RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 CNTNAP3BQ96NU0 1288 aa12.48□□□□□ -0.41
CBWD1-228ENST00000619157 CNTNAP3Q9BZ76 1288 aa12.48□□□□□ -0.41
CBWD1-228ENST00000619157 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
CBWD1-228ENST00000619157 PTSQ03393 145 aa12.47□□□□□ -0.41
CBWD1-228ENST00000619157 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.47□□□□□ -0.41
CBWD1-228ENST00000619157 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
CBWD1-228ENST00000619157 LOC100996750A0A140TA64 210 aa12.46□□□□□ -0.41
CBWD1-228ENST00000619157 GSK3AP49840 483 aa12.46□□□□□ -0.41
CBWD1-228ENST00000619157 PDE4DQ08499 809 aa12.46□□□□□ -0.41
CBWD1-228ENST00000619157 KRTAP4-6Q9BYQ5 205 aa12.46□□□□□ -0.41
CBWD1-228ENST00000619157 KCNMA1Q12791 1236 aa12.45□□□□□ -0.42
CBWD1-228ENST00000619157 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
CBWD1-228ENST00000619157 MAPKBP1O60336 1514 aa12.45□□□□□ -0.42
CBWD1-228ENST00000619157 TUSC1Q2TAM9 212 aa12.44□□□□□ -0.42
CBWD1-228ENST00000619157 PPP1R26Q5T8A7 1209 aaPredicted RBP12.44□□□□□ -0.42
CBWD1-228ENST00000619157 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
CBWD1-228ENST00000619157 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
CBWD1-228ENST00000619157 KIF21BO75037 1637 aa12.44□□□□□ -0.42
CBWD1-228ENST00000619157 CLK2P49760 499 aaKnown RBP12.43□□□□□ -0.42
CBWD1-228ENST00000619157 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
CBWD1-228ENST00000619157 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
CBWD1-228ENST00000619157 COL25A1Q9BXS0 654 aaPredicted RBP12.42□□□□□ -0.42
CBWD1-228ENST00000619157 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
CBWD1-228ENST00000619157 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
CBWD1-228ENST00000619157 PLB1Q6P1J6 1458 aa12.41□□□□□ -0.42
CBWD1-228ENST00000619157 SAMD9Q5K651 1589 aa12.41□□□□□ -0.42
CBWD1-228ENST00000619157 GOLGA3Q08378 1498 aa12.4□□□□□ -0.42
CBWD1-228ENST00000619157 DIP2BQ9P265 1576 aa12.4□□□□□ -0.42
CBWD1-228ENST00000619157 SUZ12Q15022 739 aaKnown RBP12.4□□□□□ -0.42
CBWD1-228ENST00000619157 CCDC155Q8N6L0 562 aa12.4□□□□□ -0.42
CBWD1-228ENST00000619157 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
CBWD1-228ENST00000619157 ABCA8O94911 1581 aa12.39□□□□□ -0.43
CBWD1-228ENST00000619157 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
CBWD1-228ENST00000619157 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
CBWD1-228ENST00000619157 RNFT1Q5M7Z0 435 aa12.39□□□□□ -0.43
CBWD1-228ENST00000619157 AGBL1Q96MI9 1066 aa12.39□□□□□ -0.43
CBWD1-228ENST00000619157 Q6ZVU0 165 aa12.38□□□□□ -0.43
CBWD1-228ENST00000619157 ARHGAP9Q9BRR9 750 aa12.38□□□□□ -0.43
CBWD1-228ENST00000619157 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
CBWD1-228ENST00000619157 SPINT1O43278 529 aa12.37□□□□□ -0.43
CBWD1-228ENST00000619157 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
CBWD1-228ENST00000619157 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
CBWD1-228ENST00000619157 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
CBWD1-228ENST00000619157 KCTD15Q96SI1 283 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-228ENST00000619157 RASSF7Q02833 373 aa12.36□□□□□ -0.43
CBWD1-228ENST00000619157 TMEM151AQ8N4L1 468 aa12.36□□□□□ -0.43
CBWD1-228ENST00000619157 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
CBWD1-228ENST00000619157 ZCCHC11Q5TAX3 1644 aaKnown RBP12.36□□□□□ -0.43
CBWD1-228ENST00000619157 ASXL2Q76L83 1435 aa12.36□□□□□ -0.43
CBWD1-228ENST00000619157 CDC14CA4D256 554 aa12.35□□□□□ -0.43
CBWD1-228ENST00000619157 GDF11O95390 407 aa12.35□□□□□ -0.43
CBWD1-228ENST00000619157 CTSOP43234 321 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-228ENST00000619157 RELBQ01201 579 aa12.35□□□□□ -0.43
CBWD1-228ENST00000619157 FAM69CQ0P6D2 419 aa12.35□□□□□ -0.43
CBWD1-228ENST00000619157 SVOPQ8N4V2 548 aa12.35□□□□□ -0.43
CBWD1-228ENST00000619157 ZNF385CQ66K41 422 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-228ENST00000619157 INSM2Q96T92 566 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-228ENST00000619157 VWA5B2Q8N398 1253 aa12.33□□□□□ -0.44
CBWD1-228ENST00000619157 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
CBWD1-228ENST00000619157 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
CBWD1-228ENST00000619157 FKBPLQ9UIM3 349 aa12.33□□□□□ -0.44
CBWD1-228ENST00000619157 FHOD3Q2V2M9 1422 aa12.33□□□□□ -0.44
CBWD1-228ENST00000619157 SLC35F4A4IF30 521 aa12.32□□□□□ -0.44
CBWD1-228ENST00000619157 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
CBWD1-228ENST00000619157 INTS6LQ5JSJ4 861 aaKnown RBP12.32□□□□□ -0.44
CBWD1-228ENST00000619157 PDXDC2PQ6P474 469 aa12.32□□□□□ -0.44
CBWD1-228ENST00000619157 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
CBWD1-228ENST00000619157 ITGA6P23229 1130 aa12.31□□□□□ -0.44
CBWD1-228ENST00000619157 NR6A1Q15406 480 aa12.31□□□□□ -0.44
CBWD1-228ENST00000619157 POLMQ9NP87 494 aaPredicted RBP12.31□□□□□ -0.44
CBWD1-228ENST00000619157 RAB15P59190 212 aa12.3□□□□□ -0.44
CBWD1-228ENST00000619157 FBXO31Q5XUX0 539 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-228ENST00000619157 ZNF395Q9H8N7 513 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-228ENST00000619157 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
CBWD1-228ENST00000619157 GLI2P10070 1586 aa12.3□□□□□ -0.44
CBWD1-228ENST00000619157 RNF225M0QZC1 329 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-228ENST00000619157 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
CBWD1-228ENST00000619157 ATP10BO94823 1461 aa12.28□□□□□ -0.44
CBWD1-228ENST00000619157 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
CBWD1-228ENST00000619157 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
CBWD1-228ENST00000619157 DHX9Q08211 1270 aaKnown RBP12.28□□□□□ -0.44
CBWD1-228ENST00000619157 OCSTAMPQ9BR26 566 aa12.28□□□□□ -0.44
CBWD1-228ENST00000619157 TMPRSS4Q9NRS4 437 aa12.28□□□□□ -0.44
CBWD1-228ENST00000619157 PPRC1Q5VV67 1664 aaKnown RBP12.28□□□□□ -0.44
CBWD1-228ENST00000619157 NUP153P49790 1475 aaKnown RBP12.27□□□□□ -0.44
CBWD1-228ENST00000619157 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
CBWD1-228ENST00000619157 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
CBWD1-228ENST00000619157 ARID3CA6NKF2 412 aa12.27□□□□□ -0.45
CBWD1-228ENST00000619157 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
CBWD1-228ENST00000619157 SV2AQ7L0J3 742 aa12.27□□□□□ -0.45
CBWD1-228ENST00000619157 CDV3Q9UKY7 258 aaKnown RBP12.27□□□□□ -0.45
CBWD1-228ENST00000619157 RNF217Q8TC41 542 aa12.26□□□□□ -0.45
CBWD1-228ENST00000619157 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
CBWD1-228ENST00000619157 SLURP2P0DP57 97 aa12.24□□□□□ -0.45
CBWD1-228ENST00000619157 IRS1P35568 1242 aa12.24□□□□□ -0.45
CBWD1-228ENST00000619157 ADAM32Q8TC27 787 aa12.24□□□□□ -0.45
CBWD1-228ENST00000619157 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
CBWD1-228ENST00000619157 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
CBWD1-228ENST00000619157 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
CBWD1-228ENST00000619157 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms