RNA–Protein interactions for RNA: ENST00000619924.1

LINC01140-211, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

Gene LINC01140, Length 1,034 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-211ENST00000619924 U2AF1L5P0DN76 240 aaPredicted RBP29.87■■■□□ 2.37
LINC01140-211ENST00000619924 TATP17735 454 aaPredicted RBP29.87■■■□□ 2.37
LINC01140-211ENST00000619924 U2AF1Q01081 240 aaKnown RBP eCLIP29.87■■■□□ 2.37
LINC01140-211ENST00000619924 MRS2Q9HD23 443 aa29.87■■■□□ 2.37
LINC01140-211ENST00000619924 A0A0G2JS52 829 aa29.85■■■□□ 2.37
LINC01140-211ENST00000619924 MYT1Q01538 1121 aa29.85■■■□□ 2.37
LINC01140-211ENST00000619924 CCER2I3L3R5 266 aa29.84■■■□□ 2.37
LINC01140-211ENST00000619924 DDB1Q16531 1140 aa29.84■■■□□ 2.37
LINC01140-211ENST00000619924 ILDR2Q71H61 639 aa29.83■■■□□ 2.37
LINC01140-211ENST00000619924 MIER1Q8N108 512 aa29.83■■■□□ 2.37
LINC01140-211ENST00000619924 FCHSD2O94868 740 aa29.82■■■□□ 2.36
LINC01140-211ENST00000619924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.82■■■□□ 2.36
LINC01140-211ENST00000619924 VIRMAQ69YN4 1812 aaKnown RBP29.81■■■□□ 2.36
LINC01140-211ENST00000619924 WDR43Q15061 677 aaKnown RBP eCLIP29.8■■■□□ 2.36
LINC01140-211ENST00000619924 PNISRQ8TF01 805 aaKnown RBP29.8■■■□□ 2.36
LINC01140-211ENST00000619924 PRKAR2BP31323 418 aa29.79■■■□□ 2.36
LINC01140-211ENST00000619924 ZCRB1Q8TBF4 217 aaKnown RBP29.79■■■□□ 2.36
LINC01140-211ENST00000619924 SBF2Q86WG5 1849 aa29.79■■■□□ 2.36
LINC01140-211ENST00000619924 PCDH11XQ9BZA7 1347 aa29.78■■■□□ 2.36
LINC01140-211ENST00000619924 PCDH11YQ9BZA8 1340 aa29.78■■■□□ 2.36
LINC01140-211ENST00000619924 EXOC5O00471 708 aa29.78■■■□□ 2.36
LINC01140-211ENST00000619924 TOGARAM1Q9Y4F4 1720 aa29.78■■■□□ 2.36
LINC01140-211ENST00000619924 DOT1LQ8TEK3 1739 aa29.77■■■□□ 2.36
LINC01140-211ENST00000619924 DLG5Q8TDM6 1919 aa29.77■■■□□ 2.36
LINC01140-211ENST00000619924 ADAMTS7Q9UKP4 1686 aa29.77■■■□□ 2.36
LINC01140-211ENST00000619924 PLEKHF1Q96S99 279 aa29.77■■■□□ 2.36
LINC01140-211ENST00000619924 BCL9O00512 1426 aa29.77■■■□□ 2.36
LINC01140-211ENST00000619924 AMOTQ4VCS5 1084 aa29.76■■■□□ 2.35
LINC01140-211ENST00000619924 KRT27Q7Z3Y8 459 aa29.76■■■□□ 2.35
LINC01140-211ENST00000619924 ADAMTS8Q9UP79 889 aa29.76■■■□□ 2.35
LINC01140-211ENST00000619924 SPG7Q9UQ90 795 aa29.75■■■□□ 2.35
LINC01140-211ENST00000619924 PLEKHO1Q53GL0 409 aaPredicted RBP29.74■■■□□ 2.35
LINC01140-211ENST00000619924 MARCH10Q8NA82 808 aaPredicted RBP29.74■■■□□ 2.35
LINC01140-211ENST00000619924 SCN11AQ9UI33 1791 aa29.74■■■□□ 2.35
LINC01140-211ENST00000619924 NHSQ6T4R5 1651 aa29.73■■■□□ 2.35
LINC01140-211ENST00000619924 PDE3BQ13370 1112 aa29.73■■■□□ 2.35
LINC01140-211ENST00000619924 CYP27B1O15528 508 aa29.72■■■□□ 2.35
LINC01140-211ENST00000619924 PHACTR3Q96KR7 559 aa29.71■■■□□ 2.35
LINC01140-211ENST00000619924 PNNQ9H307 717 aaKnown RBP29.7■■■□□ 2.35
LINC01140-211ENST00000619924 PHKG2P15735 406 aa29.69■■■□□ 2.34
LINC01140-211ENST00000619924 MTHFSDQ2M296 383 aaKnown RBP29.69■■■□□ 2.34
LINC01140-211ENST00000619924 ZNF530Q6P9A1 599 aaPredicted RBP29.68■■■□□ 2.34
LINC01140-211ENST00000619924 ITGB4P16144 1822 aa29.68■■■□□ 2.34
LINC01140-211ENST00000619924 TNS1Q9HBL0 1735 aaKnown RBP29.68■■■□□ 2.34
LINC01140-211ENST00000619924 GAS2L2Q8NHY3 880 aa29.67■■■□□ 2.34
LINC01140-211ENST00000619924 DDX54Q8TDD1 881 aaKnown RBP29.67■■■□□ 2.34
LINC01140-211ENST00000619924 KDM6AO15550 1401 aaPredicted RBP29.67■■■□□ 2.34
LINC01140-211ENST00000619924 IFNL2Q8IZJ0 200 aa29.66■■■□□ 2.34
LINC01140-211ENST00000619924 MAPK8IP3Q9UPT6 1336 aa29.66■■■□□ 2.34
LINC01140-211ENST00000619924 NKX1-1Q15270 411 aaPredicted RBP29.65■■■□□ 2.34
LINC01140-211ENST00000619924 FAM182BQ5T319 152 aa29.65■■■□□ 2.34
LINC01140-211ENST00000619924 MAP3K5Q99683 1374 aa29.64■■■□□ 2.34
LINC01140-211ENST00000619924 MRC1P22897 1456 aa29.64■■■□□ 2.34
LINC01140-211ENST00000619924 CCDC146Q8IYE0 955 aa29.64■■■□□ 2.34
LINC01140-211ENST00000619924 RUNDC1Q96C34 613 aa29.64■■■□□ 2.34
LINC01140-211ENST00000619924 AKAP4Q5JQC9 854 aa29.63■■■□□ 2.33
LINC01140-211ENST00000619924 SIPA1L3O60292 1781 aaPredicted RBP29.62■■■□□ 2.33
LINC01140-211ENST00000619924 NEFMP07197 916 aa29.62■■■□□ 2.33
LINC01140-211ENST00000619924 KAT6BQ8WYB5 2073 aa29.61■■■□□ 2.33
LINC01140-211ENST00000619924 C1orf141Q5JVX7 400 aa29.61■■■□□ 2.33
LINC01140-211ENST00000619924 FAM196AQ6ZSG2 479 aa29.61■■■□□ 2.33
LINC01140-211ENST00000619924 BTAF1O14981 1849 aa29.6■■■□□ 2.33
LINC01140-211ENST00000619924 FAM9BQ8IZU0 186 aa29.6■■■□□ 2.33
LINC01140-211ENST00000619924 HSP90AB1P08238 724 aaKnown RBP29.59■■■□□ 2.33
LINC01140-211ENST00000619924 NFE2L2Q16236 605 aa29.59■■■□□ 2.33
LINC01140-211ENST00000619924 DCAF5Q96JK2 942 aa29.57■■■□□ 2.32
LINC01140-211ENST00000619924 SOCS7O14512 581 aa29.56■■■□□ 2.32
LINC01140-211ENST00000619924 RGPD3A6NKT7 1758 aaPredicted RBP29.55■■■□□ 2.32
LINC01140-211ENST00000619924 RGPD4Q7Z3J3 1758 aa29.55■■■□□ 2.32
LINC01140-211ENST00000619924 GNAT3A8MTJ3 354 aa29.55■■■□□ 2.32
LINC01140-211ENST00000619924 TMPOP42166 694 aaKnown RBP29.55■■■□□ 2.32
LINC01140-211ENST00000619924 PAPPAQ13219 1627 aa29.55■■■□□ 2.32
LINC01140-211ENST00000619924 CEMIPQ8WUJ3 1361 aa29.54■■■□□ 2.32
LINC01140-211ENST00000619924 MPRIPQ6WCQ1 1025 aa29.52■■■□□ 2.32
LINC01140-211ENST00000619924 APAF1O14727 1248 aa29.51■■■□□ 2.31
LINC01140-211ENST00000619924 HTATSF1O43719 755 aaKnown RBP29.51■■■□□ 2.31
LINC01140-211ENST00000619924 RNMTO43148 476 aaKnown RBP29.5■■■□□ 2.31
LINC01140-211ENST00000619924 ACSBG1Q96GR2 724 aa29.5■■■□□ 2.31
LINC01140-211ENST00000619924 ERVV-2B6SEH9 535 aa29.48■■■□□ 2.31
LINC01140-211ENST00000619924 IL17REQ8NFR9 667 aa29.48■■■□□ 2.31
LINC01140-211ENST00000619924 LGR6Q9HBX8 967 aa29.48■■■□□ 2.31
LINC01140-211ENST00000619924 RRP7AQ9Y3A4 280 aaKnown RBP29.48■■■□□ 2.31
LINC01140-211ENST00000619924 KCNQ2O43526 872 aa29.47■■■□□ 2.31
LINC01140-211ENST00000619924 RIPK4P57078 832 aa29.47■■■□□ 2.31
LINC01140-211ENST00000619924 LY75O60449 1722 aa29.47■■■□□ 2.31
LINC01140-211ENST00000619924 TRIM37O94972 964 aa29.46■■■□□ 2.31
LINC01140-211ENST00000619924 PRIM1P49642 420 aaKnown RBP29.46■■■□□ 2.31
LINC01140-211ENST00000619924 PTF1AQ7RTS3 328 aa29.46■■■□□ 2.31
LINC01140-211ENST00000619924 BCL11BQ9C0K0 894 aaPredicted RBP29.46■■■□□ 2.31
LINC01140-211ENST00000619924 UBR2Q8IWV8 1755 aa29.46■■■□□ 2.31
LINC01140-211ENST00000619924 KDM3BQ7LBC6 1761 aa29.45■■■□□ 2.31
LINC01140-211ENST00000619924 LMOD3Q0VAK6 560 aa29.45■■■□□ 2.31
LINC01140-211ENST00000619924 NCBP3Q53F19 620 aaKnown RBP29.45■■■□□ 2.31
LINC01140-211ENST00000619924 RTF1Q92541 710 aaKnown RBP29.44■■■□□ 2.3
LINC01140-211ENST00000619924 SLC52A2Q9HAB3 445 aa29.44■■■□□ 2.3
LINC01140-211ENST00000619924 TRIM35Q9UPQ4 493 aa29.44■■■□□ 2.3
LINC01140-211ENST00000619924 MCM10Q7L590 875 aa29.43■■■□□ 2.3
LINC01140-211ENST00000619924 DCTN1Q14203 1278 aa29.42■■■□□ 2.3
LINC01140-211ENST00000619924 SYTL4Q96C24 671 aaPredicted RBP29.42■■■□□ 2.3
LINC01140-211ENST00000619924 NEUROD2Q15784 382 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms