RNA–Protein interactions for RNA: ENST00000608307.5

LINC00635-218, long intergenic non-protein coding RNA 635, humanhuman

TSL 5

Gene LINC00635, Length 501 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-218ENST00000608307 USP35Q9P2H5 1018 aa11.96□□□□□ -0.49
LINC00635-218ENST00000608307 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
LINC00635-218ENST00000608307 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00635-218ENST00000608307 DDB1Q16531 1140 aa11.95□□□□□ -0.5
LINC00635-218ENST00000608307 AMOTQ4VCS5 1084 aa11.95□□□□□ -0.5
LINC00635-218ENST00000608307 MEGF6O75095 1541 aa11.95□□□□□ -0.5
LINC00635-218ENST00000608307 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 CCER2I3L3R5 266 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 EXOC5O00471 708 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 FCHSD2O94868 740 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 BCL9O00512 1426 aa11.94□□□□□ -0.5
LINC00635-218ENST00000608307 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
LINC00635-218ENST00000608307 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00635-218ENST00000608307 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
LINC00635-218ENST00000608307 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
LINC00635-218ENST00000608307 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
LINC00635-218ENST00000608307 BRWD3Q6RI45 1802 aa11.93□□□□□ -0.5
LINC00635-218ENST00000608307 SHANK3Q9BYB0 1731 aa11.92□□□□□ -0.5
LINC00635-218ENST00000608307 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
LINC00635-218ENST00000608307 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
LINC00635-218ENST00000608307 KRT27Q7Z3Y8 459 aa11.91□□□□□ -0.5
LINC00635-218ENST00000608307 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
LINC00635-218ENST00000608307 ZCRB1Q8TBF4 217 aaKnown RBP11.91□□□□□ -0.5
LINC00635-218ENST00000608307 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
LINC00635-218ENST00000608307 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.5
LINC00635-218ENST00000608307 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
LINC00635-218ENST00000608307 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
LINC00635-218ENST00000608307 EP400Q96L91 3159 aa11.89□□□□□ -0.51
LINC00635-218ENST00000608307 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
LINC00635-218ENST00000608307 HMOX1P09601 288 aa11.88□□□□□ -0.51
LINC00635-218ENST00000608307 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
LINC00635-218ENST00000608307 FAM196AQ6ZSG2 479 aa11.88□□□□□ -0.51
LINC00635-218ENST00000608307 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
LINC00635-218ENST00000608307 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
LINC00635-218ENST00000608307 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
LINC00635-218ENST00000608307 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
LINC00635-218ENST00000608307 DOT1LQ8TEK3 1739 aa11.86□□□□□ -0.51
LINC00635-218ENST00000608307 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
LINC00635-218ENST00000608307 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
LINC00635-218ENST00000608307 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
LINC00635-218ENST00000608307 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
LINC00635-218ENST00000608307 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
LINC00635-218ENST00000608307 PHKG2P15735 406 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 NKX1-1Q15270 411 aaPredicted RBP11.85□□□□□ -0.51
LINC00635-218ENST00000608307 CCDC125Q86Z20 511 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 PNISRQ8TF01 805 aaKnown RBP11.85□□□□□ -0.51
LINC00635-218ENST00000608307 RUNDC1Q96C34 613 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 SBF2Q86WG5 1849 aa11.85□□□□□ -0.51
LINC00635-218ENST00000608307 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
LINC00635-218ENST00000608307 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
LINC00635-218ENST00000608307 MRC1P22897 1456 aa11.83□□□□□ -0.52
LINC00635-218ENST00000608307 GNAT3A8MTJ3 354 aa11.83□□□□□ -0.52
LINC00635-218ENST00000608307 CYP27B1O15528 508 aa11.83□□□□□ -0.52
LINC00635-218ENST00000608307 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
LINC00635-218ENST00000608307 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
LINC00635-218ENST00000608307 PLEKHF1Q96S99 279 aa11.83□□□□□ -0.52
LINC00635-218ENST00000608307 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
LINC00635-218ENST00000608307 VIRMAQ69YN4 1812 aaKnown RBP11.83□□□□□ -0.52
LINC00635-218ENST00000608307 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
LINC00635-218ENST00000608307 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
LINC00635-218ENST00000608307 NFE2L2Q16236 605 aa11.82□□□□□ -0.52
LINC00635-218ENST00000608307 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
LINC00635-218ENST00000608307 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
LINC00635-218ENST00000608307 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
LINC00635-218ENST00000608307 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
LINC00635-218ENST00000608307 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
LINC00635-218ENST00000608307 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
LINC00635-218ENST00000608307 MIER1Q8N108 512 aa11.8□□□□□ -0.52
LINC00635-218ENST00000608307 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
LINC00635-218ENST00000608307 ITGB4P16144 1822 aa11.8□□□□□ -0.52
LINC00635-218ENST00000608307 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
LINC00635-218ENST00000608307 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
LINC00635-218ENST00000608307 CCDC184Q52MB2 194 aa11.79□□□□□ -0.52
LINC00635-218ENST00000608307 PHACTR3Q96KR7 559 aa11.79□□□□□ -0.52
LINC00635-218ENST00000608307 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
LINC00635-218ENST00000608307 BTAF1O14981 1849 aa11.79□□□□□ -0.52
LINC00635-218ENST00000608307 TMPOP42166 694 aaKnown RBP11.78□□□□□ -0.52
LINC00635-218ENST00000608307 TEFQ10587 303 aa11.78□□□□□ -0.52
LINC00635-218ENST00000608307 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
LINC00635-218ENST00000608307 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
LINC00635-218ENST00000608307 PAPPAQ13219 1627 aa11.78□□□□□ -0.52
LINC00635-218ENST00000608307 ZNF831Q5JPB2 1677 aa11.78□□□□□ -0.52
LINC00635-218ENST00000608307 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
LINC00635-218ENST00000608307 BAG6P46379 1132 aa11.77□□□□□ -0.53
LINC00635-218ENST00000608307 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
LINC00635-218ENST00000608307 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
LINC00635-218ENST00000608307 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
LINC00635-218ENST00000608307 RIPK4P57078 832 aa11.76□□□□□ -0.53
LINC00635-218ENST00000608307 CABP4P57796 275 aa11.76□□□□□ -0.53
LINC00635-218ENST00000608307 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
LINC00635-218ENST00000608307 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
LINC00635-218ENST00000608307 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms