RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 ZKSCAN5Q9Y2L8 839 aa18.72■□□□□ 0.59
LYSMD4-211ENST00000604213 LMOD3Q0VAK6 560 aa18.71■□□□□ 0.59
LYSMD4-211ENST00000604213 CASC1Q6TDU7 716 aa18.71■□□□□ 0.59
LYSMD4-211ENST00000604213 SLC52A1Q9NWF4 448 aa18.71■□□□□ 0.59
LYSMD4-211ENST00000604213 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
LYSMD4-211ENST00000604213 CEP85Q6P2H3 762 aa18.71■□□□□ 0.59
LYSMD4-211ENST00000604213 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
LYSMD4-211ENST00000604213 RIMS2Q9UQ26 1411 aa18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 MCM5P33992 734 aa18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
LYSMD4-211ENST00000604213 RGS12O14924 1447 aa18.69■□□□□ 0.58
LYSMD4-211ENST00000604213 REC8O95072 547 aa18.69■□□□□ 0.58
LYSMD4-211ENST00000604213 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
LYSMD4-211ENST00000604213 SYCE3A1L190 88 aa18.69■□□□□ 0.58
LYSMD4-211ENST00000604213 ATP7BP35670 1465 aa18.68■□□□□ 0.58
LYSMD4-211ENST00000604213 MAP7D2Q96T17 732 aa18.68■□□□□ 0.58
LYSMD4-211ENST00000604213 TMEM131LA2VDJ0 1609 aa18.68■□□□□ 0.58
LYSMD4-211ENST00000604213 CPSF1Q10570 1443 aaKnown RBP18.68■□□□□ 0.58
LYSMD4-211ENST00000604213 DLG5Q8TDM6 1919 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 ERC2O15083 957 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 CSPP1Q1MSJ5 1256 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 CCDC39Q9UFE4 941 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 UQCRHLA0A096LP55 91 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 UQCRHP07919 91 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 FAM13BQ9NYF5 915 aa18.67■□□□□ 0.58
LYSMD4-211ENST00000604213 APBB1O00213 710 aa18.66■□□□□ 0.58
LYSMD4-211ENST00000604213 ALKQ9UM73 1620 aa18.65■□□□□ 0.58
LYSMD4-211ENST00000604213 MBD3O95983 291 aa18.65■□□□□ 0.58
LYSMD4-211ENST00000604213 MSH6P52701 1360 aa18.64■□□□□ 0.57
LYSMD4-211ENST00000604213 TMX3Q96JJ7 454 aa18.64■□□□□ 0.57
LYSMD4-211ENST00000604213 FOXD4L5Q5VV16 416 aaPredicted RBP18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 NME9Q86XW9 330 aa18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 FOXD4L4Q8WXT5 416 aaPredicted RBP18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 MEIS3Q99687 375 aa18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 BRD1O95696 1058 aa18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
LYSMD4-211ENST00000604213 KRT24Q2M2I5 525 aa18.62■□□□□ 0.57
LYSMD4-211ENST00000604213 OSBPL3Q9H4L5 887 aa18.62■□□□□ 0.57
LYSMD4-211ENST00000604213 DYNC1I1O14576 645 aa18.62■□□□□ 0.57
LYSMD4-211ENST00000604213 NEK4P51957 841 aa18.62■□□□□ 0.57
LYSMD4-211ENST00000604213 DIP2CQ9Y2E4 1556 aa18.61■□□□□ 0.57
LYSMD4-211ENST00000604213 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
LYSMD4-211ENST00000604213 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
LYSMD4-211ENST00000604213 CUL4AQ13619 759 aa18.61■□□□□ 0.57
LYSMD4-211ENST00000604213 RNF214Q8ND24 703 aa18.61■□□□□ 0.57
LYSMD4-211ENST00000604213 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
LYSMD4-211ENST00000604213 PTPRCP08575 1304 aa18.6■□□□□ 0.57
LYSMD4-211ENST00000604213 MCM2P49736 904 aa18.6■□□□□ 0.57
LYSMD4-211ENST00000604213 PDE1AP54750 535 aa18.6■□□□□ 0.57
LYSMD4-211ENST00000604213 WAPLQ7Z5K2 1190 aa18.6■□□□□ 0.57
LYSMD4-211ENST00000604213 HAP1P54257 671 aaPredicted RBP18.6■□□□□ 0.57
LYSMD4-211ENST00000604213 CHL1O00533 1208 aa18.59■□□□□ 0.57
LYSMD4-211ENST00000604213 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
LYSMD4-211ENST00000604213 PREX1Q8TCU6 1659 aa18.59■□□□□ 0.57
LYSMD4-211ENST00000604213 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
LYSMD4-211ENST00000604213 KIAA0232Q92628 1395 aa18.58■□□□□ 0.56
LYSMD4-211ENST00000604213 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
LYSMD4-211ENST00000604213 MTERF4Q7Z6M4 381 aaKnown RBP18.57■□□□□ 0.56
LYSMD4-211ENST00000604213 HMMRO75330 724 aa18.57■□□□□ 0.56
LYSMD4-211ENST00000604213 ESYT1Q9BSJ8 1104 aa18.57■□□□□ 0.56
LYSMD4-211ENST00000604213 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
LYSMD4-211ENST00000604213 PALD1Q9ULE6 856 aa18.56■□□□□ 0.56
LYSMD4-211ENST00000604213 COG3Q96JB2 828 aa18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 AEBP1Q8IUX7 1158 aa18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 SYAP1Q96A49 352 aaPredicted RBP18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 PRDM4Q9UKN5 801 aa18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
LYSMD4-211ENST00000604213 PTMAP06454 111 aaKnown RBP18.54■□□□□ 0.56
LYSMD4-211ENST00000604213 KIAA2012Q0VF49 1180 aa18.54■□□□□ 0.56
LYSMD4-211ENST00000604213 ANAPC15P60006 121 aa18.54■□□□□ 0.56
LYSMD4-211ENST00000604213 CPS1P31327 1500 aa18.54■□□□□ 0.56
LYSMD4-211ENST00000604213 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 MCM10Q7L590 875 aa18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 GADD45BO75293 160 aaPredicted RBP18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 SLC4A2P04920 1241 aa18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 MCCP23508 829 aa18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 IL17RAQ96F46 866 aa18.53■□□□□ 0.56
LYSMD4-211ENST00000604213 NEO1Q92859 1461 aa18.52■□□□□ 0.56
LYSMD4-211ENST00000604213 WASLO00401 505 aaPredicted RBP18.52■□□□□ 0.55
LYSMD4-211ENST00000604213 SULT6B1Q6IMI4 303 aa18.52■□□□□ 0.55
LYSMD4-211ENST00000604213 PHF14O94880 888 aa18.51■□□□□ 0.55
LYSMD4-211ENST00000604213 CHMLP26374 656 aa18.51■□□□□ 0.55
LYSMD4-211ENST00000604213 NOL8Q76FK4 1167 aaKnown RBP18.51■□□□□ 0.55
LYSMD4-211ENST00000604213 EXOC6BQ9Y2D4 811 aa18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 G2E3Q7L622 706 aa18.5■□□□□ 0.55
LYSMD4-211ENST00000604213 USP48Q86UV5 1035 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms