RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 NLRP6P59044 892 aa15.39■□□□□ 0.05
SLIRP-212ENST00000613856 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
SLIRP-212ENST00000613856 SLC15A2Q16348 729 aa15.39■□□□□ 0.05
SLIRP-212ENST00000613856 COG3Q96JB2 828 aa15.39■□□□□ 0.05
SLIRP-212ENST00000613856 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
SLIRP-212ENST00000613856 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
SLIRP-212ENST00000613856 BTAF1O14981 1849 aa15.38■□□□□ 0.05
SLIRP-212ENST00000613856 BCL9O00512 1426 aa15.37■□□□□ 0.05
SLIRP-212ENST00000613856 SOX12O15370 315 aa15.37■□□□□ 0.05
SLIRP-212ENST00000613856 STK32BQ9NY57 414 aa15.37■□□□□ 0.05
SLIRP-212ENST00000613856 TUBGCP6Q96RT7 1819 aa15.36■□□□□ 0.05
SLIRP-212ENST00000613856 COL3A1P02461 1466 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-212ENST00000613856 NFAT5O94916 1531 aa15.35■□□□□ 0.05
SLIRP-212ENST00000613856 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
SLIRP-212ENST00000613856 ACSBG1Q96GR2 724 aa15.35■□□□□ 0.05
SLIRP-212ENST00000613856 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
SLIRP-212ENST00000613856 INSRP06213 1382 aa15.35■□□□□ 0.05
SLIRP-212ENST00000613856 CEP350Q5VT06 3117 aa15.34■□□□□ 0.05
SLIRP-212ENST00000613856 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
SLIRP-212ENST00000613856 LTN1O94822 1766 aa15.34■□□□□ 0.05
SLIRP-212ENST00000613856 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
SLIRP-212ENST00000613856 KAT6BQ8WYB5 2073 aa15.33■□□□□ 0.04
SLIRP-212ENST00000613856 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.04
SLIRP-212ENST00000613856 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
SLIRP-212ENST00000613856 PNISRQ8TF01 805 aaKnown RBP15.33■□□□□ 0.04
SLIRP-212ENST00000613856 ARXQ96QS3 562 aa15.32■□□□□ 0.04
SLIRP-212ENST00000613856 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
SLIRP-212ENST00000613856 MTHFSP49914 203 aa15.31■□□□□ 0.04
SLIRP-212ENST00000613856 CARD10Q9BWT7 1032 aa15.31■□□□□ 0.04
SLIRP-212ENST00000613856 LRRC4BQ9NT99 713 aa15.31■□□□□ 0.04
SLIRP-212ENST00000613856 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
SLIRP-212ENST00000613856 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
SLIRP-212ENST00000613856 CFAP53Q96M91 514 aa15.3■□□□□ 0.04
SLIRP-212ENST00000613856 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
SLIRP-212ENST00000613856 ABCC6O95255 1503 aa15.29■□□□□ 0.04
SLIRP-212ENST00000613856 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
SLIRP-212ENST00000613856 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
SLIRP-212ENST00000613856 RTL1A6NKG5 1358 aa15.28■□□□□ 0.04
SLIRP-212ENST00000613856 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
SLIRP-212ENST00000613856 EXOC5O00471 708 aa15.28■□□□□ 0.04
SLIRP-212ENST00000613856 KCNQ4P56696 695 aa15.28■□□□□ 0.04
SLIRP-212ENST00000613856 KCNH5Q8NCM2 988 aa15.28■□□□□ 0.04
SLIRP-212ENST00000613856 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
SLIRP-212ENST00000613856 QSER1Q2KHR3 1735 aa15.28■□□□□ 0.04
SLIRP-212ENST00000613856 GPR162Q16538 588 aa15.27■□□□□ 0.04
SLIRP-212ENST00000613856 NLGN2Q8NFZ4 835 aa15.27■□□□□ 0.04
SLIRP-212ENST00000613856 FLT4P35916 1363 aa15.26■□□□□ 0.03
SLIRP-212ENST00000613856 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
SLIRP-212ENST00000613856 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
SLIRP-212ENST00000613856 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
SLIRP-212ENST00000613856 MAP3K19Q56UN5 1328 aa15.25■□□□□ 0.03
SLIRP-212ENST00000613856 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-212ENST00000613856 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
SLIRP-212ENST00000613856 WDR43Q15061 677 aaKnown RBP eCLIP15.25■□□□□ 0.03
SLIRP-212ENST00000613856 FBLN1P23142 703 aa15.24■□□□□ 0.03
SLIRP-212ENST00000613856 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
SLIRP-212ENST00000613856 YBX3P16989 372 aaKnown RBP eCLIP15.23■□□□□ 0.03
SLIRP-212ENST00000613856 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
SLIRP-212ENST00000613856 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
SLIRP-212ENST00000613856 DIAPH1O60610 1272 aaKnown RBP15.22■□□□□ 0.03
SLIRP-212ENST00000613856 ERBB3P21860 1342 aa15.21■□□□□ 0.03
SLIRP-212ENST00000613856 NLRP2Q9NX02 1062 aa15.21■□□□□ 0.03
SLIRP-212ENST00000613856 NUDCQ9Y266 331 aa15.21■□□□□ 0.03
SLIRP-212ENST00000613856 LY75O60449 1722 aa15.2■□□□□ 0.02
SLIRP-212ENST00000613856 FAM208AQ9UK61 1670 aaKnown RBP15.2■□□□□ 0.02
SLIRP-212ENST00000613856 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
SLIRP-212ENST00000613856 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
SLIRP-212ENST00000613856 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
SLIRP-212ENST00000613856 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
SLIRP-212ENST00000613856 IL2RBP14784 551 aa15.19■□□□□ 0.02
SLIRP-212ENST00000613856 HOXC9P31274 260 aa15.19■□□□□ 0.02
SLIRP-212ENST00000613856 IL13P35225 146 aa15.19■□□□□ 0.02
SLIRP-212ENST00000613856 AMPHP49418 695 aa15.18■□□□□ 0.02
SLIRP-212ENST00000613856 IP6K1Q92551 441 aa15.18■□□□□ 0.02
SLIRP-212ENST00000613856 ANKRD24Q8TF21 1146 aa15.17■□□□□ 0.02
SLIRP-212ENST00000613856 HNRNPUQ00839 825 aaKnown RBP eCLIP15.16■□□□□ 0.02
SLIRP-212ENST00000613856 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
SLIRP-212ENST00000613856 HSP90AB2PQ58FF8 381 aa15.16■□□□□ 0.02
SLIRP-212ENST00000613856 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
SLIRP-212ENST00000613856 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
SLIRP-212ENST00000613856 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
SLIRP-212ENST00000613856 DDX54Q8TDD1 881 aaKnown RBP15.15■□□□□ 0.02
SLIRP-212ENST00000613856 ZBED9Q6R2W3 1325 aa15.15■□□□□ 0.02
SLIRP-212ENST00000613856 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
SLIRP-212ENST00000613856 POLD1P28340 1107 aa15.14■□□□□ 0.01
SLIRP-212ENST00000613856 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
SLIRP-212ENST00000613856 TFCP2L1Q9NZI6 479 aa15.14■□□□□ 0.01
SLIRP-212ENST00000613856 NCAPD2Q15021 1401 aa15.14■□□□□ 0.01
SLIRP-212ENST00000613856 KDRP35968 1356 aa15.13■□□□□ 0.01
SLIRP-212ENST00000613856 SLC16A10Q8TF71 515 aa15.13■□□□□ 0.01
SLIRP-212ENST00000613856 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
SLIRP-212ENST00000613856 IGSF1Q8N6C5 1336 aa15.13■□□□□ 0.01
SLIRP-212ENST00000613856 FCHSD2O94868 740 aa15.12■□□□□ 0.01
SLIRP-212ENST00000613856 PRIM1P49642 420 aaKnown RBP15.12■□□□□ 0.01
SLIRP-212ENST00000613856 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-212ENST00000613856 RUNDC1Q96C34 613 aa15.12■□□□□ 0.01
SLIRP-212ENST00000613856 SLC27A3Q5K4L6 730 aa15.11■□□□□ 0.01
SLIRP-212ENST00000613856 COL23A1Q86Y22 540 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-212ENST00000613856 NGEFQ8N5V2 710 aa15.11■□□□□ 0.01
SLIRP-212ENST00000613856 ZNF526Q8TF50 670 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms