RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 CELA2BP08218 269 aaPredicted RBP9.41□□□□□ -0.9
RNU6-538P-201ENST00000622329 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
RNU6-538P-201ENST00000622329 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
RNU6-538P-201ENST00000622329 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.9
RNU6-538P-201ENST00000622329 TRIM34Q9BYJ4 488 aa9.4□□□□□ -0.9
RNU6-538P-201ENST00000622329 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
RNU6-538P-201ENST00000622329 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
RNU6-538P-201ENST00000622329 LYSMD3Q7Z3D4 306 aa9.39□□□□□ -0.91
RNU6-538P-201ENST00000622329 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
RNU6-538P-201ENST00000622329 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
RNU6-538P-201ENST00000622329 RHOQP17081 205 aa9.38□□□□□ -0.91
RNU6-538P-201ENST00000622329 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
RNU6-538P-201ENST00000622329 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
RNU6-538P-201ENST00000622329 DBN1Q16643 649 aa9.36□□□□□ -0.91
RNU6-538P-201ENST00000622329 PRICKLE2Q7Z3G6 844 aa9.36□□□□□ -0.91
RNU6-538P-201ENST00000622329 DZIP3Q86Y13 1208 aaKnown RBP9.36□□□□□ -0.91
RNU6-538P-201ENST00000622329 GPR25O00155 361 aa9.35□□□□□ -0.91
RNU6-538P-201ENST00000622329 MARSP56192 900 aaKnown RBP9.35□□□□□ -0.91
RNU6-538P-201ENST00000622329 IGHA1P01876 353 aa9.34□□□□□ -0.91
RNU6-538P-201ENST00000622329 TRIM22Q8IYM9 498 aa9.34□□□□□ -0.91
RNU6-538P-201ENST00000622329 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
RNU6-538P-201ENST00000622329 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
RNU6-538P-201ENST00000622329 RFC5P40937 340 aa9.33□□□□□ -0.92
RNU6-538P-201ENST00000622329 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
RNU6-538P-201ENST00000622329 GIGYF1O75420 1035 aaPredicted RBP9.32□□□□□ -0.92
RNU6-538P-201ENST00000622329 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
RNU6-538P-201ENST00000622329 IGF1RP08069 1367 aa9.32□□□□□ -0.92
RNU6-538P-201ENST00000622329 THBS1P07996 1170 aa9.31□□□□□ -0.92
RNU6-538P-201ENST00000622329 FOXK2Q01167 660 aa9.31□□□□□ -0.92
RNU6-538P-201ENST00000622329 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
RNU6-538P-201ENST00000622329 ACDQ96AP0 544 aa9.31□□□□□ -0.92
RNU6-538P-201ENST00000622329 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
RNU6-538P-201ENST00000622329 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
RNU6-538P-201ENST00000622329 ATP5J2-PTCD1G3V325 749 aa9.3□□□□□ -0.92
RNU6-538P-201ENST00000622329 GPC1P35052 558 aa9.3□□□□□ -0.92
RNU6-538P-201ENST00000622329 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
RNU6-538P-201ENST00000622329 DCAF5Q96JK2 942 aa9.3□□□□□ -0.92
RNU6-538P-201ENST00000622329 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
RNU6-538P-201ENST00000622329 FBXO45P0C2W1 286 aa9.29□□□□□ -0.92
RNU6-538P-201ENST00000622329 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
RNU6-538P-201ENST00000622329 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
RNU6-538P-201ENST00000622329 GPR37L1O60883 481 aa9.28□□□□□ -0.92
RNU6-538P-201ENST00000622329 PROCP04070 461 aa9.28□□□□□ -0.92
RNU6-538P-201ENST00000622329 SCTRP47872 440 aa9.28□□□□□ -0.92
RNU6-538P-201ENST00000622329 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
RNU6-538P-201ENST00000622329 GRIP2Q9C0E4 1043 aa9.28□□□□□ -0.92
RNU6-538P-201ENST00000622329 DYRK1BQ9Y463 629 aa9.28□□□□□ -0.92
RNU6-538P-201ENST00000622329 POU4F2Q12837 409 aa9.27□□□□□ -0.93
RNU6-538P-201ENST00000622329 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
RNU6-538P-201ENST00000622329 MEN1O00255 615 aa9.26□□□□□ -0.93
RNU6-538P-201ENST00000622329 SUPT5HO00267 1087 aaKnown RBP9.26□□□□□ -0.93
RNU6-538P-201ENST00000622329 BCRP11274 1271 aa9.26□□□□□ -0.93
RNU6-538P-201ENST00000622329 SPOCK3Q9BQ16 436 aa9.26□□□□□ -0.93
RNU6-538P-201ENST00000622329 ZBBXA8MT70 800 aa9.25□□□□□ -0.93
RNU6-538P-201ENST00000622329 RIPOR1Q6ZS17 1223 aa9.25□□□□□ -0.93
RNU6-538P-201ENST00000622329 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
RNU6-538P-201ENST00000622329 TRAK2O60296 914 aa9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 ADAM23O75077 832 aa9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 OSBPL3Q9H4L5 887 aa9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
RNU6-538P-201ENST00000622329 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
RNU6-538P-201ENST00000622329 CLN3Q13286 438 aa9.23□□□□□ -0.93
RNU6-538P-201ENST00000622329 XP32Q5T750 250 aa9.22□□□□□ -0.93
RNU6-538P-201ENST00000622329 C1orf229Q6ZS94 237 aaPredicted RBP9.22□□□□□ -0.93
RNU6-538P-201ENST00000622329 GAS2L1Q99501 681 aaPredicted RBP9.22□□□□□ -0.93
RNU6-538P-201ENST00000622329 ENAMQ9NRM1 1142 aa9.22□□□□□ -0.93
RNU6-538P-201ENST00000622329 MSTNO14793 375 aa9.21□□□□□ -0.94
RNU6-538P-201ENST00000622329 SNRPNP63162 240 aaKnown RBP9.21□□□□□ -0.94
RNU6-538P-201ENST00000622329 UBAP2LQ14157 1087 aaKnown RBP9.21□□□□□ -0.94
RNU6-538P-201ENST00000622329 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.94
RNU6-538P-201ENST00000622329 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
RNU6-538P-201ENST00000622329 HRH3Q9Y5N1 445 aa9.2□□□□□ -0.94
RNU6-538P-201ENST00000622329 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
RNU6-538P-201ENST00000622329 SHISA8B8ZZ34 492 aa9.19□□□□□ -0.94
RNU6-538P-201ENST00000622329 OIP5O43482 229 aa9.19□□□□□ -0.94
RNU6-538P-201ENST00000622329 BEND7Q8N7W2 519 aaPredicted RBP9.19□□□□□ -0.94
RNU6-538P-201ENST00000622329 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
RNU6-538P-201ENST00000622329 GOPCQ9HD26 462 aa9.19□□□□□ -0.94
RNU6-538P-201ENST00000622329 H7C1W4 665 aa9.18□□□□□ -0.94
RNU6-538P-201ENST00000622329 WDR44Q5JSH3 913 aa9.18□□□□□ -0.94
RNU6-538P-201ENST00000622329 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
RNU6-538P-201ENST00000622329 FOXR1Q6PIV2 292 aa9.18□□□□□ -0.94
RNU6-538P-201ENST00000622329 NEDD1Q8NHV4 660 aa9.18□□□□□ -0.94
RNU6-538P-201ENST00000622329 WASLO00401 505 aaPredicted RBP9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 IL2RAP01589 272 aa9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 MX2P20592 715 aa9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
RNU6-538P-201ENST00000622329 KRBA1A5PL33 1030 aa9.16□□□□□ -0.94
RNU6-538P-201ENST00000622329 F11P03951 625 aa9.16□□□□□ -0.94
RNU6-538P-201ENST00000622329 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
RNU6-538P-201ENST00000622329 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
RNU6-538P-201ENST00000622329 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
RNU6-538P-201ENST00000622329 RAB6BQ9NRW1 208 aa9.16□□□□□ -0.94
RNU6-538P-201ENST00000622329 COL8A1P27658 744 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms