RNA–Protein interactions for RNA: ENST00000620613.1

IGKV2-40-201, Transcript of immunoglobulin kappa variable 2-40, humanhuman

APPRIS P5

Gene IGKV2-40, Length 314 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-40-201ENST00000620613 NBPF6Q5VWK0 638 aa13.98□□□□□ -0.17
IGKV2-40-201ENST00000620613 NBPF4Q96M43 638 aa13.98□□□□□ -0.17
IGKV2-40-201ENST00000620613 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
IGKV2-40-201ENST00000620613 FYB1O15117 783 aa13.97□□□□□ -0.17
IGKV2-40-201ENST00000620613 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
IGKV2-40-201ENST00000620613 C1QTNF8P60827 252 aa13.97□□□□□ -0.17
IGKV2-40-201ENST00000620613 RAPGEF4Q8WZA2 1011 aa13.97□□□□□ -0.17
IGKV2-40-201ENST00000620613 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
IGKV2-40-201ENST00000620613 PELP1Q8IZL8 1130 aaKnown RBP13.96□□□□□ -0.17
IGKV2-40-201ENST00000620613 BTAF1O14981 1849 aa13.96□□□□□ -0.17
IGKV2-40-201ENST00000620613 NSD2O96028 1365 aa13.96□□□□□ -0.18
IGKV2-40-201ENST00000620613 MSH5O43196 834 aa13.95□□□□□ -0.18
IGKV2-40-201ENST00000620613 TMF1P82094 1093 aa13.95□□□□□ -0.18
IGKV2-40-201ENST00000620613 LTN1O94822 1766 aa13.95□□□□□ -0.18
IGKV2-40-201ENST00000620613 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
IGKV2-40-201ENST00000620613 USP47Q96K76 1375 aa13.95□□□□□ -0.18
IGKV2-40-201ENST00000620613 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
IGKV2-40-201ENST00000620613 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
IGKV2-40-201ENST00000620613 COL23A1Q86Y22 540 aaPredicted RBP13.94□□□□□ -0.18
IGKV2-40-201ENST00000620613 NLGN2Q8NFZ4 835 aa13.94□□□□□ -0.18
IGKV2-40-201ENST00000620613 GGNBP2Q9H3C7 697 aa13.94□□□□□ -0.18
IGKV2-40-201ENST00000620613 SENP3-EIF4A1A0A087X0R7 540 aa13.93□□□□□ -0.18
IGKV2-40-201ENST00000620613 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
IGKV2-40-201ENST00000620613 MEGF6O75095 1541 aa13.93□□□□□ -0.18
IGKV2-40-201ENST00000620613 SMG6Q86US8 1419 aaKnown RBP13.92□□□□□ -0.18
IGKV2-40-201ENST00000620613 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
IGKV2-40-201ENST00000620613 HSP90AB2PQ58FF8 381 aa13.92□□□□□ -0.18
IGKV2-40-201ENST00000620613 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
IGKV2-40-201ENST00000620613 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
IGKV2-40-201ENST00000620613 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.18
IGKV2-40-201ENST00000620613 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.18
IGKV2-40-201ENST00000620613 GIGYF1O75420 1035 aaPredicted RBP13.9□□□□□ -0.18
IGKV2-40-201ENST00000620613 MPRIPQ6WCQ1 1025 aa13.9□□□□□ -0.18
IGKV2-40-201ENST00000620613 INSRP06213 1382 aa13.9□□□□□ -0.18
IGKV2-40-201ENST00000620613 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 KIF24Q5T7B8 1368 aa13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 YBX3P16989 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
IGKV2-40-201ENST00000620613 FLT4P35916 1363 aa13.87□□□□□ -0.19
IGKV2-40-201ENST00000620613 PALLDQ8WX93 1383 aa13.87□□□□□ -0.19
IGKV2-40-201ENST00000620613 CYP27B1O15528 508 aa13.87□□□□□ -0.19
IGKV2-40-201ENST00000620613 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
IGKV2-40-201ENST00000620613 QSER1Q2KHR3 1735 aa13.85□□□□□ -0.19
IGKV2-40-201ENST00000620613 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
IGKV2-40-201ENST00000620613 PIGBQ92521 554 aa13.85□□□□□ -0.19
IGKV2-40-201ENST00000620613 AK7Q96M32 723 aa13.85□□□□□ -0.19
IGKV2-40-201ENST00000620613 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
IGKV2-40-201ENST00000620613 CHD4Q14839 1912 aa13.84□□□□□ -0.19
IGKV2-40-201ENST00000620613 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
IGKV2-40-201ENST00000620613 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
IGKV2-40-201ENST00000620613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
IGKV2-40-201ENST00000620613 LY75O60449 1722 aa13.83□□□□□ -0.2
IGKV2-40-201ENST00000620613 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
IGKV2-40-201ENST00000620613 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.2
IGKV2-40-201ENST00000620613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
IGKV2-40-201ENST00000620613 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
IGKV2-40-201ENST00000620613 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
IGKV2-40-201ENST00000620613 PHF14O94880 888 aa13.81□□□□□ -0.2
IGKV2-40-201ENST00000620613 SSFA2P28290 1259 aa13.81□□□□□ -0.2
IGKV2-40-201ENST00000620613 SIK1P57059 783 aa13.81□□□□□ -0.2
IGKV2-40-201ENST00000620613 AMIGO3Q86WK7 504 aa13.81□□□□□ -0.2
IGKV2-40-201ENST00000620613 EYA1Q99502 592 aa13.8□□□□□ -0.2
IGKV2-40-201ENST00000620613 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
IGKV2-40-201ENST00000620613 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
IGKV2-40-201ENST00000620613 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
IGKV2-40-201ENST00000620613 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
IGKV2-40-201ENST00000620613 SMIM5Q71RC9 77 aa13.79□□□□□ -0.2
IGKV2-40-201ENST00000620613 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
IGKV2-40-201ENST00000620613 GPBP1L1Q9HC44 474 aaPredicted RBP13.79□□□□□ -0.2
IGKV2-40-201ENST00000620613 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
IGKV2-40-201ENST00000620613 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
IGKV2-40-201ENST00000620613 ASAP1Q9ULH1 1129 aa13.78□□□□□ -0.2
IGKV2-40-201ENST00000620613 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
IGKV2-40-201ENST00000620613 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
IGKV2-40-201ENST00000620613 GNPATO15228 680 aa13.77□□□□□ -0.21
IGKV2-40-201ENST00000620613 PHKG2P15735 406 aa13.77□□□□□ -0.21
IGKV2-40-201ENST00000620613 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
IGKV2-40-201ENST00000620613 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
IGKV2-40-201ENST00000620613 IGSF1Q8N6C5 1336 aa13.77□□□□□ -0.21
IGKV2-40-201ENST00000620613 TUBGCP6Q96RT7 1819 aa13.77□□□□□ -0.21
IGKV2-40-201ENST00000620613 ITPK1Q13572 414 aa13.76□□□□□ -0.21
IGKV2-40-201ENST00000620613 ATG3Q9NT62 314 aa13.76□□□□□ -0.21
IGKV2-40-201ENST00000620613 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
IGKV2-40-201ENST00000620613 CEP350Q5VT06 3117 aa13.75□□□□□ -0.21
IGKV2-40-201ENST00000620613 ERVV-2B6SEH9 535 aa13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 MMP10P09238 476 aa13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 EIF4A2Q14240 407 aaKnown RBP13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 TRAPPC3LQ5T215 181 aa13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 C5P01031 1676 aa13.74□□□□□ -0.21
IGKV2-40-201ENST00000620613 C4BP0C0L5 1744 aa13.73□□□□□ -0.21
IGKV2-40-201ENST00000620613 ADCY9O60503 1353 aa13.73□□□□□ -0.21
IGKV2-40-201ENST00000620613 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
IGKV2-40-201ENST00000620613 TNNT2P45379 298 aaPredicted RBP13.73□□□□□ -0.21
IGKV2-40-201ENST00000620613 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
IGKV2-40-201ENST00000620613 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms