RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 USHBP1Q8N6Y0 703 aa17.37■□□□□ 0.37
SRGAP2C-204ENST00000613462 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
SRGAP2C-204ENST00000613462 DDB1Q16531 1140 aa17.36■□□□□ 0.37
SRGAP2C-204ENST00000613462 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
SRGAP2C-204ENST00000613462 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
SRGAP2C-204ENST00000613462 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
SRGAP2C-204ENST00000613462 EXOC5O00471 708 aa17.34■□□□□ 0.37
SRGAP2C-204ENST00000613462 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
SRGAP2C-204ENST00000613462 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
SRGAP2C-204ENST00000613462 SULT6B1Q6IMI4 303 aa17.34■□□□□ 0.37
SRGAP2C-204ENST00000613462 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
SRGAP2C-204ENST00000613462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
SRGAP2C-204ENST00000613462 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
SRGAP2C-204ENST00000613462 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 DEFB132Q7Z7B7 95 aa17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
SRGAP2C-204ENST00000613462 BCL9O00512 1426 aa17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 FCHSD2O94868 740 aa17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 HMOX1P09601 288 aa17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 AMOTQ4VCS5 1084 aa17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
SRGAP2C-204ENST00000613462 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
SRGAP2C-204ENST00000613462 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
SRGAP2C-204ENST00000613462 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
SRGAP2C-204ENST00000613462 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
SRGAP2C-204ENST00000613462 PLEKHO1Q53GL0 409 aaPredicted RBP17.28■□□□□ 0.36
SRGAP2C-204ENST00000613462 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
SRGAP2C-204ENST00000613462 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.36
SRGAP2C-204ENST00000613462 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
SRGAP2C-204ENST00000613462 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.35
SRGAP2C-204ENST00000613462 ITGB4P16144 1822 aa17.26■□□□□ 0.35
SRGAP2C-204ENST00000613462 NEFMP07197 916 aa17.26■□□□□ 0.35
SRGAP2C-204ENST00000613462 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
SRGAP2C-204ENST00000613462 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
SRGAP2C-204ENST00000613462 MARCH10Q8NA82 808 aaPredicted RBP17.25■□□□□ 0.35
SRGAP2C-204ENST00000613462 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
SRGAP2C-204ENST00000613462 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
SRGAP2C-204ENST00000613462 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
SRGAP2C-204ENST00000613462 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
SRGAP2C-204ENST00000613462 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
SRGAP2C-204ENST00000613462 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
SRGAP2C-204ENST00000613462 HSP90AB1P08238 724 aaKnown RBP17.23■□□□□ 0.35
SRGAP2C-204ENST00000613462 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
SRGAP2C-204ENST00000613462 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
SRGAP2C-204ENST00000613462 BTAF1O14981 1849 aa17.22■□□□□ 0.35
SRGAP2C-204ENST00000613462 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
SRGAP2C-204ENST00000613462 GAS2L2Q8NHY3 880 aa17.22■□□□□ 0.35
SRGAP2C-204ENST00000613462 CYP27B1O15528 508 aa17.21■□□□□ 0.35
SRGAP2C-204ENST00000613462 PHKG2P15735 406 aa17.21■□□□□ 0.35
SRGAP2C-204ENST00000613462 NKX1-1Q15270 411 aaPredicted RBP17.21■□□□□ 0.35
SRGAP2C-204ENST00000613462 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
SRGAP2C-204ENST00000613462 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
SRGAP2C-204ENST00000613462 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
SRGAP2C-204ENST00000613462 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
SRGAP2C-204ENST00000613462 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
SRGAP2C-204ENST00000613462 PLEKHF1Q96S99 279 aa17.19■□□□□ 0.34
SRGAP2C-204ENST00000613462 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
SRGAP2C-204ENST00000613462 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
SRGAP2C-204ENST00000613462 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
SRGAP2C-204ENST00000613462 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
SRGAP2C-204ENST00000613462 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
SRGAP2C-204ENST00000613462 RUNDC1Q96C34 613 aa17.17■□□□□ 0.34
SRGAP2C-204ENST00000613462 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
SRGAP2C-204ENST00000613462 KDM6AO15550 1401 aaPredicted RBP17.16■□□□□ 0.34
SRGAP2C-204ENST00000613462 MRC1P22897 1456 aa17.16■□□□□ 0.34
SRGAP2C-204ENST00000613462 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
SRGAP2C-204ENST00000613462 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
SRGAP2C-204ENST00000613462 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
SRGAP2C-204ENST00000613462 LY75O60449 1722 aa17.14■□□□□ 0.33
SRGAP2C-204ENST00000613462 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
SRGAP2C-204ENST00000613462 HTATSF1O43719 755 aaKnown RBP17.14■□□□□ 0.33
SRGAP2C-204ENST00000613462 TRIM37O94972 964 aa17.14■□□□□ 0.33
SRGAP2C-204ENST00000613462 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
SRGAP2C-204ENST00000613462 MIER1Q8N108 512 aa17.14■□□□□ 0.33
SRGAP2C-204ENST00000613462 PAPPAQ13219 1627 aa17.13■□□□□ 0.33
SRGAP2C-204ENST00000613462 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
SRGAP2C-204ENST00000613462 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
SRGAP2C-204ENST00000613462 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
SRGAP2C-204ENST00000613462 ACSBG1Q96GR2 724 aa17.12■□□□□ 0.33
SRGAP2C-204ENST00000613462 RREB1Q92766 1687 aa17.11■□□□□ 0.33
SRGAP2C-204ENST00000613462 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
SRGAP2C-204ENST00000613462 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
SRGAP2C-204ENST00000613462 SYTL4Q96C24 671 aaPredicted RBP17.11■□□□□ 0.33
SRGAP2C-204ENST00000613462 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
SRGAP2C-204ENST00000613462 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
SRGAP2C-204ENST00000613462 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-204ENST00000613462 TMPOP42166 694 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-204ENST00000613462 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
SRGAP2C-204ENST00000613462 UTRNP46939 3433 aa17.09■□□□□ 0.33
SRGAP2C-204ENST00000613462 KCNQ2O43526 872 aa17.09■□□□□ 0.33
SRGAP2C-204ENST00000613462 BAG6P46379 1132 aa17.09■□□□□ 0.33
SRGAP2C-204ENST00000613462 CABP4P57796 275 aa17.09■□□□□ 0.33
SRGAP2C-204ENST00000613462 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
SRGAP2C-204ENST00000613462 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms