LDB3-208ENST00000623007 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
LDB3-208ENST00000623007 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
LDB3-208ENST00000623007 ABCC4O15439 1325 aa20.74■□□□□ 0.91
LDB3-208ENST00000623007 TAF7Q15545 349 aaPredicted RBP20.73■□□□□ 0.91
LDB3-208ENST00000623007 SPATA31A3Q5VYP0 1347 aa20.73■□□□□ 0.91
LDB3-208ENST00000623007 XPCQ01831 940 aaPredicted RBP20.73■□□□□ 0.91
LDB3-208ENST00000623007 AKAP4Q5JQC9 854 aa20.73■□□□□ 0.91
LDB3-208ENST00000623007 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
LDB3-208ENST00000623007 ANKRD24Q8TF21 1146 aa20.73■□□□□ 0.91
LDB3-208ENST00000623007 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
LDB3-208ENST00000623007 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
LDB3-208ENST00000623007 CPDO75976 1380 aa20.72■□□□□ 0.91
LDB3-208ENST00000623007 TMEM57Q8N5G2 664 aa20.72■□□□□ 0.91
LDB3-208ENST00000623007 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
LDB3-208ENST00000623007 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
LDB3-208ENST00000623007 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
LDB3-208ENST00000623007 ERBB3P21860 1342 aa20.7■□□□□ 0.9
LDB3-208ENST00000623007 IGHDP01880 384 aa20.7■□□□□ 0.9
LDB3-208ENST00000623007 HOXB7P09629 217 aa20.69■□□□□ 0.9
LDB3-208ENST00000623007 PDE4AP27815 886 aa20.69■□□□□ 0.9
LDB3-208ENST00000623007 C1orf141Q5JVX7 400 aa20.69■□□□□ 0.9
LDB3-208ENST00000623007 BACH2Q9BYV9 841 aa20.69■□□□□ 0.9
LDB3-208ENST00000623007 PCDHB15Q9Y5E8 787 aa20.69■□□□□ 0.9
LDB3-208ENST00000623007 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
LDB3-208ENST00000623007 ELL2O00472 640 aaPredicted RBP20.68■□□□□ 0.9
LDB3-208ENST00000623007 STK31Q9BXU1 1019 aa20.68■□□□□ 0.9
LDB3-208ENST00000623007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.68■□□□□ 0.9
LDB3-208ENST00000623007 CCDC30Q5VVM6 783 aa20.67■□□□□ 0.9
LDB3-208ENST00000623007 BRINP3Q76B58 766 aa20.67■□□□□ 0.9
LDB3-208ENST00000623007 SLAIN2Q9P270 581 aa20.67■□□□□ 0.9
LDB3-208ENST00000623007 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
LDB3-208ENST00000623007 CRYBG1Q9Y4K1 1723 aa20.67■□□□□ 0.9
LDB3-208ENST00000623007 ANP32AP39687 249 aaKnown RBP20.67■□□□□ 0.9
LDB3-208ENST00000623007 SOS2Q07890 1332 aaPredicted RBP20.66■□□□□ 0.9
LDB3-208ENST00000623007 FAM161AQ3B820 660 aa20.66■□□□□ 0.9
LDB3-208ENST00000623007 INTS3Q68E01 1043 aaKnown RBP20.66■□□□□ 0.9
LDB3-208ENST00000623007 IL17REQ8NFR9 667 aa20.66■□□□□ 0.9
LDB3-208ENST00000623007 RGPD2P0DJD1 1756 aa20.65■□□□□ 0.9
LDB3-208ENST00000623007 COL18A1P39060 1754 aa20.65■□□□□ 0.9
LDB3-208ENST00000623007 ZBTB7BO15156 539 aaPredicted RBP20.64■□□□□ 0.9
LDB3-208ENST00000623007 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.9
LDB3-208ENST00000623007 TEFQ10587 303 aa20.64■□□□□ 0.89
LDB3-208ENST00000623007 USHBP1Q8N6Y0 703 aa20.64■□□□□ 0.89
LDB3-208ENST00000623007 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
LDB3-208ENST00000623007 ZNF335Q9H4Z2 1342 aaPredicted RBP20.63■□□□□ 0.89
LDB3-208ENST00000623007 SMC5Q8IY18 1101 aa20.62■□□□□ 0.89
LDB3-208ENST00000623007 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
LDB3-208ENST00000623007 SPG7Q9UQ90 795 aa20.62■□□□□ 0.89
LDB3-208ENST00000623007 ZC3H6P61129 1189 aaKnown RBP20.61■□□□□ 0.89
LDB3-208ENST00000623007 LRRC59Q96AG4 307 aaKnown RBP20.61■□□□□ 0.89
LDB3-208ENST00000623007 SLC4A2P04920 1241 aa20.61■□□□□ 0.89
LDB3-208ENST00000623007 TATP17735 454 aaPredicted RBP20.61■□□□□ 0.89
LDB3-208ENST00000623007 CCT4P50991 539 aaKnown RBP20.61■□□□□ 0.89
LDB3-208ENST00000623007 ADAMTS7Q9UKP4 1686 aa20.6■□□□□ 0.89
LDB3-208ENST00000623007 KDM3BQ7LBC6 1761 aa20.6■□□□□ 0.89
LDB3-208ENST00000623007 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
LDB3-208ENST00000623007 AXIN2Q9Y2T1 843 aa20.6■□□□□ 0.89
LDB3-208ENST00000623007 NHSL1Q5SYE7 1610 aa20.59■□□□□ 0.89
LDB3-208ENST00000623007 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.89
LDB3-208ENST00000623007 RGS3P49796 1198 aa20.58■□□□□ 0.89
LDB3-208ENST00000623007 FBXO41Q8TF61 875 aa20.58■□□□□ 0.89
LDB3-208ENST00000623007 PXDNLA1KZ92 1463 aa20.58■□□□□ 0.88
LDB3-208ENST00000623007 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
LDB3-208ENST00000623007 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
LDB3-208ENST00000623007 NLRP2Q9NX02 1062 aa20.57■□□□□ 0.88
LDB3-208ENST00000623007 PDZRN3Q9UPQ7 1066 aa20.57■□□□□ 0.88
LDB3-208ENST00000623007 RGS12O14924 1447 aa20.56■□□□□ 0.88
LDB3-208ENST00000623007 RPAP2Q8IXW5 612 aaPredicted RBP20.56■□□□□ 0.88
LDB3-208ENST00000623007 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
LDB3-208ENST00000623007 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms