RNA–Protein interactions for RNA: ENST00000609038.1

AP000553.2-201, humanhuman

BASIC

Gene AP000553.2, Length 441 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.2-201ENST00000609038 NLRP2Q9NX02 1062 aa17.78■□□□□ 0.44
AP000553.2-201ENST00000609038 ATRNO75882 1429 aa17.78■□□□□ 0.44
AP000553.2-201ENST00000609038 NEFMP07197 916 aa17.77■□□□□ 0.44
AP000553.2-201ENST00000609038 PRKAR2BP31323 418 aa17.77■□□□□ 0.44
AP000553.2-201ENST00000609038 BARGINQ6ZT62 677 aa17.77■□□□□ 0.44
AP000553.2-201ENST00000609038 AEBP1Q8IUX7 1158 aa17.77■□□□□ 0.44
AP000553.2-201ENST00000609038 USP21Q9UK80 565 aa17.77■□□□□ 0.44
AP000553.2-201ENST00000609038 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
AP000553.2-201ENST00000609038 HMOX1P09601 288 aa17.76■□□□□ 0.43
AP000553.2-201ENST00000609038 AMOTQ4VCS5 1084 aa17.76■□□□□ 0.43
AP000553.2-201ENST00000609038 STRN4Q9NRL3 753 aa17.76■□□□□ 0.43
AP000553.2-201ENST00000609038 AFF2P51816 1311 aa17.75■□□□□ 0.43
AP000553.2-201ENST00000609038 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
AP000553.2-201ENST00000609038 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
AP000553.2-201ENST00000609038 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
AP000553.2-201ENST00000609038 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
AP000553.2-201ENST00000609038 MEGF6O75095 1541 aa17.74■□□□□ 0.43
AP000553.2-201ENST00000609038 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
AP000553.2-201ENST00000609038 TRPC5Q9UL62 973 aaPredicted RBP17.74■□□□□ 0.43
AP000553.2-201ENST00000609038 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
AP000553.2-201ENST00000609038 IL2RBP14784 551 aa17.73■□□□□ 0.43
AP000553.2-201ENST00000609038 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
AP000553.2-201ENST00000609038 RAPGEF4Q8WZA2 1011 aa17.73■□□□□ 0.43
AP000553.2-201ENST00000609038 GLI3P10071 1580 aa17.73■□□□□ 0.43
AP000553.2-201ENST00000609038 THSD7AQ9UPZ6 1657 aa17.73■□□□□ 0.43
AP000553.2-201ENST00000609038 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
AP000553.2-201ENST00000609038 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
AP000553.2-201ENST00000609038 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
AP000553.2-201ENST00000609038 PHACTR3Q96KR7 559 aa17.72■□□□□ 0.43
AP000553.2-201ENST00000609038 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
AP000553.2-201ENST00000609038 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
AP000553.2-201ENST00000609038 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
AP000553.2-201ENST00000609038 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
AP000553.2-201ENST00000609038 APAF1O14727 1248 aa17.7■□□□□ 0.42
AP000553.2-201ENST00000609038 ONECUT3O60422 494 aaPredicted RBP17.7■□□□□ 0.42
AP000553.2-201ENST00000609038 CCDC146Q8IYE0 955 aa17.7■□□□□ 0.42
AP000553.2-201ENST00000609038 ZBED9Q6R2W3 1325 aa17.7■□□□□ 0.42
AP000553.2-201ENST00000609038 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
AP000553.2-201ENST00000609038 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
AP000553.2-201ENST00000609038 GJD4Q96KN9 370 aaPredicted RBP17.69■□□□□ 0.42
AP000553.2-201ENST00000609038 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
AP000553.2-201ENST00000609038 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
AP000553.2-201ENST00000609038 TNS2Q63HR2 1409 aa17.68■□□□□ 0.42
AP000553.2-201ENST00000609038 ILDR1Q86SU0 546 aaPredicted RBP17.68■□□□□ 0.42
AP000553.2-201ENST00000609038 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
AP000553.2-201ENST00000609038 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
AP000553.2-201ENST00000609038 HNRNPUQ00839 825 aaKnown RBP eCLIP17.66■□□□□ 0.42
AP000553.2-201ENST00000609038 AKAP4Q5JQC9 854 aa17.66■□□□□ 0.42
AP000553.2-201ENST00000609038 PCDH11XQ9BZA7 1347 aa17.66■□□□□ 0.42
AP000553.2-201ENST00000609038 PCDH11YQ9BZA8 1340 aa17.66■□□□□ 0.42
AP000553.2-201ENST00000609038 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
AP000553.2-201ENST00000609038 NKX1-1Q15270 411 aaPredicted RBP17.65■□□□□ 0.42
AP000553.2-201ENST00000609038 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
AP000553.2-201ENST00000609038 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
AP000553.2-201ENST00000609038 RIPK4P57078 832 aa17.64■□□□□ 0.41
AP000553.2-201ENST00000609038 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
AP000553.2-201ENST00000609038 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
AP000553.2-201ENST00000609038 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
AP000553.2-201ENST00000609038 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
AP000553.2-201ENST00000609038 SIPA1L3O60292 1781 aaPredicted RBP17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 IL16Q14005 1332 aa17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 BCL9O00512 1426 aa17.63■□□□□ 0.41
AP000553.2-201ENST00000609038 EXOC5O00471 708 aa17.62■□□□□ 0.41
AP000553.2-201ENST00000609038 PHKG2P15735 406 aa17.62■□□□□ 0.41
AP000553.2-201ENST00000609038 RBM6P78332 1123 aaKnown RBP17.62■□□□□ 0.41
AP000553.2-201ENST00000609038 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
AP000553.2-201ENST00000609038 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
AP000553.2-201ENST00000609038 MRC1P22897 1456 aa17.62■□□□□ 0.41
AP000553.2-201ENST00000609038 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
AP000553.2-201ENST00000609038 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
AP000553.2-201ENST00000609038 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
AP000553.2-201ENST00000609038 CYP27B1O15528 508 aa17.6■□□□□ 0.41
AP000553.2-201ENST00000609038 DDB1Q16531 1140 aa17.6■□□□□ 0.41
AP000553.2-201ENST00000609038 BABAM1Q9NWV8 329 aa17.6■□□□□ 0.41
AP000553.2-201ENST00000609038 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
AP000553.2-201ENST00000609038 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
AP000553.2-201ENST00000609038 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
AP000553.2-201ENST00000609038 FAM98CQ17RN3 349 aaKnown RBP17.58■□□□□ 0.4
AP000553.2-201ENST00000609038 RRP7AQ9Y3A4 280 aaKnown RBP17.58■□□□□ 0.4
AP000553.2-201ENST00000609038 KDM6AO15550 1401 aaPredicted RBP17.57■□□□□ 0.4
AP000553.2-201ENST00000609038 BRWD3Q6RI45 1802 aa17.57■□□□□ 0.4
AP000553.2-201ENST00000609038 TOGARAM1Q9Y4F4 1720 aa17.57■□□□□ 0.4
AP000553.2-201ENST00000609038 ITGB4P16144 1822 aa17.56■□□□□ 0.4
AP000553.2-201ENST00000609038 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
AP000553.2-201ENST00000609038 NEUROD2Q15784 382 aa17.56■□□□□ 0.4
AP000553.2-201ENST00000609038 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
AP000553.2-201ENST00000609038 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
AP000553.2-201ENST00000609038 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
AP000553.2-201ENST00000609038 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
AP000553.2-201ENST00000609038 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
AP000553.2-201ENST00000609038 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
AP000553.2-201ENST00000609038 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
AP000553.2-201ENST00000609038 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
AP000553.2-201ENST00000609038 E9PSI1 815 aa17.54■□□□□ 0.4
AP000553.2-201ENST00000609038 RXRBP28702 533 aa17.54■□□□□ 0.4
AP000553.2-201ENST00000609038 SEPT12Q8IYM1 358 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms