RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 ANKS4BQ8N8V4 417 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 LRRFIP2Q9Y608 721 aaKnown RBP4.92□□□□□ -1.62
DMD-230ENST00000620040 MSL1Q68DK7 614 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 NFXL1Q6ZNB6 911 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 CCDC50Q8IVM0 306 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 EHBP1Q8NDI1 1231 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 NAA15Q9BXJ9 866 aaKnown RBP4.92□□□□□ -1.62
DMD-230ENST00000620040 PKD2Q13563 968 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 STK38Q15208 465 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 DNAJC21Q5F1R6 531 aaKnown RBP4.92□□□□□ -1.62
DMD-230ENST00000620040 SRRTQ9BXP5 876 aaKnown RBP4.92□□□□□ -1.62
DMD-230ENST00000620040 UPF3BQ9BZI7 483 aaKnown RBP4.92□□□□□ -1.62
DMD-230ENST00000620040 ZFYVE27Q5T4F4 411 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 CCDC183Q5T5S1 534 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 MPHOSPH9Q99550 1183 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 PLIN1O60240 522 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 CEP83Q9Y592 693 aa4.92□□□□□ -1.62
DMD-230ENST00000620040 EIF2AK4Q9P2K8 1649 aaKnown RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 HOMEZQ8IX15 550 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 A6NNZ2 444 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 TUBB8Q3ZCM7 444 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 CCDC141Q6ZP82 1450 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 MAGI1Q96QZ7 1491 aaPredicted RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 LMAN1P49257 510 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 SART3Q15020 963 aaKnown RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 UVSSAQ2YD98 709 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 CHMP7Q8WUX9 453 aaPredicted RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 TUBBP07437 444 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 TNNT1P13805 278 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 PDE3AQ14432 1141 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 TAOK3Q9H2K8 898 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 ARHGEF12Q9NZN5 1544 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 PNISRQ8TF01 805 aaKnown RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 ZFYP08048 801 aaPredicted RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 ANKRD30BQ9BXX2 1392 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 FIBPO43427 364 aa4.91□□□□□ -1.62
DMD-230ENST00000620040 GABPB1Q06547 395 aaPredicted RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 STMN4Q9H169 189 aaPredicted RBP4.91□□□□□ -1.62
DMD-230ENST00000620040 KIF5BP33176 963 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 ZSCAN31Q96LW9 406 aaPredicted RBP4.9□□□□□ -1.62
DMD-230ENST00000620040 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.62
DMD-230ENST00000620040 SH2D4BQ5SQS7 431 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 CEP112Q8N8E3 955 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 FBXW7Q969H0 707 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 FMNL2Q96PY5 1086 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 TCHPQ9BT92 498 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 PPP6R1Q9UPN7 881 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 POLA1P09884 1462 aaPredicted RBP4.9□□□□□ -1.62
DMD-230ENST00000620040 NUP155O75694 1391 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 CETN2P41208 172 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 CCDC9Q9Y3X0 531 aaKnown RBP4.9□□□□□ -1.62
DMD-230ENST00000620040 DESP17661 470 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 TRIM34Q9BYJ4 488 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 SUDS3Q9H7L9 328 aaPredicted RBP4.9□□□□□ -1.62
DMD-230ENST00000620040 ARFGAP3Q9NP61 516 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 FAM184BQ9ULE4 1060 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 IFFO1Q0D2I5 559 aa4.9□□□□□ -1.62
DMD-230ENST00000620040 SEPT11Q9NVA2 429 aaKnown RBP4.9□□□□□ -1.62
DMD-230ENST00000620040 IBTKQ9P2D0 1353 aaPredicted RBP4.9□□□□□ -1.63
DMD-230ENST00000620040 CTAGE5O15320 804 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 NEK4P51957 841 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 CDK5RAP3Q96JB5 506 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 CROCCQ5TZA2 2017 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 FMNL3Q8IVF7 1028 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 CCDC150Q8NCX0 1101 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 MYCBPQ99417 103 aaPredicted RBP4.9□□□□□ -1.63
DMD-230ENST00000620040 OGFRQ9NZT2 677 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 CLIP2Q9UDT6 1046 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 USH1CQ9Y6N9 552 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 RPRD2Q5VT52 1461 aaKnown RBP4.9□□□□□ -1.63
DMD-230ENST00000620040 CDKL5O76039 1030 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 L3MBTL2Q969R5 705 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 CYP46A1Q9Y6A2 500 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 POTEDQ86YR6 584 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 RUNDC1Q96C34 613 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 SPATA32Q96LK8 384 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 TTC14Q96N46 770 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 MRVI1Q9Y6F6 885 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 ANO10Q9NW15 660 aa4.9□□□□□ -1.63
DMD-230ENST00000620040 C9orf78Q9NZ63 289 aaPredicted RBP4.9□□□□□ -1.63
DMD-230ENST00000620040 DDX58O95786 925 aaKnown RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 SPA17Q15506 151 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 SEPT14Q6ZU15 432 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 G3BP1Q13283 466 aaKnown RBP eCLIP4.89□□□□□ -1.63
DMD-230ENST00000620040 ALS2CR12Q96Q35 445 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 HMGB1P1B2RPK0 211 aaPredicted RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 EBAG9O00559 213 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 OPA1O60313 960 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 NOL3O60936 208 aaKnown RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 VPS36Q86VN1 386 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 GRIN2BQ13224 1484 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 SYCE3A1L190 88 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 GNAI1P63096 354 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 FBF1Q8TES7 1133 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 PUS7Q96PZ0 661 aaKnown RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 ME1P48163 572 aa4.89□□□□□ -1.63
DMD-230ENST00000620040 RRAGDQ9NQL2 400 aaPredicted RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 SCAND2PQ9GZW5 306 aaPredicted RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 CKAP4Q07065 602 aaKnown RBP4.89□□□□□ -1.63
DMD-230ENST00000620040 FBXO3Q9UK99 471 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms