RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 CHD4Q14839 1912 aa16.89■□□□□ 0.29
PDLIM2-218ENST00000614502 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.29
PDLIM2-218ENST00000614502 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
PDLIM2-218ENST00000614502 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
PDLIM2-218ENST00000614502 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
PDLIM2-218ENST00000614502 QSER1Q2KHR3 1735 aa16.87■□□□□ 0.29
PDLIM2-218ENST00000614502 DDX54Q8TDD1 881 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-218ENST00000614502 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
PDLIM2-218ENST00000614502 LY75O60449 1722 aa16.84■□□□□ 0.29
PDLIM2-218ENST00000614502 KCNQ4P56696 695 aa16.84■□□□□ 0.29
PDLIM2-218ENST00000614502 RRS1Q15050 365 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-218ENST00000614502 MEGF6O75095 1541 aa16.83■□□□□ 0.28
PDLIM2-218ENST00000614502 INSRP06213 1382 aa16.83■□□□□ 0.28
PDLIM2-218ENST00000614502 FLT4P35916 1363 aa16.83■□□□□ 0.28
PDLIM2-218ENST00000614502 COL24A1Q17RW2 1714 aa16.83■□□□□ 0.28
PDLIM2-218ENST00000614502 ZCRB1Q8TBF4 217 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-218ENST00000614502 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
PDLIM2-218ENST00000614502 CCER1Q8TC90 406 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-218ENST00000614502 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
PDLIM2-218ENST00000614502 ARXQ96QS3 562 aa16.82■□□□□ 0.28
PDLIM2-218ENST00000614502 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-218ENST00000614502 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
PDLIM2-218ENST00000614502 NSD2O96028 1365 aa16.81■□□□□ 0.28
PDLIM2-218ENST00000614502 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-218ENST00000614502 SLC27A3Q5K4L6 730 aa16.81■□□□□ 0.28
PDLIM2-218ENST00000614502 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-218ENST00000614502 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-218ENST00000614502 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-218ENST00000614502 PNPLA7Q6ZV29 1317 aa16.79■□□□□ 0.28
PDLIM2-218ENST00000614502 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-218ENST00000614502 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDLIM2-218ENST00000614502 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
PDLIM2-218ENST00000614502 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
PDLIM2-218ENST00000614502 GOLGB1Q14789 3259 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-218ENST00000614502 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
PDLIM2-218ENST00000614502 CARD14Q9BXL6 1004 aa16.78■□□□□ 0.28
PDLIM2-218ENST00000614502 ANKRD26Q9UPS8 1709 aa16.78■□□□□ 0.28
PDLIM2-218ENST00000614502 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
PDLIM2-218ENST00000614502 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
PDLIM2-218ENST00000614502 PCDH11XQ9BZA7 1347 aa16.76■□□□□ 0.27
PDLIM2-218ENST00000614502 PCDH11YQ9BZA8 1340 aa16.76■□□□□ 0.27
PDLIM2-218ENST00000614502 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
PDLIM2-218ENST00000614502 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
PDLIM2-218ENST00000614502 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
PDLIM2-218ENST00000614502 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
PDLIM2-218ENST00000614502 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
PDLIM2-218ENST00000614502 C5P01031 1676 aa16.73■□□□□ 0.27
PDLIM2-218ENST00000614502 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
PDLIM2-218ENST00000614502 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
PDLIM2-218ENST00000614502 ITGB4P16144 1822 aa16.73■□□□□ 0.27
PDLIM2-218ENST00000614502 WASHC2AQ641Q2 1341 aa16.72■□□□□ 0.27
PDLIM2-218ENST00000614502 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-218ENST00000614502 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
PDLIM2-218ENST00000614502 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-218ENST00000614502 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
PDLIM2-218ENST00000614502 GPR162Q16538 588 aa16.71■□□□□ 0.27
PDLIM2-218ENST00000614502 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
PDLIM2-218ENST00000614502 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-218ENST00000614502 POLD1P28340 1107 aa16.7■□□□□ 0.26
PDLIM2-218ENST00000614502 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
PDLIM2-218ENST00000614502 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-218ENST00000614502 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-218ENST00000614502 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
PDLIM2-218ENST00000614502 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
PDLIM2-218ENST00000614502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDLIM2-218ENST00000614502 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
PDLIM2-218ENST00000614502 MSH5O43196 834 aa16.67■□□□□ 0.26
PDLIM2-218ENST00000614502 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-218ENST00000614502 EYA1Q99502 592 aa16.66■□□□□ 0.26
PDLIM2-218ENST00000614502 PANK3Q9H999 370 aa16.66■□□□□ 0.26
PDLIM2-218ENST00000614502 CYP27B1O15528 508 aa16.65■□□□□ 0.26
PDLIM2-218ENST00000614502 YBX3P16989 372 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDLIM2-218ENST00000614502 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-218ENST00000614502 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
PDLIM2-218ENST00000614502 PALLDQ8WX93 1383 aa16.64■□□□□ 0.26
PDLIM2-218ENST00000614502 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
PDLIM2-218ENST00000614502 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
PDLIM2-218ENST00000614502 UBR3Q6ZT12 1888 aa16.64■□□□□ 0.25
PDLIM2-218ENST00000614502 C1QTNF8P60827 252 aa16.63■□□□□ 0.25
PDLIM2-218ENST00000614502 AMIGO3Q86WK7 504 aa16.63■□□□□ 0.25
PDLIM2-218ENST00000614502 IFNL2Q8IZJ0 200 aa16.63■□□□□ 0.25
PDLIM2-218ENST00000614502 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
PDLIM2-218ENST00000614502 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-218ENST00000614502 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
PDLIM2-218ENST00000614502 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-218ENST00000614502 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
PDLIM2-218ENST00000614502 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
PDLIM2-218ENST00000614502 HSP90AB1P08238 724 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-218ENST00000614502 PIGBQ92521 554 aa16.59■□□□□ 0.25
PDLIM2-218ENST00000614502 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
PDLIM2-218ENST00000614502 PHKG2P15735 406 aa16.58■□□□□ 0.24
PDLIM2-218ENST00000614502 IGSF1Q8N6C5 1336 aa16.58■□□□□ 0.24
PDLIM2-218ENST00000614502 AMOTQ4VCS5 1084 aa16.57■□□□□ 0.24
PDLIM2-218ENST00000614502 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-218ENST00000614502 AK7Q96M32 723 aa16.57■□□□□ 0.24
PDLIM2-218ENST00000614502 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-218ENST00000614502 PHF14O94880 888 aa16.56■□□□□ 0.24
PDLIM2-218ENST00000614502 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
PDLIM2-218ENST00000614502 SIK1P57059 783 aa16.55■□□□□ 0.24
PDLIM2-218ENST00000614502 ZNF831Q5JPB2 1677 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms