RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 PAPPAQ13219 1627 aa10.56□□□□□ -0.72
FAM228B-209ENST00000615135 YBX3P16989 372 aaKnown RBP eCLIP10.56□□□□□ -0.72
FAM228B-209ENST00000615135 APLP1P51693 650 aa10.56□□□□□ -0.72
FAM228B-209ENST00000615135 SAFB2Q14151 953 aaKnown RBP eCLIP10.56□□□□□ -0.72
FAM228B-209ENST00000615135 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
FAM228B-209ENST00000615135 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
FAM228B-209ENST00000615135 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
FAM228B-209ENST00000615135 POGKQ9P215 609 aa10.55□□□□□ -0.72
FAM228B-209ENST00000615135 USP19O94966 1318 aa10.55□□□□□ -0.72
FAM228B-209ENST00000615135 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
FAM228B-209ENST00000615135 NLGN2Q8NFZ4 835 aa10.54□□□□□ -0.72
FAM228B-209ENST00000615135 CDCA7Q9BWT1 371 aaPredicted RBP10.54□□□□□ -0.72
FAM228B-209ENST00000615135 GOLGB1Q14789 3259 aaKnown RBP10.53□□□□□ -0.72
FAM228B-209ENST00000615135 CFAP70Q5T0N1 1121 aa10.53□□□□□ -0.72
FAM228B-209ENST00000615135 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
FAM228B-209ENST00000615135 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
FAM228B-209ENST00000615135 KIF3CO14782 793 aa10.52□□□□□ -0.73
FAM228B-209ENST00000615135 POLD1P28340 1107 aa10.52□□□□□ -0.73
FAM228B-209ENST00000615135 NUTM2GQ5VZR2 741 aa10.52□□□□□ -0.73
FAM228B-209ENST00000615135 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.73
FAM228B-209ENST00000615135 POLR3AO14802 1390 aaPredicted RBP10.52□□□□□ -0.73
FAM228B-209ENST00000615135 QSER1Q2KHR3 1735 aa10.51□□□□□ -0.73
FAM228B-209ENST00000615135 GCP02774 474 aa10.51□□□□□ -0.73
FAM228B-209ENST00000615135 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
FAM228B-209ENST00000615135 JMYQ8N9B5 988 aa10.51□□□□□ -0.73
FAM228B-209ENST00000615135 HIRIP3Q9BW71 556 aaPredicted RBP10.51□□□□□ -0.73
FAM228B-209ENST00000615135 AKAP12Q02952 1782 aa10.51□□□□□ -0.73
FAM228B-209ENST00000615135 SP7Q8TDD2 431 aaPredicted RBP10.5□□□□□ -0.73
FAM228B-209ENST00000615135 ITSN1Q15811 1721 aa10.5□□□□□ -0.73
FAM228B-209ENST00000615135 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
FAM228B-209ENST00000615135 TNS4Q8IZW8 715 aa10.49□□□□□ -0.73
FAM228B-209ENST00000615135 ABTB2Q8N961 1025 aa10.49□□□□□ -0.73
FAM228B-209ENST00000615135 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
FAM228B-209ENST00000615135 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
FAM228B-209ENST00000615135 TOPAZ1Q8N9V7 1692 aa10.49□□□□□ -0.73
FAM228B-209ENST00000615135 MINK1Q8N4C8 1332 aaPredicted RBP10.49□□□□□ -0.73
FAM228B-209ENST00000615135 ADGRB1O14514 1584 aa10.48□□□□□ -0.73
FAM228B-209ENST00000615135 PLEKHG3A1L390 1219 aa10.48□□□□□ -0.73
FAM228B-209ENST00000615135 MAP3K13O43283 966 aa10.48□□□□□ -0.73
FAM228B-209ENST00000615135 LRRC4BQ9NT99 713 aa10.48□□□□□ -0.73
FAM228B-209ENST00000615135 TONSLQ96HA7 1378 aa10.48□□□□□ -0.73
FAM228B-209ENST00000615135 NHSQ6T4R5 1651 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 EVX2Q03828 476 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 TOM1L2Q6ZVM7 507 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
FAM228B-209ENST00000615135 NLRP13Q86W25 1043 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 ACEP12821 1306 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 PNPLA7Q6ZV29 1317 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 WDR17Q8IZU2 1322 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 BRD4O60885 1362 aaPredicted RBP10.47□□□□□ -0.73
FAM228B-209ENST00000615135 COL18A1P39060 1754 aa10.47□□□□□ -0.73
FAM228B-209ENST00000615135 EXOC5O00471 708 aa10.46□□□□□ -0.73
FAM228B-209ENST00000615135 PSEN1P49768 467 aa10.46□□□□□ -0.73
FAM228B-209ENST00000615135 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
FAM228B-209ENST00000615135 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
FAM228B-209ENST00000615135 TOMM70O94826 608 aa10.45□□□□□ -0.74
FAM228B-209ENST00000615135 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
FAM228B-209ENST00000615135 KLRG1Q96E93 195 aa10.45□□□□□ -0.74
FAM228B-209ENST00000615135 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
FAM228B-209ENST00000615135 CARD10Q9BWT7 1032 aa10.45□□□□□ -0.74
FAM228B-209ENST00000615135 TRAK1Q9UPV9 953 aa10.45□□□□□ -0.74
FAM228B-209ENST00000615135 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
FAM228B-209ENST00000615135 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
FAM228B-209ENST00000615135 CD2APQ9Y5K6 639 aa10.44□□□□□ -0.74
FAM228B-209ENST00000615135 USP6P35125 1406 aa10.43□□□□□ -0.74
FAM228B-209ENST00000615135 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
FAM228B-209ENST00000615135 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
FAM228B-209ENST00000615135 ARHGEF28Q8N1W1 1705 aaKnown RBP10.43□□□□□ -0.74
FAM228B-209ENST00000615135 BTAF1O14981 1849 aa10.42□□□□□ -0.74
FAM228B-209ENST00000615135 WDR90Q96KV7 1748 aa10.42□□□□□ -0.74
FAM228B-209ENST00000615135 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
FAM228B-209ENST00000615135 SLIT3O75094 1523 aa10.42□□□□□ -0.74
FAM228B-209ENST00000615135 TNS2Q63HR2 1409 aa10.41□□□□□ -0.74
FAM228B-209ENST00000615135 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
FAM228B-209ENST00000615135 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
FAM228B-209ENST00000615135 CDK19Q9BWU1 502 aa10.41□□□□□ -0.74
FAM228B-209ENST00000615135 TUBGCP6Q96RT7 1819 aa10.41□□□□□ -0.74
FAM228B-209ENST00000615135 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.74
FAM228B-209ENST00000615135 CCDC7Q96M83 1385 aa10.4□□□□□ -0.74
FAM228B-209ENST00000615135 ABCC6O95255 1503 aa10.4□□□□□ -0.74
FAM228B-209ENST00000615135 ACSBG1Q96GR2 724 aa10.4□□□□□ -0.74
FAM228B-209ENST00000615135 TFCP2L1Q9NZI6 479 aa10.4□□□□□ -0.74
FAM228B-209ENST00000615135 ARHGEF25Q86VW2 580 aa10.39□□□□□ -0.75
FAM228B-209ENST00000615135 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
FAM228B-209ENST00000615135 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
FAM228B-209ENST00000615135 MPHOSPH9Q99550 1183 aa10.38□□□□□ -0.75
FAM228B-209ENST00000615135 WWC3Q9ULE0 1092 aa10.38□□□□□ -0.75
FAM228B-209ENST00000615135 CENPBP07199 599 aaPredicted RBP10.37□□□□□ -0.75
FAM228B-209ENST00000615135 NLRP6P59044 892 aa10.37□□□□□ -0.75
FAM228B-209ENST00000615135 CPSF1Q10570 1443 aaKnown RBP10.37□□□□□ -0.75
FAM228B-209ENST00000615135 PPIP5K1Q6PFW1 1433 aa10.37□□□□□ -0.75
FAM228B-209ENST00000615135 COL23A1Q86Y22 540 aaPredicted RBP10.37□□□□□ -0.75
FAM228B-209ENST00000615135 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
FAM228B-209ENST00000615135 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
FAM228B-209ENST00000615135 CICQ96RK0 1608 aaPredicted RBP10.36□□□□□ -0.75
FAM228B-209ENST00000615135 FSTL1Q12841 308 aa10.36□□□□□ -0.75
FAM228B-209ENST00000615135 SIN3AQ96ST3 1273 aa10.36□□□□□ -0.75
FAM228B-209ENST00000615135 RGPD5Q99666 1765 aa10.36□□□□□ -0.75
FAM228B-209ENST00000615135 ZBTB7CA1YPR0 619 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms