RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 UCN2Q96RP3 112 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
SCAMP1-205ENST00000614488 LZTS3O60299 673 aaPredicted RBP10.45□□□□□ -0.74
SCAMP1-205ENST00000614488 SKIP12755 728 aa10.45□□□□□ -0.74
SCAMP1-205ENST00000614488 RELBQ01201 579 aa10.45□□□□□ -0.74
SCAMP1-205ENST00000614488 USP4Q13107 963 aa10.45□□□□□ -0.74
SCAMP1-205ENST00000614488 KDF1Q8NAX2 398 aaPredicted RBP10.45□□□□□ -0.74
SCAMP1-205ENST00000614488 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
SCAMP1-205ENST00000614488 ERICH6Q7L0X2 663 aa10.44□□□□□ -0.74
SCAMP1-205ENST00000614488 CALR3Q96L12 384 aaKnown RBP10.44□□□□□ -0.74
SCAMP1-205ENST00000614488 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
SCAMP1-205ENST00000614488 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
SCAMP1-205ENST00000614488 SNRPBP14678 240 aaKnown RBP10.42□□□□□ -0.74
SCAMP1-205ENST00000614488 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
SCAMP1-205ENST00000614488 ATP9BO43861 1147 aa10.41□□□□□ -0.74
SCAMP1-205ENST00000614488 EML3Q32P44 896 aa10.41□□□□□ -0.74
SCAMP1-205ENST00000614488 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
SCAMP1-205ENST00000614488 ZNF777Q9ULD5 760 aaPredicted RBP10.41□□□□□ -0.74
SCAMP1-205ENST00000614488 GNRH1P01148 92 aa10.4□□□□□ -0.74
SCAMP1-205ENST00000614488 TBC1D9Q6ZT07 1266 aa10.4□□□□□ -0.74
SCAMP1-205ENST00000614488 ZNF395Q9H8N7 513 aaPredicted RBP10.4□□□□□ -0.74
SCAMP1-205ENST00000614488 TTLL8A6PVC2 850 aa10.39□□□□□ -0.75
SCAMP1-205ENST00000614488 INSM2Q96T92 566 aaPredicted RBP10.39□□□□□ -0.75
SCAMP1-205ENST00000614488 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 CLN3Q13286 438 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 NCOA4Q13772 614 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
SCAMP1-205ENST00000614488 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
SCAMP1-205ENST00000614488 MAN1A2O60476 641 aa10.37□□□□□ -0.75
SCAMP1-205ENST00000614488 CTSOP43234 321 aaPredicted RBP10.37□□□□□ -0.75
SCAMP1-205ENST00000614488 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
SCAMP1-205ENST00000614488 POLMQ9NP87 494 aaPredicted RBP10.37□□□□□ -0.75
SCAMP1-205ENST00000614488 GPC1P35052 558 aa10.36□□□□□ -0.75
SCAMP1-205ENST00000614488 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-205ENST00000614488 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
SCAMP1-205ENST00000614488 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
SCAMP1-205ENST00000614488 PALM3A6NDB9 673 aaPredicted RBP10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 RNF144AP50876 292 aaPredicted RBP10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 DEPDC4Q8N2C3 294 aa10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 RNF217Q8TC41 542 aa10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 TFIP11Q9UBB9 837 aaKnown RBP10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 MAFBQ9Y5Q3 323 aaPredicted RBP10.35□□□□□ -0.75
SCAMP1-205ENST00000614488 MEN1O00255 615 aa10.34□□□□□ -0.75
SCAMP1-205ENST00000614488 TRIM50Q86XT4 487 aa10.34□□□□□ -0.75
SCAMP1-205ENST00000614488 NLRP3Q96P20 1036 aa10.34□□□□□ -0.75
SCAMP1-205ENST00000614488 WASLO00401 505 aaPredicted RBP10.33□□□□□ -0.76
SCAMP1-205ENST00000614488 GTF2IP78347 998 aa10.33□□□□□ -0.76
SCAMP1-205ENST00000614488 ESYT1Q9BSJ8 1104 aa10.33□□□□□ -0.76
SCAMP1-205ENST00000614488 RAB6BQ9NRW1 208 aa10.33□□□□□ -0.76
SCAMP1-205ENST00000614488 PCDHGA11Q9Y5H2 935 aa10.33□□□□□ -0.76
SCAMP1-205ENST00000614488 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
SCAMP1-205ENST00000614488 IL2RAP01589 272 aa10.32□□□□□ -0.76
SCAMP1-205ENST00000614488 CNKSR1Q969H4 720 aa10.32□□□□□ -0.76
SCAMP1-205ENST00000614488 XAGE2Q96GT9 111 aa10.32□□□□□ -0.76
SCAMP1-205ENST00000614488 ETNK1Q9HBU6 452 aa10.32□□□□□ -0.76
SCAMP1-205ENST00000614488 ATP1A2P50993 1020 aa10.31□□□□□ -0.76
SCAMP1-205ENST00000614488 SCNN1DP51172 638 aa10.31□□□□□ -0.76
SCAMP1-205ENST00000614488 HRH3Q9Y5N1 445 aa10.31□□□□□ -0.76
SCAMP1-205ENST00000614488 FIGNL2A6NMB9 653 aa10.3□□□□□ -0.76
SCAMP1-205ENST00000614488 GDF10P55107 478 aa10.3□□□□□ -0.76
SCAMP1-205ENST00000614488 INHAP05111 366 aa10.29□□□□□ -0.76
SCAMP1-205ENST00000614488 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
SCAMP1-205ENST00000614488 LYSMD3Q7Z3D4 306 aa10.29□□□□□ -0.76
SCAMP1-205ENST00000614488 ZNF775Q96BV0 537 aaPredicted RBP10.29□□□□□ -0.76
SCAMP1-205ENST00000614488 GRIP2Q9C0E4 1043 aa10.29□□□□□ -0.76
SCAMP1-205ENST00000614488 MKRN1Q9UHC7 482 aaKnown RBP10.29□□□□□ -0.76
SCAMP1-205ENST00000614488 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 CENPCQ03188 943 aa10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 PSME1Q06323 249 aa10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 NPAS3Q8IXF0 933 aa10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 FHDC1Q9C0D6 1143 aaPredicted RBP10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
SCAMP1-205ENST00000614488 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 CLDN10P78369 228 aa10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 LARGE2Q8N3Y3 721 aa10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 CCDC97Q96F63 343 aaPredicted RBP10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 DNAAF2Q9NVR5 837 aaKnown RBP10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 SERPINA10Q9UK55 444 aa10.26□□□□□ -0.77
SCAMP1-205ENST00000614488 PTSQ03393 145 aa10.25□□□□□ -0.77
SCAMP1-205ENST00000614488 TLR1Q15399 786 aa10.25□□□□□ -0.77
SCAMP1-205ENST00000614488 SIX5Q8N196 739 aa10.25□□□□□ -0.77
SCAMP1-205ENST00000614488 OGFOD1Q8N543 542 aa10.25□□□□□ -0.77
SCAMP1-205ENST00000614488 ZSCAN10Q96SZ4 725 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-205ENST00000614488 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
SCAMP1-205ENST00000614488 TERTO14746 1132 aaKnown RBP10.24□□□□□ -0.77
SCAMP1-205ENST00000614488 BACH1O14867 736 aa10.24□□□□□ -0.77
SCAMP1-205ENST00000614488 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
SCAMP1-205ENST00000614488 WDR44Q5JSH3 913 aa10.24□□□□□ -0.77
SCAMP1-205ENST00000614488 KANK4Q5T7N3 995 aaPredicted RBP10.24□□□□□ -0.77
SCAMP1-205ENST00000614488 PRICKLE2Q7Z3G6 844 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms