RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 USHBP1Q8N6Y0 703 aa19.19■□□□□ 0.66
CTSA-211ENST00000606066 TATP17735 454 aaPredicted RBP19.17■□□□□ 0.66
CTSA-211ENST00000606066 SPON1Q9HCB6 807 aa19.16■□□□□ 0.66
CTSA-211ENST00000606066 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
CTSA-211ENST00000606066 KCNQ2O43526 872 aa19.15■□□□□ 0.66
CTSA-211ENST00000606066 PRKRIP1Q9H875 184 aaPredicted RBP19.15■□□□□ 0.66
CTSA-211ENST00000606066 NUDCQ9Y266 331 aa19.15■□□□□ 0.66
CTSA-211ENST00000606066 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
CTSA-211ENST00000606066 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
CTSA-211ENST00000606066 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
CTSA-211ENST00000606066 BCL11BQ9C0K0 894 aaPredicted RBP19.13■□□□□ 0.65
CTSA-211ENST00000606066 TNS1Q9HBL0 1735 aaKnown RBP19.12■□□□□ 0.65
CTSA-211ENST00000606066 PARP4Q9UKK3 1724 aaKnown RBP19.12■□□□□ 0.65
CTSA-211ENST00000606066 TNS2Q63HR2 1409 aa19.12■□□□□ 0.65
CTSA-211ENST00000606066 SULT6B1Q6IMI4 303 aa19.12■□□□□ 0.65
CTSA-211ENST00000606066 OVOS2A0A0G2JMS6 1433 aa19.11■□□□□ 0.65
CTSA-211ENST00000606066 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
CTSA-211ENST00000606066 ANP32CO43423 234 aa19.11■□□□□ 0.65
CTSA-211ENST00000606066 MEGF6O75095 1541 aa19.1■□□□□ 0.65
CTSA-211ENST00000606066 PLEKHG2Q9H7P9 1386 aa19.1■□□□□ 0.65
CTSA-211ENST00000606066 MARCH10Q8NA82 808 aaPredicted RBP19.1■□□□□ 0.65
CTSA-211ENST00000606066 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
CTSA-211ENST00000606066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.1■□□□□ 0.65
CTSA-211ENST00000606066 SPG7Q9UQ90 795 aa19.1■□□□□ 0.65
CTSA-211ENST00000606066 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
CTSA-211ENST00000606066 BCL9O00512 1426 aa19.09■□□□□ 0.65
CTSA-211ENST00000606066 PROM2Q8N271 834 aa19.09■□□□□ 0.65
CTSA-211ENST00000606066 PPP1R1BQ9UD71 204 aaPredicted RBP19.09■□□□□ 0.65
CTSA-211ENST00000606066 LRRC37A3O60309 1634 aa19.09■□□□□ 0.65
CTSA-211ENST00000606066 KDRP35968 1356 aa19.08■□□□□ 0.65
CTSA-211ENST00000606066 YY1P25490 414 aa19.08■□□□□ 0.64
CTSA-211ENST00000606066 AEBP1Q8IUX7 1158 aa19.08■□□□□ 0.64
CTSA-211ENST00000606066 WNK3Q9BYP7 1800 aa19.07■□□□□ 0.64
CTSA-211ENST00000606066 PCDH11XQ9BZA7 1347 aa19.07■□□□□ 0.64
CTSA-211ENST00000606066 PCDH11YQ9BZA8 1340 aa19.07■□□□□ 0.64
CTSA-211ENST00000606066 RGPD2P0DJD1 1756 aa19.07■□□□□ 0.64
CTSA-211ENST00000606066 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
CTSA-211ENST00000606066 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
CTSA-211ENST00000606066 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
CTSA-211ENST00000606066 HMOX1P09601 288 aa19.06■□□□□ 0.64
CTSA-211ENST00000606066 U2AF1L5P0DN76 240 aaPredicted RBP19.05■□□□□ 0.64
CTSA-211ENST00000606066 U2AF1Q01081 240 aaKnown RBP eCLIP19.05■□□□□ 0.64
CTSA-211ENST00000606066 PTF1AQ7RTS3 328 aa19.05■□□□□ 0.64
CTSA-211ENST00000606066 IFNL2Q8IZJ0 200 aa19.03■□□□□ 0.64
CTSA-211ENST00000606066 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
CTSA-211ENST00000606066 FCHSD2O94868 740 aa19.02■□□□□ 0.64
CTSA-211ENST00000606066 CYP27B1O15528 508 aa19.01■□□□□ 0.63
CTSA-211ENST00000606066 PNNQ9H307 717 aaKnown RBP19.01■□□□□ 0.63
CTSA-211ENST00000606066 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
CTSA-211ENST00000606066 RREB1Q92766 1687 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 NEFMP07197 916 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 PHKG2P15735 406 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 TXNRD1Q16881 649 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
CTSA-211ENST00000606066 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 UTRNP46939 3433 aa18.99■□□□□ 0.63
CTSA-211ENST00000606066 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
CTSA-211ENST00000606066 PTGER2P43116 358 aa18.98■□□□□ 0.63
CTSA-211ENST00000606066 WDR43Q15061 677 aaKnown RBP eCLIP18.98■□□□□ 0.63
CTSA-211ENST00000606066 NKX1-1Q15270 411 aaPredicted RBP18.98■□□□□ 0.63
CTSA-211ENST00000606066 PDGFDQ9GZP0 370 aaPredicted RBP18.98■□□□□ 0.63
CTSA-211ENST00000606066 SLC15A2Q16348 729 aa18.97■□□□□ 0.63
CTSA-211ENST00000606066 GAS2L2Q8NHY3 880 aa18.97■□□□□ 0.63
CTSA-211ENST00000606066 ACSBG1Q96GR2 724 aa18.97■□□□□ 0.63
CTSA-211ENST00000606066 STK32BQ9NY57 414 aa18.97■□□□□ 0.63
CTSA-211ENST00000606066 NUP188Q5SRE5 1749 aa18.96■□□□□ 0.63
CTSA-211ENST00000606066 PKD1L3Q7Z443 1732 aa18.95■□□□□ 0.62
CTSA-211ENST00000606066 ZBTB7AO95365 584 aa18.95■□□□□ 0.62
CTSA-211ENST00000606066 MTHFSDQ2M296 383 aaKnown RBP18.95■□□□□ 0.62
CTSA-211ENST00000606066 AKAP4Q5JQC9 854 aa18.95■□□□□ 0.62
CTSA-211ENST00000606066 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
CTSA-211ENST00000606066 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
CTSA-211ENST00000606066 DCAF5Q96JK2 942 aa18.94■□□□□ 0.62
CTSA-211ENST00000606066 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
CTSA-211ENST00000606066 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
CTSA-211ENST00000606066 MTFR1LQ9H019 292 aa18.92■□□□□ 0.62
CTSA-211ENST00000606066 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
CTSA-211ENST00000606066 ATF5Q9Y2D1 282 aaPredicted RBP18.92■□□□□ 0.62
CTSA-211ENST00000606066 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
CTSA-211ENST00000606066 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
CTSA-211ENST00000606066 SYT17Q9BSW7 474 aa18.91■□□□□ 0.62
CTSA-211ENST00000606066 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
CTSA-211ENST00000606066 ERVV-2B6SEH9 535 aa18.9■□□□□ 0.62
CTSA-211ENST00000606066 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
CTSA-211ENST00000606066 MPRIPQ6WCQ1 1025 aa18.89■□□□□ 0.61
CTSA-211ENST00000606066 PLEKHF1Q96S99 279 aa18.89■□□□□ 0.61
CTSA-211ENST00000606066 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
CTSA-211ENST00000606066 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
CTSA-211ENST00000606066 FHDC1Q9C0D6 1143 aaPredicted RBP18.88■□□□□ 0.61
CTSA-211ENST00000606066 RGPD3A6NKT7 1758 aaPredicted RBP18.88■□□□□ 0.61
CTSA-211ENST00000606066 RGPD4Q7Z3J3 1758 aa18.88■□□□□ 0.61
CTSA-211ENST00000606066 CABP4P57796 275 aa18.87■□□□□ 0.61
CTSA-211ENST00000606066 CCDC184Q52MB2 194 aa18.87■□□□□ 0.61
CTSA-211ENST00000606066 RTF1Q92541 710 aaKnown RBP18.87■□□□□ 0.61
CTSA-211ENST00000606066 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
CTSA-211ENST00000606066 NHSQ6T4R5 1651 aa18.86■□□□□ 0.61
CTSA-211ENST00000606066 RUNDC1Q96C34 613 aa18.86■□□□□ 0.61
CTSA-211ENST00000606066 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
CTSA-211ENST00000606066 HTATSF1O43719 755 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms