RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 MRC1P22897 1456 aa15.36■□□□□ 0.05
PDPN-211ENST00000617617 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
PDPN-211ENST00000617617 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
PDPN-211ENST00000617617 LRP6O75581 1613 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 CEMIPQ8WUJ3 1361 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
PDPN-211ENST00000617617 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 BABAM1Q9NWV8 329 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 IFT57Q9NWB7 429 aa15.35■□□□□ 0.05
PDPN-211ENST00000617617 CT47B1P0C2W7 299 aaPredicted RBP15.34■□□□□ 0.05
PDPN-211ENST00000617617 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
PDPN-211ENST00000617617 SPINK5Q9NQ38 1064 aaPredicted RBP15.33■□□□□ 0.04
PDPN-211ENST00000617617 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
PDPN-211ENST00000617617 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
PDPN-211ENST00000617617 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
PDPN-211ENST00000617617 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
PDPN-211ENST00000617617 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
PDPN-211ENST00000617617 NLRP2Q9NX02 1062 aa15.31■□□□□ 0.04
PDPN-211ENST00000617617 THRAP3Q9Y2W1 955 aaKnown RBP15.31■□□□□ 0.04
PDPN-211ENST00000617617 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
PDPN-211ENST00000617617 GNAI1P63096 354 aa15.31■□□□□ 0.04
PDPN-211ENST00000617617 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
PDPN-211ENST00000617617 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
PDPN-211ENST00000617617 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
PDPN-211ENST00000617617 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
PDPN-211ENST00000617617 BTG4Q9NY30 223 aa15.3■□□□□ 0.04
PDPN-211ENST00000617617 HSPA1LP34931 641 aa15.3■□□□□ 0.04
PDPN-211ENST00000617617 THSD7AQ9UPZ6 1657 aa15.3■□□□□ 0.04
PDPN-211ENST00000617617 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
PDPN-211ENST00000617617 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
PDPN-211ENST00000617617 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
PDPN-211ENST00000617617 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
PDPN-211ENST00000617617 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
PDPN-211ENST00000617617 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
PDPN-211ENST00000617617 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
PDPN-211ENST00000617617 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
PDPN-211ENST00000617617 CDCA7Q9BWT1 371 aaPredicted RBP15.29■□□□□ 0.04
PDPN-211ENST00000617617 CHL1O00533 1208 aa15.28■□□□□ 0.04
PDPN-211ENST00000617617 EVA1CP58658 441 aa15.28■□□□□ 0.04
PDPN-211ENST00000617617 TOM1L2Q6ZVM7 507 aa15.28■□□□□ 0.04
PDPN-211ENST00000617617 ITGB4P16144 1822 aa15.27■□□□□ 0.04
PDPN-211ENST00000617617 IL2RBP14784 551 aa15.27■□□□□ 0.04
PDPN-211ENST00000617617 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
PDPN-211ENST00000617617 ZNF428Q96B54 188 aa15.27■□□□□ 0.04
PDPN-211ENST00000617617 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
PDPN-211ENST00000617617 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.03
PDPN-211ENST00000617617 SPATA31A1Q5TZJ5 1347 aa15.27■□□□□ 0.03
PDPN-211ENST00000617617 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.03
PDPN-211ENST00000617617 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.03
PDPN-211ENST00000617617 NKX1-1Q15270 411 aaPredicted RBP15.26■□□□□ 0.03
PDPN-211ENST00000617617 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
PDPN-211ENST00000617617 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
PDPN-211ENST00000617617 TNS2Q63HR2 1409 aa15.26■□□□□ 0.03
PDPN-211ENST00000617617 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
PDPN-211ENST00000617617 BARGINQ6ZT62 677 aa15.26■□□□□ 0.03
PDPN-211ENST00000617617 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
PDPN-211ENST00000617617 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
PDPN-211ENST00000617617 HSP90AB1P08238 724 aaKnown RBP15.25■□□□□ 0.03
PDPN-211ENST00000617617 IL17REQ8NFR9 667 aa15.25■□□□□ 0.03
PDPN-211ENST00000617617 PHKG2P15735 406 aa15.25■□□□□ 0.03
PDPN-211ENST00000617617 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
PDPN-211ENST00000617617 UNC5CLQ8IV45 518 aa15.25■□□□□ 0.03
PDPN-211ENST00000617617 VPS72Q15906 364 aa15.24■□□□□ 0.03
PDPN-211ENST00000617617 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
PDPN-211ENST00000617617 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
PDPN-211ENST00000617617 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
PDPN-211ENST00000617617 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
PDPN-211ENST00000617617 MCM10Q7L590 875 aa15.23■□□□□ 0.03
PDPN-211ENST00000617617 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
PDPN-211ENST00000617617 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
PDPN-211ENST00000617617 GLI3P10071 1580 aa15.23■□□□□ 0.03
PDPN-211ENST00000617617 ATRNO75882 1429 aa15.23■□□□□ 0.03
PDPN-211ENST00000617617 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
PDPN-211ENST00000617617 N4BP2Q86UW6 1770 aaPredicted RBP15.23■□□□□ 0.03
PDPN-211ENST00000617617 CICQ96RK0 1608 aaPredicted RBP15.22■□□□□ 0.03
PDPN-211ENST00000617617 ADAMTS2O95450 1211 aa15.22■□□□□ 0.03
PDPN-211ENST00000617617 ZCRB1Q8TBF4 217 aaKnown RBP15.22■□□□□ 0.03
PDPN-211ENST00000617617 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
PDPN-211ENST00000617617 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
PDPN-211ENST00000617617 DCAF5Q96JK2 942 aa15.22■□□□□ 0.03
PDPN-211ENST00000617617 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
PDPN-211ENST00000617617 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
PDPN-211ENST00000617617 NUTM2BA6NNL0 878 aaPredicted RBP15.21■□□□□ 0.03
PDPN-211ENST00000617617 NUTM2EB1AL46 878 aaPredicted RBP15.21■□□□□ 0.03
PDPN-211ENST00000617617 CYP27B1O15528 508 aa15.21■□□□□ 0.03
PDPN-211ENST00000617617 NUTM2AQ8IVF1 878 aaPredicted RBP15.21■□□□□ 0.03
PDPN-211ENST00000617617 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
PDPN-211ENST00000617617 ALDH1L2Q3SY69 923 aa15.21■□□□□ 0.02
PDPN-211ENST00000617617 ZNF831Q5JPB2 1677 aa15.2■□□□□ 0.02
PDPN-211ENST00000617617 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
PDPN-211ENST00000617617 HEG1Q9ULI3 1381 aa15.2■□□□□ 0.02
PDPN-211ENST00000617617 TSR2Q969E8 191 aaKnown RBP15.2■□□□□ 0.02
PDPN-211ENST00000617617 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
PDPN-211ENST00000617617 C5P01031 1676 aa15.18■□□□□ 0.02
PDPN-211ENST00000617617 ERVV-2B6SEH9 535 aa15.18■□□□□ 0.02
PDPN-211ENST00000617617 RARSP54136 660 aaKnown RBP15.18■□□□□ 0.02
PDPN-211ENST00000617617 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
PDPN-211ENST00000617617 LGR6Q9HBX8 967 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms