RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
SRGAP2-210ENST00000604419 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SRGAP2-210ENST00000604419 PAPPAQ13219 1627 aa13.57□□□□□ -0.24
SRGAP2-210ENST00000604419 TMF1P82094 1093 aa13.57□□□□□ -0.24
SRGAP2-210ENST00000604419 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
SRGAP2-210ENST00000604419 RTL1A6NKG5 1358 aa13.57□□□□□ -0.24
SRGAP2-210ENST00000604419 FYB1O15117 783 aa13.56□□□□□ -0.24
SRGAP2-210ENST00000604419 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
SRGAP2-210ENST00000604419 FBLN1P23142 703 aa13.55□□□□□ -0.24
SRGAP2-210ENST00000604419 GPR162Q16538 588 aa13.55□□□□□ -0.24
SRGAP2-210ENST00000604419 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
SRGAP2-210ENST00000604419 RAPGEF4Q8WZA2 1011 aa13.55□□□□□ -0.24
SRGAP2-210ENST00000604419 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
SRGAP2-210ENST00000604419 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
SRGAP2-210ENST00000604419 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
SRGAP2-210ENST00000604419 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
SRGAP2-210ENST00000604419 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
SRGAP2-210ENST00000604419 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
SRGAP2-210ENST00000604419 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
SRGAP2-210ENST00000604419 USP47Q96K76 1375 aa13.53□□□□□ -0.24
SRGAP2-210ENST00000604419 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
SRGAP2-210ENST00000604419 QSER1Q2KHR3 1735 aa13.51□□□□□ -0.25
SRGAP2-210ENST00000604419 NSD2O96028 1365 aa13.51□□□□□ -0.25
SRGAP2-210ENST00000604419 INSRP06213 1382 aa13.51□□□□□ -0.25
SRGAP2-210ENST00000604419 KCNQ4P56696 695 aa13.51□□□□□ -0.25
SRGAP2-210ENST00000604419 MEGF6O75095 1541 aa13.5□□□□□ -0.25
SRGAP2-210ENST00000604419 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
SRGAP2-210ENST00000604419 FLAD1Q8NFF5 587 aa13.5□□□□□ -0.25
SRGAP2-210ENST00000604419 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 CHD4Q14839 1912 aa13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 GRIN3BO60391 1043 aa13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 HSP90AB2PQ58FF8 381 aa13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
SRGAP2-210ENST00000604419 FLT4P35916 1363 aa13.48□□□□□ -0.25
SRGAP2-210ENST00000604419 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
SRGAP2-210ENST00000604419 LY75O60449 1722 aa13.47□□□□□ -0.25
SRGAP2-210ENST00000604419 COL24A1Q17RW2 1714 aa13.47□□□□□ -0.25
SRGAP2-210ENST00000604419 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
SRGAP2-210ENST00000604419 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
SRGAP2-210ENST00000604419 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
SRGAP2-210ENST00000604419 MPRIPQ6WCQ1 1025 aa13.46□□□□□ -0.25
SRGAP2-210ENST00000604419 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.25
SRGAP2-210ENST00000604419 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 CYP27B1O15528 508 aa13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 CD2APQ9Y5K6 639 aa13.45□□□□□ -0.26
SRGAP2-210ENST00000604419 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
SRGAP2-210ENST00000604419 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
SRGAP2-210ENST00000604419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRGAP2-210ENST00000604419 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
SRGAP2-210ENST00000604419 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
SRGAP2-210ENST00000604419 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
SRGAP2-210ENST00000604419 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
SRGAP2-210ENST00000604419 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
SRGAP2-210ENST00000604419 AK7Q96M32 723 aa13.42□□□□□ -0.26
SRGAP2-210ENST00000604419 EMILIN1Q9Y6C2 1016 aa13.42□□□□□ -0.26
SRGAP2-210ENST00000604419 MSL1Q68DK7 614 aa13.41□□□□□ -0.26
SRGAP2-210ENST00000604419 PIGBQ92521 554 aa13.41□□□□□ -0.26
SRGAP2-210ENST00000604419 TUBGCP6Q96RT7 1819 aa13.41□□□□□ -0.26
SRGAP2-210ENST00000604419 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
SRGAP2-210ENST00000604419 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.266e-6■□□□□ 10.9
SRGAP2-210ENST00000604419 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
SRGAP2-210ENST00000604419 SSFA2P28290 1259 aa13.39□□□□□ -0.27
SRGAP2-210ENST00000604419 IFNL2Q8IZJ0 200 aa13.39□□□□□ -0.27
SRGAP2-210ENST00000604419 EYA1Q99502 592 aa13.39□□□□□ -0.27
SRGAP2-210ENST00000604419 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
SRGAP2-210ENST00000604419 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
SRGAP2-210ENST00000604419 C5P01031 1676 aa13.38□□□□□ -0.27
SRGAP2-210ENST00000604419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
SRGAP2-210ENST00000604419 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
SRGAP2-210ENST00000604419 SIK1P57059 783 aa13.38□□□□□ -0.27
SRGAP2-210ENST00000604419 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
SRGAP2-210ENST00000604419 PLEKHG2Q9H7P9 1386 aa13.37□□□□□ -0.27
SRGAP2-210ENST00000604419 PHKG2P15735 406 aa13.36□□□□□ -0.27
SRGAP2-210ENST00000604419 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
SRGAP2-210ENST00000604419 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
SRGAP2-210ENST00000604419 PHF14O94880 888 aa13.35□□□□□ -0.27
SRGAP2-210ENST00000604419 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
SRGAP2-210ENST00000604419 ASAP1Q9ULH1 1129 aa13.35□□□□□ -0.27
SRGAP2-210ENST00000604419 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
SRGAP2-210ENST00000604419 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
SRGAP2-210ENST00000604419 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
SRGAP2-210ENST00000604419 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
SRGAP2-210ENST00000604419 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
SRGAP2-210ENST00000604419 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
SRGAP2-210ENST00000604419 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
SRGAP2-210ENST00000604419 ITGB4P16144 1822 aa13.34□□□□□ -0.27
SRGAP2-210ENST00000604419 GNPATO15228 680 aa13.33□□□□□ -0.28
SRGAP2-210ENST00000604419 EIF4A2Q14240 407 aaKnown RBP13.33□□□□□ -0.28
SRGAP2-210ENST00000604419 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.28
SRGAP2-210ENST00000604419 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
SRGAP2-210ENST00000604419 ITPK1Q13572 414 aa13.32□□□□□ -0.28
SRGAP2-210ENST00000604419 TRAPPC3LQ5T215 181 aa13.32□□□□□ -0.28
SRGAP2-210ENST00000604419 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms