RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 LTN1O94822 1766 aa17.67■□□□□ 0.42
COPS7B-223ENST00000611614 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
COPS7B-223ENST00000611614 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
COPS7B-223ENST00000611614 KDRP35968 1356 aa17.66■□□□□ 0.42
COPS7B-223ENST00000611614 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
COPS7B-223ENST00000611614 ZKSCAN2Q63HK3 967 aa17.65■□□□□ 0.42
COPS7B-223ENST00000611614 CABLES1Q8TDN4 633 aa17.65■□□□□ 0.42
COPS7B-223ENST00000611614 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
COPS7B-223ENST00000611614 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
COPS7B-223ENST00000611614 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
COPS7B-223ENST00000611614 PCDHB15Q9Y5E8 787 aa17.63■□□□□ 0.41
COPS7B-223ENST00000611614 MED1Q15648 1581 aaPredicted RBP17.62■□□□□ 0.41
COPS7B-223ENST00000611614 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
COPS7B-223ENST00000611614 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
COPS7B-223ENST00000611614 LTBP4Q8N2S1 1624 aa17.62■□□□□ 0.41
COPS7B-223ENST00000611614 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
COPS7B-223ENST00000611614 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
COPS7B-223ENST00000611614 SMC4Q9NTJ3 1288 aa17.62■□□□□ 0.41
COPS7B-223ENST00000611614 GNAI1P63096 354 aa17.61■□□□□ 0.41
COPS7B-223ENST00000611614 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
COPS7B-223ENST00000611614 FTSJ3Q8IY81 847 aaKnown RBP17.61■□□□□ 0.41
COPS7B-223ENST00000611614 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
COPS7B-223ENST00000611614 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
COPS7B-223ENST00000611614 SSH1Q8WYL5 1049 aa17.6■□□□□ 0.41
COPS7B-223ENST00000611614 RWDD1Q9H446 243 aaPredicted RBP17.6■□□□□ 0.41
COPS7B-223ENST00000611614 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
COPS7B-223ENST00000611614 MTHFSDQ2M296 383 aaKnown RBP17.59■□□□□ 0.41
COPS7B-223ENST00000611614 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
COPS7B-223ENST00000611614 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
COPS7B-223ENST00000611614 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
COPS7B-223ENST00000611614 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
COPS7B-223ENST00000611614 IFT57Q9NWB7 429 aa17.59■□□□□ 0.41
COPS7B-223ENST00000611614 TOM1O60784 492 aa17.58■□□□□ 0.41
COPS7B-223ENST00000611614 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
COPS7B-223ENST00000611614 CPDO75976 1380 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 ERBB3P21860 1342 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 TRIM27P14373 513 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 DCTN1Q14203 1278 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
COPS7B-223ENST00000611614 VIRMAQ69YN4 1812 aaKnown RBP17.56■□□□□ 0.4
COPS7B-223ENST00000611614 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
COPS7B-223ENST00000611614 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
COPS7B-223ENST00000611614 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
COPS7B-223ENST00000611614 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 GSE1Q14687 1217 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 NFKBIBQ15653 356 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 MCM10Q7L590 875 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 NOB1Q9ULX3 412 aaKnown RBP17.55■□□□□ 0.4
COPS7B-223ENST00000611614 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
COPS7B-223ENST00000611614 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
COPS7B-223ENST00000611614 KIF16BQ96L93 1317 aa17.54■□□□□ 0.4
COPS7B-223ENST00000611614 AMOTQ4VCS5 1084 aa17.54■□□□□ 0.4
COPS7B-223ENST00000611614 IPO8O15397 1037 aaKnown RBP17.54■□□□□ 0.4
COPS7B-223ENST00000611614 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
COPS7B-223ENST00000611614 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
COPS7B-223ENST00000611614 ABCC6O95255 1503 aa17.53■□□□□ 0.4
COPS7B-223ENST00000611614 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
COPS7B-223ENST00000611614 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
COPS7B-223ENST00000611614 ZNF853P0CG23 659 aa17.52■□□□□ 0.4
COPS7B-223ENST00000611614 MBIPQ9NS73 344 aa17.52■□□□□ 0.4
COPS7B-223ENST00000611614 PIP4K2BP78356 416 aa17.52■□□□□ 0.39
COPS7B-223ENST00000611614 ITPRIPQ8IWB1 547 aa17.52■□□□□ 0.39
COPS7B-223ENST00000611614 IL27Q8NEV9 243 aa17.52■□□□□ 0.39
COPS7B-223ENST00000611614 MAP3K5Q99683 1374 aa17.51■□□□□ 0.39
COPS7B-223ENST00000611614 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
COPS7B-223ENST00000611614 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
COPS7B-223ENST00000611614 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
COPS7B-223ENST00000611614 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
COPS7B-223ENST00000611614 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
COPS7B-223ENST00000611614 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
COPS7B-223ENST00000611614 CRYBG1Q9Y4K1 1723 aa17.49■□□□□ 0.39
COPS7B-223ENST00000611614 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
COPS7B-223ENST00000611614 EVA1CP58658 441 aa17.48■□□□□ 0.39
COPS7B-223ENST00000611614 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
COPS7B-223ENST00000611614 AHDC1Q5TGY3 1603 aaPredicted RBP17.48■□□□□ 0.39
COPS7B-223ENST00000611614 CHL1O00533 1208 aa17.48■□□□□ 0.39
COPS7B-223ENST00000611614 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
COPS7B-223ENST00000611614 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
COPS7B-223ENST00000611614 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
COPS7B-223ENST00000611614 ZBTB40Q9NUA8 1239 aa17.47■□□□□ 0.39
COPS7B-223ENST00000611614 TSPYL4Q9UJ04 414 aa17.47■□□□□ 0.39
COPS7B-223ENST00000611614 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
COPS7B-223ENST00000611614 VAMP4O75379 141 aa17.46■□□□□ 0.39
COPS7B-223ENST00000611614 SEC24BO95487 1268 aa17.46■□□□□ 0.39
COPS7B-223ENST00000611614 TWISTNBQ3B726 338 aaPredicted RBP17.46■□□□□ 0.39
COPS7B-223ENST00000611614 SPG7Q9UQ90 795 aa17.46■□□□□ 0.39
COPS7B-223ENST00000611614 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
COPS7B-223ENST00000611614 COL18A1P39060 1754 aa17.46■□□□□ 0.39
COPS7B-223ENST00000611614 WDR17Q8IZU2 1322 aa17.45■□□□□ 0.38
COPS7B-223ENST00000611614 CRB1P82279 1406 aa17.45■□□□□ 0.38
COPS7B-223ENST00000611614 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
COPS7B-223ENST00000611614 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
COPS7B-223ENST00000611614 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
COPS7B-223ENST00000611614 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
COPS7B-223ENST00000611614 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms