RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 PSEN1P49768 467 aa9.69□□□□□ -0.86
PDE4D-227ENST00000621323 PRELPP51888 382 aa9.69□□□□□ -0.86
PDE4D-227ENST00000621323 NLGN2Q8NFZ4 835 aa9.69□□□□□ -0.86
PDE4D-227ENST00000621323 GPRASP1Q5JY77 1395 aa9.68□□□□□ -0.86
PDE4D-227ENST00000621323 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
PDE4D-227ENST00000621323 ZC3H6P61129 1189 aaKnown RBP9.68□□□□□ -0.86
PDE4D-227ENST00000621323 TXNRD1Q16881 649 aa9.68□□□□□ -0.86
PDE4D-227ENST00000621323 DNAJC5GQ8N7S2 189 aa9.68□□□□□ -0.86
PDE4D-227ENST00000621323 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
PDE4D-227ENST00000621323 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
PDE4D-227ENST00000621323 BCL9O00512 1426 aa9.67□□□□□ -0.86
PDE4D-227ENST00000621323 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
PDE4D-227ENST00000621323 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
PDE4D-227ENST00000621323 COL5A2P05997 1499 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-227ENST00000621323 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-227ENST00000621323 SAFB2Q14151 953 aaKnown RBP eCLIP9.66□□□□□ -0.86
PDE4D-227ENST00000621323 GPBP1L1Q9HC44 474 aaPredicted RBP9.66□□□□□ -0.86
PDE4D-227ENST00000621323 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
PDE4D-227ENST00000621323 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.86
PDE4D-227ENST00000621323 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.86
PDE4D-227ENST00000621323 C7P10643 843 aa9.65□□□□□ -0.86
PDE4D-227ENST00000621323 ZNF827Q17R98 1081 aa9.65□□□□□ -0.86
PDE4D-227ENST00000621323 PRAM1Q96QH2 718 aa9.65□□□□□ -0.86
PDE4D-227ENST00000621323 TULP4Q9NRJ4 1543 aa9.65□□□□□ -0.86
PDE4D-227ENST00000621323 CPDO75976 1380 aa9.64□□□□□ -0.87
PDE4D-227ENST00000621323 KIF3CO14782 793 aa9.64□□□□□ -0.87
PDE4D-227ENST00000621323 EVA1CP58658 441 aa9.64□□□□□ -0.87
PDE4D-227ENST00000621323 ASTLQ6HA08 431 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-227ENST00000621323 MARCH10Q8NA82 808 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-227ENST00000621323 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
PDE4D-227ENST00000621323 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
PDE4D-227ENST00000621323 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
PDE4D-227ENST00000621323 TOPAZ1Q8N9V7 1692 aa9.63□□□□□ -0.87
PDE4D-227ENST00000621323 CRB1P82279 1406 aa9.63□□□□□ -0.87
PDE4D-227ENST00000621323 APLP1P51693 650 aa9.62□□□□□ -0.87
PDE4D-227ENST00000621323 MMRN1Q13201 1228 aa9.62□□□□□ -0.87
PDE4D-227ENST00000621323 TNS4Q8IZW8 715 aa9.62□□□□□ -0.87
PDE4D-227ENST00000621323 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
PDE4D-227ENST00000621323 ANKRD30BQ9BXX2 1392 aa9.62□□□□□ -0.87
PDE4D-227ENST00000621323 USP19O94966 1318 aa9.61□□□□□ -0.87
PDE4D-227ENST00000621323 GRIN3BO60391 1043 aa9.61□□□□□ -0.87
PDE4D-227ENST00000621323 DDB1Q16531 1140 aa9.61□□□□□ -0.87
PDE4D-227ENST00000621323 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
PDE4D-227ENST00000621323 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
PDE4D-227ENST00000621323 C14orf93Q9H972 538 aaKnown RBP9.6□□□□□ -0.87
PDE4D-227ENST00000621323 CABP2Q9NPB3 220 aa9.6□□□□□ -0.87
PDE4D-227ENST00000621323 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
PDE4D-227ENST00000621323 GOLGA2Q08379 1002 aa9.59□□□□□ -0.87
PDE4D-227ENST00000621323 JMYQ8N9B5 988 aa9.59□□□□□ -0.87
PDE4D-227ENST00000621323 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
PDE4D-227ENST00000621323 MS4A3Q96HJ5 214 aa9.59□□□□□ -0.87
PDE4D-227ENST00000621323 NHSQ6T4R5 1651 aa9.58□□□□□ -0.88
PDE4D-227ENST00000621323 TULP1O00294 542 aaPredicted RBP9.58□□□□□ -0.88
PDE4D-227ENST00000621323 RGL3Q3MIN7 710 aa9.58□□□□□ -0.88
PDE4D-227ENST00000621323 LRRC4BQ9NT99 713 aa9.58□□□□□ -0.88
PDE4D-227ENST00000621323 EIF3AQ14152 1382 aaKnown RBP9.58□□□□□ -0.88
PDE4D-227ENST00000621323 ADGRB1O14514 1584 aa9.58□□□□□ -0.88
PDE4D-227ENST00000621323 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
PDE4D-227ENST00000621323 PNPLA7Q6ZV29 1317 aa9.57□□□□□ -0.88
PDE4D-227ENST00000621323 ITGAEP38570 1179 aa9.57□□□□□ -0.88
PDE4D-227ENST00000621323 HTRA3P83110 453 aa9.57□□□□□ -0.88
PDE4D-227ENST00000621323 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
PDE4D-227ENST00000621323 IFNL1Q8IU54 200 aa9.57□□□□□ -0.88
PDE4D-227ENST00000621323 MINK1Q8N4C8 1332 aaPredicted RBP9.56□□□□□ -0.88
PDE4D-227ENST00000621323 QSER1Q2KHR3 1735 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 WDR90Q96KV7 1748 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
PDE4D-227ENST00000621323 MAP3K13O43283 966 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 POLD1P28340 1107 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 NLRP6P59044 892 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
PDE4D-227ENST00000621323 POLR3AO14802 1390 aaPredicted RBP9.55□□□□□ -0.88
PDE4D-227ENST00000621323 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
PDE4D-227ENST00000621323 SLC16A10Q8TF71 515 aa9.55□□□□□ -0.88
PDE4D-227ENST00000621323 MFRPQ9BY79 579 aa9.55□□□□□ -0.88
PDE4D-227ENST00000621323 POGKQ9P215 609 aa9.55□□□□□ -0.88
PDE4D-227ENST00000621323 GCP02774 474 aa9.54□□□□□ -0.88
PDE4D-227ENST00000621323 SPNS2Q8IVW8 549 aa9.54□□□□□ -0.88
PDE4D-227ENST00000621323 TNS2Q63HR2 1409 aa9.54□□□□□ -0.88
PDE4D-227ENST00000621323 COL18A1P39060 1754 aa9.53□□□□□ -0.88
PDE4D-227ENST00000621323 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
PDE4D-227ENST00000621323 BRD4O60885 1362 aaPredicted RBP9.52□□□□□ -0.88
PDE4D-227ENST00000621323 BTAF1O14981 1849 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 TOM1L2Q6ZVM7 507 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
PDE4D-227ENST00000621323 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 KIF12Q96FN5 646 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 ACSBG1Q96GR2 724 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 WWC3Q9ULE0 1092 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 TRPM1Q7Z4N2 1603 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 WDR17Q8IZU2 1322 aa9.52□□□□□ -0.89
PDE4D-227ENST00000621323 SLIT3O75094 1523 aa9.51□□□□□ -0.89
PDE4D-227ENST00000621323 ABCC6O95255 1503 aa9.51□□□□□ -0.89
PDE4D-227ENST00000621323 USP6P35125 1406 aa9.51□□□□□ -0.89
PDE4D-227ENST00000621323 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
PDE4D-227ENST00000621323 TOMM70O94826 608 aa9.51□□□□□ -0.89
PDE4D-227ENST00000621323 ATN1P54259 1190 aaPredicted RBP9.51□□□□□ -0.89
PDE4D-227ENST00000621323 NUDT16Q96DE0 195 aaKnown RBP9.51□□□□□ -0.89
PDE4D-227ENST00000621323 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms