RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 PHRF1Q9P1Y6 1649 aaKnown RBP24.7■■□□□ 1.54
TUBB4B-202ENST00000604929 VAMP4O75379 141 aa24.69■■□□□ 1.54
TUBB4B-202ENST00000604929 COG6Q9Y2V7 657 aa24.69■■□□□ 1.54
TUBB4B-202ENST00000604929 CHL1O00533 1208 aa24.68■■□□□ 1.54
TUBB4B-202ENST00000604929 TCERG1O14776 1098 aaKnown RBP24.67■■□□□ 1.54
TUBB4B-202ENST00000604929 TWISTNBQ3B726 338 aaPredicted RBP24.67■■□□□ 1.54
TUBB4B-202ENST00000604929 ERBB3P21860 1342 aa24.67■■□□□ 1.54
TUBB4B-202ENST00000604929 RLBP1P12271 317 aa24.66■■□□□ 1.54
TUBB4B-202ENST00000604929 NOB1Q9ULX3 412 aaKnown RBP24.66■■□□□ 1.54
TUBB4B-202ENST00000604929 RGPD5Q99666 1765 aa24.66■■□□□ 1.54
TUBB4B-202ENST00000604929 KIAA0232Q92628 1395 aa24.66■■□□□ 1.54
TUBB4B-202ENST00000604929 HAP1P54257 671 aaPredicted RBP24.66■■□□□ 1.54
TUBB4B-202ENST00000604929 KRT24Q2M2I5 525 aa24.66■■□□□ 1.54
TUBB4B-202ENST00000604929 CRB1P82279 1406 aa24.65■■□□□ 1.54
TUBB4B-202ENST00000604929 ZKSCAN2Q63HK3 967 aa24.65■■□□□ 1.54
TUBB4B-202ENST00000604929 IL17REQ8NFR9 667 aa24.65■■□□□ 1.54
TUBB4B-202ENST00000604929 NLRP2Q9NX02 1062 aa24.65■■□□□ 1.54
TUBB4B-202ENST00000604929 HTATSF1O43719 755 aaKnown RBP24.64■■□□□ 1.54
TUBB4B-202ENST00000604929 CSB-PGBD3P0DP91 1061 aa24.64■■□□□ 1.54
TUBB4B-202ENST00000604929 ALDH1L2Q3SY69 923 aa24.62■■□□□ 1.53
TUBB4B-202ENST00000604929 MAP3K5Q99683 1374 aa24.62■■□□□ 1.53
TUBB4B-202ENST00000604929 TSPYL4Q9UJ04 414 aa24.62■■□□□ 1.53
TUBB4B-202ENST00000604929 PLEKHO1Q53GL0 409 aaPredicted RBP24.61■■□□□ 1.53
TUBB4B-202ENST00000604929 TRIM27P14373 513 aa24.6■■□□□ 1.53
TUBB4B-202ENST00000604929 FTSJ3Q8IY81 847 aaKnown RBP24.6■■□□□ 1.53
TUBB4B-202ENST00000604929 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
TUBB4B-202ENST00000604929 PRDM11Q9NQV5 511 aa24.6■■□□□ 1.53
TUBB4B-202ENST00000604929 ZNF530Q6P9A1 599 aaPredicted RBP24.59■■□□□ 1.53
TUBB4B-202ENST00000604929 DZIP1LQ8IYY4 767 aaKnown RBP24.59■■□□□ 1.53
TUBB4B-202ENST00000604929 LGR6Q9HBX8 967 aa24.59■■□□□ 1.53
TUBB4B-202ENST00000604929 ATF7IPQ6VMQ6 1270 aa24.59■■□□□ 1.53
TUBB4B-202ENST00000604929 AMOTQ4VCS5 1084 aa24.57■■□□□ 1.52
TUBB4B-202ENST00000604929 MRPL50Q8N5N7 158 aaKnown RBP24.57■■□□□ 1.52
TUBB4B-202ENST00000604929 CPDO75976 1380 aa24.57■■□□□ 1.52
TUBB4B-202ENST00000604929 IPO8O15397 1037 aaKnown RBP24.56■■□□□ 1.52
TUBB4B-202ENST00000604929 MPRIPQ6WCQ1 1025 aa24.56■■□□□ 1.52
TUBB4B-202ENST00000604929 COL18A1P39060 1754 aa24.56■■□□□ 1.52
TUBB4B-202ENST00000604929 TSHZ2Q9NRE2 1034 aa24.56■■□□□ 1.52
TUBB4B-202ENST00000604929 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
TUBB4B-202ENST00000604929 KIF16BQ96L93 1317 aa24.55■■□□□ 1.52
TUBB4B-202ENST00000604929 TAF7Q15545 349 aaPredicted RBP24.55■■□□□ 1.52
TUBB4B-202ENST00000604929 AKAP4Q5JQC9 854 aa24.55■■□□□ 1.52
TUBB4B-202ENST00000604929 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
TUBB4B-202ENST00000604929 NCAPD2Q15021 1401 aa24.55■■□□□ 1.52
TUBB4B-202ENST00000604929 LTBP4Q8N2S1 1624 aa24.54■■□□□ 1.52
TUBB4B-202ENST00000604929 C1orf141Q5JVX7 400 aa24.54■■□□□ 1.52
TUBB4B-202ENST00000604929 MS4A1P11836 297 aa24.53■■□□□ 1.52
TUBB4B-202ENST00000604929 MVPQ14764 893 aaKnown RBP24.53■■□□□ 1.52
TUBB4B-202ENST00000604929 BRPF1P55201 1214 aaPredicted RBP24.52■■□□□ 1.52
TUBB4B-202ENST00000604929 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
TUBB4B-202ENST00000604929 ITPRIPQ8IWB1 547 aa24.51■■□□□ 1.51
TUBB4B-202ENST00000604929 TMEM57Q8N5G2 664 aa24.51■■□□□ 1.51
TUBB4B-202ENST00000604929 TATP17735 454 aaPredicted RBP24.5■■□□□ 1.51
TUBB4B-202ENST00000604929 TOM1L2Q6ZVM7 507 aa24.49■■□□□ 1.51
TUBB4B-202ENST00000604929 CEMIPQ8WUJ3 1361 aa24.49■■□□□ 1.51
TUBB4B-202ENST00000604929 ROBO1Q9Y6N7 1651 aa24.48■■□□□ 1.51
TUBB4B-202ENST00000604929 TEFQ10587 303 aa24.48■■□□□ 1.51
TUBB4B-202ENST00000604929 STRN4Q9NRL3 753 aa24.48■■□□□ 1.51
TUBB4B-202ENST00000604929 RNMTO43148 476 aaKnown RBP24.47■■□□□ 1.51
TUBB4B-202ENST00000604929 SKAP1Q86WV1 359 aa24.47■■□□□ 1.51
TUBB4B-202ENST00000604929 CAMTA1Q9Y6Y1 1673 aa24.47■■□□□ 1.51
TUBB4B-202ENST00000604929 IGHDP01880 384 aa24.47■■□□□ 1.51
TUBB4B-202ENST00000604929 KDM2BQ8NHM5 1336 aa24.47■■□□□ 1.51
TUBB4B-202ENST00000604929 PIP4K2BP78356 416 aa24.46■■□□□ 1.51
TUBB4B-202ENST00000604929 SLC4A2P04920 1241 aa24.45■■□□□ 1.51
TUBB4B-202ENST00000604929 EVA1CP58658 441 aa24.45■■□□□ 1.51
TUBB4B-202ENST00000604929 ARHGAP45Q92619 1136 aa24.45■■□□□ 1.51
TUBB4B-202ENST00000604929 PCDHB15Q9Y5E8 787 aa24.45■■□□□ 1.51
TUBB4B-202ENST00000604929 CENPQQ7L2Z9 268 aaPredicted RBP24.45■■□□□ 1.5
TUBB4B-202ENST00000604929 NECTIN2Q92692 538 aa24.45■■□□□ 1.5
TUBB4B-202ENST00000604929 LMO7Q8WWI1 1683 aa24.45■■□□□ 1.5
TUBB4B-202ENST00000604929 WDR17Q8IZU2 1322 aa24.45■■□□□ 1.5
TUBB4B-202ENST00000604929 BABAM1Q9NWV8 329 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 SPG7Q9UQ90 795 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 LRRC37A3O60309 1634 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 MEGF6O75095 1541 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 BTBD11A6QL63 1104 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 KCNQ3O43525 872 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 DDX19BQ9UMR2 479 aa24.44■■□□□ 1.5
TUBB4B-202ENST00000604929 ABCC6O95255 1503 aa24.42■■□□□ 1.5
TUBB4B-202ENST00000604929 LARP1Q6PKG0 1096 aaKnown RBP24.42■■□□□ 1.5
TUBB4B-202ENST00000604929 FAM208AQ9UK61 1670 aaKnown RBP24.41■■□□□ 1.5
TUBB4B-202ENST00000604929 AAMPQ13685 434 aa24.4■■□□□ 1.5
TUBB4B-202ENST00000604929 COL5A2P05997 1499 aaPredicted RBP24.4■■□□□ 1.5
TUBB4B-202ENST00000604929 PHKG2P15735 406 aa24.4■■□□□ 1.5
TUBB4B-202ENST00000604929 USP35Q9P2H5 1018 aa24.4■■□□□ 1.5
TUBB4B-202ENST00000604929 ABCA3Q99758 1704 aa24.4■■□□□ 1.5
TUBB4B-202ENST00000604929 TOM1O60784 492 aa24.39■■□□□ 1.5
TUBB4B-202ENST00000604929 IFNL2Q8IZJ0 200 aa24.39■■□□□ 1.5
TUBB4B-202ENST00000604929 API5Q9BZZ5 524 aaKnown RBP24.39■■□□□ 1.5
TUBB4B-202ENST00000604929 BTG4Q9NY30 223 aa24.39■■□□□ 1.5
TUBB4B-202ENST00000604929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.39■■□□□ 1.5
TUBB4B-202ENST00000604929 EIF4A1P60842 406 aaKnown RBP24.39■■□□□ 1.49
TUBB4B-202ENST00000604929 CYP27B1O15528 508 aa24.38■■□□□ 1.49
TUBB4B-202ENST00000604929 G2E3Q7L622 706 aa24.38■■□□□ 1.49
TUBB4B-202ENST00000604929 CCDC30Q5VVM6 783 aa24.37■■□□□ 1.49
TUBB4B-202ENST00000604929 STK31Q9BXU1 1019 aa24.37■■□□□ 1.49
TUBB4B-202ENST00000604929 EIF2S2P20042 333 aaKnown RBP24.36■■□□□ 1.49
TUBB4B-202ENST00000604929 CARD10Q9BWT7 1032 aa24.36■■□□□ 1.49
TUBB4B-202ENST00000604929 ZBTB40Q9NUA8 1239 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms