RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
ITGB5-212ENST00000608657 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
ITGB5-212ENST00000608657 CDCA7Q9BWT1 371 aaPredicted RBP11.8□□□□□ -0.52
ITGB5-212ENST00000608657 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
ITGB5-212ENST00000608657 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
ITGB5-212ENST00000608657 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
ITGB5-212ENST00000608657 PLEKHG2Q9H7P9 1386 aa11.78□□□□□ -0.52
ITGB5-212ENST00000608657 TNS2Q63HR2 1409 aa11.77□□□□□ -0.52
ITGB5-212ENST00000608657 FCHSD2O94868 740 aa11.77□□□□□ -0.53
ITGB5-212ENST00000608657 NEFMP07197 916 aa11.77□□□□□ -0.53
ITGB5-212ENST00000608657 PRKAR2BP31323 418 aa11.77□□□□□ -0.53
ITGB5-212ENST00000608657 RSPH6AQ9H0K4 717 aa11.77□□□□□ -0.53
ITGB5-212ENST00000608657 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
ITGB5-212ENST00000608657 RGS12O14924 1447 aa11.77□□□□□ -0.53
ITGB5-212ENST00000608657 DDB1Q16531 1140 aa11.76□□□□□ -0.53
ITGB5-212ENST00000608657 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
ITGB5-212ENST00000608657 FAM9BQ8IZU0 186 aa11.76□□□□□ -0.53
ITGB5-212ENST00000608657 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
ITGB5-212ENST00000608657 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
ITGB5-212ENST00000608657 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
ITGB5-212ENST00000608657 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
ITGB5-212ENST00000608657 ZCRB1Q8TBF4 217 aaKnown RBP11.75□□□□□ -0.53
ITGB5-212ENST00000608657 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
ITGB5-212ENST00000608657 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
ITGB5-212ENST00000608657 EXOC5O00471 708 aa11.74□□□□□ -0.53
ITGB5-212ENST00000608657 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
ITGB5-212ENST00000608657 SPG7Q9UQ90 795 aa11.74□□□□□ -0.53
ITGB5-212ENST00000608657 PCDH11XQ9BZA7 1347 aa11.74□□□□□ -0.53
ITGB5-212ENST00000608657 PCDH11YQ9BZA8 1340 aa11.74□□□□□ -0.53
ITGB5-212ENST00000608657 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
ITGB5-212ENST00000608657 PDE3BQ13370 1112 aa11.73□□□□□ -0.53
ITGB5-212ENST00000608657 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
ITGB5-212ENST00000608657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.73□□□□□ -0.53
ITGB5-212ENST00000608657 NEFLP07196 543 aa11.72□□□□□ -0.53
ITGB5-212ENST00000608657 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
ITGB5-212ENST00000608657 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
ITGB5-212ENST00000608657 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
ITGB5-212ENST00000608657 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
ITGB5-212ENST00000608657 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.53
ITGB5-212ENST00000608657 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
ITGB5-212ENST00000608657 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.53
ITGB5-212ENST00000608657 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
ITGB5-212ENST00000608657 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
ITGB5-212ENST00000608657 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
ITGB5-212ENST00000608657 SCN11AQ9UI33 1791 aa11.7□□□□□ -0.54
ITGB5-212ENST00000608657 IFNL2Q8IZJ0 200 aa11.7□□□□□ -0.54
ITGB5-212ENST00000608657 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
ITGB5-212ENST00000608657 CYP27B1O15528 508 aa11.69□□□□□ -0.54
ITGB5-212ENST00000608657 PHKG2P15735 406 aa11.69□□□□□ -0.54
ITGB5-212ENST00000608657 AKAP4Q5JQC9 854 aa11.69□□□□□ -0.54
ITGB5-212ENST00000608657 MARCH10Q8NA82 808 aaPredicted RBP11.69□□□□□ -0.54
ITGB5-212ENST00000608657 SBF2Q86WG5 1849 aa11.69□□□□□ -0.54
ITGB5-212ENST00000608657 KAT6BQ8WYB5 2073 aa11.69□□□□□ -0.54
ITGB5-212ENST00000608657 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
ITGB5-212ENST00000608657 HSP90AB1P08238 724 aaKnown RBP11.68□□□□□ -0.54
ITGB5-212ENST00000608657 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
ITGB5-212ENST00000608657 ADAMTS7Q9UKP4 1686 aa11.68□□□□□ -0.54
ITGB5-212ENST00000608657 ITGB4P16144 1822 aa11.67□□□□□ -0.54
ITGB5-212ENST00000608657 GNAT3A8MTJ3 354 aa11.67□□□□□ -0.54
ITGB5-212ENST00000608657 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
ITGB5-212ENST00000608657 NHSQ6T4R5 1651 aa11.67□□□□□ -0.54
ITGB5-212ENST00000608657 APAF1O14727 1248 aa11.66□□□□□ -0.54
ITGB5-212ENST00000608657 TMPOP42166 694 aaKnown RBP11.66□□□□□ -0.54
ITGB5-212ENST00000608657 RIPK4P57078 832 aa11.66□□□□□ -0.54
ITGB5-212ENST00000608657 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
ITGB5-212ENST00000608657 FAM182BQ5T319 152 aa11.66□□□□□ -0.54
ITGB5-212ENST00000608657 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
ITGB5-212ENST00000608657 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
ITGB5-212ENST00000608657 KDM6AO15550 1401 aaPredicted RBP11.66□□□□□ -0.54
ITGB5-212ENST00000608657 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
ITGB5-212ENST00000608657 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
ITGB5-212ENST00000608657 FAM196AQ6ZSG2 479 aa11.65□□□□□ -0.54
ITGB5-212ENST00000608657 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
ITGB5-212ENST00000608657 BCL9O00512 1426 aa11.65□□□□□ -0.54
ITGB5-212ENST00000608657 SENP3-EIF4A1A0A087X0R7 540 aa11.64□□□□□ -0.55
ITGB5-212ENST00000608657 HTATSF1O43719 755 aaKnown RBP11.64□□□□□ -0.55
ITGB5-212ENST00000608657 ACSBG1Q96GR2 724 aa11.64□□□□□ -0.55
ITGB5-212ENST00000608657 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
ITGB5-212ENST00000608657 MRC1P22897 1456 aa11.63□□□□□ -0.55
ITGB5-212ENST00000608657 BTAF1O14981 1849 aa11.63□□□□□ -0.55
ITGB5-212ENST00000608657 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
ITGB5-212ENST00000608657 SYTL4Q96C24 671 aaPredicted RBP11.63□□□□□ -0.55
ITGB5-212ENST00000608657 TNS1Q9HBL0 1735 aaKnown RBP11.63□□□□□ -0.55
ITGB5-212ENST00000608657 CABP4P57796 275 aa11.62□□□□□ -0.55
ITGB5-212ENST00000608657 TEFQ10587 303 aa11.62□□□□□ -0.55
ITGB5-212ENST00000608657 MCM10Q7L590 875 aa11.62□□□□□ -0.55
ITGB5-212ENST00000608657 ERVV-2B6SEH9 535 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 IL17REQ8NFR9 667 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 LGR6Q9HBX8 967 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 TMOD3Q9NYL9 352 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
ITGB5-212ENST00000608657 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
ITGB5-212ENST00000608657 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
ITGB5-212ENST00000608657 PRIM1P49642 420 aaKnown RBP11.6□□□□□ -0.55
ITGB5-212ENST00000608657 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
ITGB5-212ENST00000608657 CCDC27Q2M243 656 aa11.6□□□□□ -0.55
ITGB5-212ENST00000608657 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
ITGB5-212ENST00000608657 SLC52A2Q9HAB3 445 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms