RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 YBX3P16989 372 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTSA-212ENST00000606394 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
CTSA-212ENST00000606394 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
CTSA-212ENST00000606394 NSD2O96028 1365 aa18.96■□□□□ 0.63
CTSA-212ENST00000606394 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
CTSA-212ENST00000606394 PUS7Q96PZ0 661 aaKnown RBP18.95■□□□□ 0.62
CTSA-212ENST00000606394 CCNL1Q9UK58 526 aaPredicted RBP18.95■□□□□ 0.62
CTSA-212ENST00000606394 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
CTSA-212ENST00000606394 KCNQ4P56696 695 aa18.94■□□□□ 0.62
CTSA-212ENST00000606394 ATP10DQ9P241 1426 aa18.93■□□□□ 0.62
CTSA-212ENST00000606394 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
CTSA-212ENST00000606394 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
CTSA-212ENST00000606394 CD2APQ9Y5K6 639 aa18.93■□□□□ 0.62
CTSA-212ENST00000606394 USP47Q96K76 1375 aa18.93■□□□□ 0.62
CTSA-212ENST00000606394 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
CTSA-212ENST00000606394 FLAD1Q8NFF5 587 aa18.92■□□□□ 0.62
CTSA-212ENST00000606394 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
CTSA-212ENST00000606394 A0A1W2PP64 1363 aa18.92■□□□□ 0.62
CTSA-212ENST00000606394 MSH5O43196 834 aa18.91■□□□□ 0.62
CTSA-212ENST00000606394 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
CTSA-212ENST00000606394 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
CTSA-212ENST00000606394 GPBP1L1Q9HC44 474 aaPredicted RBP18.9■□□□□ 0.62
CTSA-212ENST00000606394 HOXC9P31274 260 aa18.89■□□□□ 0.61
CTSA-212ENST00000606394 ADCY9O60503 1353 aa18.89■□□□□ 0.61
CTSA-212ENST00000606394 HSPA6P17066 643 aa18.88■□□□□ 0.61
CTSA-212ENST00000606394 COG3Q96JB2 828 aa18.88■□□□□ 0.61
CTSA-212ENST00000606394 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
CTSA-212ENST00000606394 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
CTSA-212ENST00000606394 MEGF6O75095 1541 aa18.87■□□□□ 0.61
CTSA-212ENST00000606394 AMPHP49418 695 aa18.87■□□□□ 0.61
CTSA-212ENST00000606394 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
CTSA-212ENST00000606394 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
CTSA-212ENST00000606394 MSL1Q68DK7 614 aa18.85■□□□□ 0.61
CTSA-212ENST00000606394 C5P01031 1676 aa18.85■□□□□ 0.61
CTSA-212ENST00000606394 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
CTSA-212ENST00000606394 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
CTSA-212ENST00000606394 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
CTSA-212ENST00000606394 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
CTSA-212ENST00000606394 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
CTSA-212ENST00000606394 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
CTSA-212ENST00000606394 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
CTSA-212ENST00000606394 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
CTSA-212ENST00000606394 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
CTSA-212ENST00000606394 PALLDQ8WX93 1383 aa18.81■□□□□ 0.6
CTSA-212ENST00000606394 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
CTSA-212ENST00000606394 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
CTSA-212ENST00000606394 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
CTSA-212ENST00000606394 SMARCC1Q92922 1105 aaPredicted RBP18.79■□□□□ 0.6
CTSA-212ENST00000606394 C4BP0C0L5 1744 aa18.77■□□□□ 0.6
CTSA-212ENST00000606394 IGSF1Q8N6C5 1336 aa18.77■□□□□ 0.6
CTSA-212ENST00000606394 ZNF526Q8TF50 670 aaPredicted RBP18.77■□□□□ 0.6
CTSA-212ENST00000606394 AK7Q96M32 723 aa18.77■□□□□ 0.6
CTSA-212ENST00000606394 FBLN1P23142 703 aa18.76■□□□□ 0.59
CTSA-212ENST00000606394 SSFA2P28290 1259 aa18.75■□□□□ 0.59
CTSA-212ENST00000606394 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
CTSA-212ENST00000606394 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
CTSA-212ENST00000606394 INSRP06213 1382 aa18.74■□□□□ 0.59
CTSA-212ENST00000606394 KIF3CO14782 793 aa18.74■□□□□ 0.59
CTSA-212ENST00000606394 RRS1Q15050 365 aaKnown RBP18.74■□□□□ 0.59
CTSA-212ENST00000606394 TESK2Q96S53 571 aa18.74■□□□□ 0.59
CTSA-212ENST00000606394 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
CTSA-212ENST00000606394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.73■□□□□ 0.59
CTSA-212ENST00000606394 APLP1P51693 650 aa18.73■□□□□ 0.59
CTSA-212ENST00000606394 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
CTSA-212ENST00000606394 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
CTSA-212ENST00000606394 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
CTSA-212ENST00000606394 FYB1O15117 783 aa18.72■□□□□ 0.59
CTSA-212ENST00000606394 CYP27B1O15528 508 aa18.72■□□□□ 0.59
CTSA-212ENST00000606394 FLT4P35916 1363 aa18.71■□□□□ 0.59
CTSA-212ENST00000606394 ITGB4P16144 1822 aa18.7■□□□□ 0.58
CTSA-212ENST00000606394 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
CTSA-212ENST00000606394 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
CTSA-212ENST00000606394 PHF14O94880 888 aa18.69■□□□□ 0.58
CTSA-212ENST00000606394 HSP90AB2PQ58FF8 381 aa18.69■□□□□ 0.58
CTSA-212ENST00000606394 PIGBQ92521 554 aa18.69■□□□□ 0.58
CTSA-212ENST00000606394 ST20-MTHFSA0A0A6YYL1 179 aa18.68■□□□□ 0.58
CTSA-212ENST00000606394 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
CTSA-212ENST00000606394 TOMM70O94826 608 aa18.68■□□□□ 0.58
CTSA-212ENST00000606394 SIK1P57059 783 aa18.68■□□□□ 0.58
CTSA-212ENST00000606394 PKD1L3Q7Z443 1732 aa18.68■□□□□ 0.58
CTSA-212ENST00000606394 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
CTSA-212ENST00000606394 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
CTSA-212ENST00000606394 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
CTSA-212ENST00000606394 TGFB2P61812 414 aa18.66■□□□□ 0.58
CTSA-212ENST00000606394 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
CTSA-212ENST00000606394 KIF13BQ9NQT8 1826 aa18.65■□□□□ 0.58
CTSA-212ENST00000606394 DNAJC5GQ8N7S2 189 aa18.65■□□□□ 0.58
CTSA-212ENST00000606394 LINC00116Q8NCU8 138 aa18.65■□□□□ 0.58
CTSA-212ENST00000606394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
CTSA-212ENST00000606394 WWC3Q9ULE0 1092 aa18.65■□□□□ 0.58
CTSA-212ENST00000606394 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
CTSA-212ENST00000606394 PXDNLA1KZ92 1463 aa18.64■□□□□ 0.57
CTSA-212ENST00000606394 GNPATO15228 680 aa18.63■□□□□ 0.57
CTSA-212ENST00000606394 MMP10P09238 476 aa18.63■□□□□ 0.57
CTSA-212ENST00000606394 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
CTSA-212ENST00000606394 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
CTSA-212ENST00000606394 NLGN1Q8N2Q7 840 aa18.62■□□□□ 0.57
CTSA-212ENST00000606394 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
CTSA-212ENST00000606394 TMF1P82094 1093 aa18.61■□□□□ 0.57
CTSA-212ENST00000606394 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms